diff --git a/pdebench/data_download/download_direct.py b/pdebench/data_download/download_direct.py index 5cd0ee4..5a87249 100644 --- a/pdebench/data_download/download_direct.py +++ b/pdebench/data_download/download_direct.py @@ -50,9 +50,7 @@ def parse_metadata(pde_names): "3d_cfd", ] - assert all( - name.lower() in pde_list for name in pde_names - ), "PDE name not defined." + assert all(name.lower() in pde_list for name in pde_names), "PDE name not defined." # Filter the files to be downloaded meta_df["PDE"] = meta_df["PDE"].str.lower() diff --git a/pdebench/data_gen/data_gen_NLE/ReactionDiffusionEq/config/args/config_2D.yaml b/pdebench/data_gen/data_gen_NLE/ReactionDiffusionEq/config/args/config_2D.yaml index acd486e..8909062 100644 --- a/pdebench/data_gen/data_gen_NLE/ReactionDiffusionEq/config/args/config_2D.yaml +++ b/pdebench/data_gen/data_gen_NLE/ReactionDiffusionEq/config/args/config_2D.yaml @@ -1,4 +1,4 @@ -save: '../save/ReacDiff/' +save: "../save/ReacDiff/" dt_save: 0.01 ini_time: 0. fin_time: 1. @@ -8,9 +8,9 @@ xL: 0. xR: 6.28318530718 yL: 0. yR: 6.28318530718 -nu : 1.e0 +nu: 1.e0 rho: 1.e0 CFL: 2.5e-1 if_show: 1 show_steps: 100 -init_mode: 'react' +init_mode: "react" diff --git a/pdebench/data_gen/data_gen_NLE/config/config.yaml b/pdebench/data_gen/data_gen_NLE/config/config.yaml index c79ac76..25f1620 100644 --- a/pdebench/data_gen/data_gen_NLE/config/config.yaml +++ b/pdebench/data_gen/data_gen_NLE/config/config.yaml @@ -9,7 +9,7 @@ hydra: dir: . args: - type: 'ReacDiff' # 'advection'/'ReacDiff'/'burgers'/'CFD' + type: "ReacDiff" # "advection"/"ReacDiff"/"burgers"/"CFD" dim: 1 bd: "periodic" nbatch: 1000 diff --git a/pdebench/data_gen/velocity2vorticity.py b/pdebench/data_gen/velocity2vorticity.py index 8181dc4..3081ced 100644 --- a/pdebench/data_gen/velocity2vorticity.py +++ b/pdebench/data_gen/velocity2vorticity.py @@ -92,8 +92,7 @@ def convert_velocity() -> None: [vx[..., None], vy[..., None], vz[..., None]], axis=-1 ) - vorticity = compute_spectral_vorticity_jnp( - jnp.array(velocity), dx, dy, dz) + vorticity = compute_spectral_vorticity_jnp(jnp.array(velocity), dx, dy, dz) outfile["omega_x"][i] = np.array(vorticity[..., 0]) outfile["omega_y"][i] = np.array(vorticity[..., 1]) diff --git a/pdebench/models/fno/train.py b/pdebench/models/fno/train.py index 25a6912..2381c45 100644 --- a/pdebench/models/fno/train.py +++ b/pdebench/models/fno/train.py @@ -6,7 +6,7 @@ import numpy as np import torch -from torch import nn +import torch.nn as nn from pdebench.models.fno.fno import FNO1d, FNO2d, FNO3d from pdebench.models.fno.utils import FNODatasetMult, FNODatasetSingle diff --git a/pdebench/models/fno/utils.py b/pdebench/models/fno/utils.py index a98cbe9..4151a27 100644 --- a/pdebench/models/fno/utils.py +++ b/pdebench/models/fno/utils.py @@ -149,7 +149,6 @@ from __future__ import annotations import math as mt -import os from pathlib import Path import h5py diff --git a/pdebench/models/unet/utils.py b/pdebench/models/unet/utils.py index 4175b10..a39f564 100644 --- a/pdebench/models/unet/utils.py +++ b/pdebench/models/unet/utils.py @@ -149,7 +149,6 @@ from __future__ import annotations import math as mt -import os from pathlib import Path import h5py