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For enhanced functionality and analysis, it would be beneficial to have the option to store the Minimum Spanning Tree (MST) and its condensed version within the HDbscan struct, along with a few new supporting methods. This would be similar to features offered by the python hdbscan library.
Some direct and indirect benefits of storing the MST:
Explore clusterings with different configurations using minimal computation: min_cluster_size is only used when generating the condensed tree.
Analyze and explore the MST to:
visualize data
automate parameter tuning
analyze edge weights and connectivity
compare other MSTs
leverage the MST for other algorithms
Explore the hierarchy of clusters:
this one is perhaps more applicable to the condensed tree.
I've showcased an optional MST storage in a fork; please review the changes here. Let me know if this feature is of interest to you. If so, I can also add in optional storage of the condensed tree and create a PR.
I believe this enhancement can provide more versatility to the library. I hope to collaborate and refine the feature based on feedback.
Thanks for your work on creating this great library, btw!
The text was updated successfully, but these errors were encountered:
For enhanced functionality and analysis, it would be beneficial to have the option to store the Minimum Spanning Tree (MST) and its condensed version within the HDbscan struct, along with a few new supporting methods. This would be similar to features offered by the python hdbscan library.
Some direct and indirect benefits of storing the MST:
min_cluster_size
is only used when generating the condensed tree.I've showcased an optional MST storage in a fork; please review the changes here. Let me know if this feature is of interest to you. If so, I can also add in optional storage of the condensed tree and create a PR.
I believe this enhancement can provide more versatility to the library. I hope to collaborate and refine the feature based on feedback.
Thanks for your work on creating this great library, btw!
The text was updated successfully, but these errors were encountered: