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Dictionary Plant Secondary Metabolites

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Sagar Jadhav edited this page Jun 30, 2021 · 26 revisions

Plant Secondary Metabolites DICTIONARY:

  1. I used wikipedia page (https://en.wikipedia.org/wiki/Secondary_metabolite#Plant_secondary_metabolites) to find out only name of plant secondary metabolites. Most of the Wikidata IDs were searched manually. I also used following SPARQL queries

    SELECT ?instance_of ?instance_ofLabel WHERE {

    SERVICE wikibase:label { bd:serviceParam wikibase:language "[AUTO_LANGUAGE],en". }

    ?instance_of wdt:P31 wd:Q11173.

    ?instance_of wdt:P31 wd:Q331818.}

    (replacing wd:Q331818 with wd:Q70702, wd:Q32528, wd:Q80218, wd:Q3234924 and wd:Q222174)

  2. I searched papers (supplementary data) of genome wide association studies of Arabidopsis and Rice as well as Tomato (Introgression Lines) (Alseekh et al., 2015; Matsuda et al., 2014; Wu et al., 2018).
    (https://academic.oup.com/plcell/article/27/3/485/6118131, https://www.pnas.org/content/110/50/20320, https://onlinelibrary.wiley.com/doi/10.1111/tpj.12681, https://doi.org/10.1016/j.molp.2017.08.012)

  3. Presently, 1285 plant secondary metabolites are in dictionary. Plant secondary metabolites

  4. Here, we are focusing on only plant secondary metabolites. There are natural product databases available. However, they contain microbial natural products also and some such databases require subscription and are not open access.

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