diff --git a/R/VAST_do.R b/R/VAST_do.R index c3c3231..8f08297 100644 --- a/R/VAST_do.R +++ b/R/VAST_do.R @@ -143,6 +143,7 @@ VAST_do <- function(Database, settings, conditiondir, compiledir, error = function(e) e) index <- suppressWarnings(FishStatsUtils::plot_biomass_index( + fit = out, DirName = file.path(conditiondir, .Platform$file.sep), TmbData = out$data_list, Sdreport = out$parameter_estimates$SD, use_biascorr = TRUE,