From 58b403eb7ce3a2a2a632fb4d9056f1ae8492bcf1 Mon Sep 17 00:00:00 2001
From: chantelwetzel-noaa <chantelwetzel-noaa@users.noreply.github.com>
Date: Wed, 13 Nov 2024 15:20:39 +0000
Subject: [PATCH] Built site for nwfscDiag@1.1.2: c3c8d77

---
 articles/nwfscDiag.html | 12 ++++++------
 pkgdown.yml             |  2 +-
 2 files changed, 7 insertions(+), 7 deletions(-)

diff --git a/articles/nwfscDiag.html b/articles/nwfscDiag.html
index 59f4ad6..8620024 100644
--- a/articles/nwfscDiag.html
+++ b/articles/nwfscDiag.html
@@ -69,7 +69,7 @@ <h1 data-toc-skip>nwfscDiag</h1>
                         <h4 data-toc-skip class="author">Chantel
 Wetzel</h4>
             
-            <h4 data-toc-skip class="date">2024-10-17</h4>
+            <h4 data-toc-skip class="date">2024-11-13</h4>
       
       <small class="dont-index">Source: <a href="https://github.com/pfmc-assessments/nwfscDiag/blob/main/vignettes/nwfscDiag.Rmd" class="external-link"><code>vignettes/nwfscDiag.Rmd</code></a></small>
       <div class="hidden name"><code>nwfscDiag.Rmd</code></div>
@@ -132,7 +132,7 @@ <h3 id="example-run-all-diagnostics">Example: Run all diagnostics<a class="ancho
 <span><span class="va">base_model_name</span> <span class="op">&lt;-</span> <span class="st">"base model"</span></span></code></pre>
 <p>Another way to do handle directory management is by using a project
 file and the <code>here</code> package:</p>
-<pre><code><span><span class="va">directory</span> <span class="op">&lt;-</span> <span class="fu">here</span><span class="fu">::</span><span class="fu"><a href="https://here.r-lib.org//reference/here.html" class="external-link">here</a></span><span class="op">(</span><span class="st">"models"</span><span class="op">)</span></span>
+<pre><code><span><span class="va">directory</span> <span class="op">&lt;-</span> <span class="fu">here</span><span class="fu">::</span><span class="fu">here</span><span class="op">(</span><span class="st">"models"</span><span class="op">)</span></span>
 <span><span class="va">base_model_name</span> <span class="op">&lt;-</span> <span class="st">"base model"</span></span></code></pre>
 <p>The <code><a href="../reference/get_settings_profile.html">get_settings_profile()</a></code> specifies which parameters to
 run a profile for and the parameter ranges for each profile. The low and
@@ -202,7 +202,7 @@ <h3 id="example-run-all-diagnostics">Example: Run all diagnostics<a class="ancho
 <h3 id="example-run-a-single-profile">Example: Run a single profile<a class="anchor" aria-label="anchor" href="#example-run-a-single-profile"></a>
 </h3>
 <pre><code><span><span class="kw"><a href="https://rdrr.io/r/base/library.html" class="external-link">library</a></span><span class="op">(</span><span class="va"><a href="https://github.com/pfmc-assessments/nwfscDiag" class="external-link">nwfscDiag</a></span><span class="op">)</span></span>
-<span><span class="va">directory</span> <span class="op">&lt;-</span> <span class="fu">here</span><span class="fu">::</span><span class="fu"><a href="https://here.r-lib.org//reference/here.html" class="external-link">here</a></span><span class="op">(</span><span class="st">"models"</span><span class="op">)</span></span>
+<span><span class="va">directory</span> <span class="op">&lt;-</span> <span class="fu">here</span><span class="fu">::</span><span class="fu">here</span><span class="op">(</span><span class="st">"models"</span><span class="op">)</span></span>
 <span><span class="va">base_model_name</span> <span class="op">&lt;-</span> <span class="st">"base model"</span></span>
 <span></span>
 <span><span class="va">profile_settings</span> <span class="op">&lt;-</span> <span class="fu"><a href="../reference/get_settings_profile.html">get_settings_profile</a></span><span class="op">(</span> </span>
@@ -226,7 +226,7 @@ <h3 id="example-run-a-single-profile">Example: Run a single profile<a class="anc
 <h3 id="example-run-jitters">Example: Run jitters<a class="anchor" aria-label="anchor" href="#example-run-jitters"></a>
 </h3>
 <pre><code><span><span class="kw"><a href="https://rdrr.io/r/base/library.html" class="external-link">library</a></span><span class="op">(</span><span class="va"><a href="https://github.com/pfmc-assessments/nwfscDiag" class="external-link">nwfscDiag</a></span><span class="op">)</span></span>
-<span><span class="va">directory</span> <span class="op">&lt;-</span> <span class="fu">here</span><span class="fu">::</span><span class="fu"><a href="https://here.r-lib.org//reference/here.html" class="external-link">here</a></span><span class="op">(</span><span class="st">"models"</span><span class="op">)</span></span>
+<span><span class="va">directory</span> <span class="op">&lt;-</span> <span class="fu">here</span><span class="fu">::</span><span class="fu">here</span><span class="op">(</span><span class="st">"models"</span><span class="op">)</span></span>
 <span><span class="va">base_model_name</span> <span class="op">&lt;-</span> <span class="st">"base model"</span></span>
 <span></span>
 <span><span class="va">model_settings</span> <span class="op">&lt;-</span> <span class="fu"><a href="../reference/get_settings.html">get_settings</a></span><span class="op">(</span></span>
@@ -243,7 +243,7 @@ <h3 id="example-run-jitters">Example: Run jitters<a class="anchor" aria-label="a
 <h3 id="example-run-retrospectives">Example: Run retrospectives<a class="anchor" aria-label="anchor" href="#example-run-retrospectives"></a>
 </h3>
 <pre><code><span><span class="kw"><a href="https://rdrr.io/r/base/library.html" class="external-link">library</a></span><span class="op">(</span><span class="va"><a href="https://github.com/pfmc-assessments/nwfscDiag" class="external-link">nwfscDiag</a></span><span class="op">)</span></span>
-<span><span class="va">directory</span> <span class="op">&lt;-</span> <span class="fu">here</span><span class="fu">::</span><span class="fu"><a href="https://here.r-lib.org//reference/here.html" class="external-link">here</a></span><span class="op">(</span><span class="st">"models"</span><span class="op">)</span></span>
+<span><span class="va">directory</span> <span class="op">&lt;-</span> <span class="fu">here</span><span class="fu">::</span><span class="fu">here</span><span class="op">(</span><span class="st">"models"</span><span class="op">)</span></span>
 <span><span class="va">base_model_name</span> <span class="op">&lt;-</span> <span class="st">"base model"</span></span>
 <span></span>
 <span><span class="va">model_settings</span> <span class="op">&lt;-</span> <span class="fu"><a href="../reference/get_settings.html">get_settings</a></span><span class="op">(</span></span>
@@ -263,7 +263,7 @@ <h3 id="example-rerun-select-values-for-a-profile">Example: Rerun select values
 that failed to converge in the profile. The
 <code><a href="../reference/rerun_profile_vals.html">rerun_profile_vals()</a></code> function allows users to do this.</p>
 <pre><code><span><span class="kw"><a href="https://rdrr.io/r/base/library.html" class="external-link">library</a></span><span class="op">(</span><span class="va"><a href="https://github.com/pfmc-assessments/nwfscDiag" class="external-link">nwfscDiag</a></span><span class="op">)</span></span>
-<span><span class="va">directory</span> <span class="op">&lt;-</span> <span class="fu">here</span><span class="fu">::</span><span class="fu"><a href="https://here.r-lib.org//reference/here.html" class="external-link">here</a></span><span class="op">(</span><span class="st">"models"</span><span class="op">)</span></span>
+<span><span class="va">directory</span> <span class="op">&lt;-</span> <span class="fu">here</span><span class="fu">::</span><span class="fu">here</span><span class="op">(</span><span class="st">"models"</span><span class="op">)</span></span>
 <span><span class="va">base_model_name</span> <span class="op">&lt;-</span> <span class="st">"base model"</span></span>
 <span><span class="fu"><a href="../reference/rerun_profile_vals.html">rerun_profile_vals</a></span><span class="op">(</span></span>
 <span>  mydir <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/file.path.html" class="external-link">file.path</a></span><span class="op">(</span><span class="va">model_dir</span>, <span class="va">base_name</span><span class="op">)</span>,</span>
diff --git a/pkgdown.yml b/pkgdown.yml
index 3edfe1a..495d105 100644
--- a/pkgdown.yml
+++ b/pkgdown.yml
@@ -3,4 +3,4 @@ pkgdown: 2.1.1
 pkgdown_sha: ~
 articles:
   nwfscDiag: nwfscDiag.html
-last_built: 2024-10-17T16:04Z
+last_built: 2024-11-13T15:20Z