From b9868719da56914372ce93d2d3c1c649a40d9887 Mon Sep 17 00:00:00 2001 From: Chantel Wetzel Date: Wed, 28 Jun 2023 14:26:29 -0700 Subject: [PATCH] update deprecated input text --- man/get_settings_profile.Rd | 8 +++----- 1 file changed, 3 insertions(+), 5 deletions(-) diff --git a/man/get_settings_profile.Rd b/man/get_settings_profile.Rd index 0f95438..8808007 100644 --- a/man/get_settings_profile.Rd +++ b/man/get_settings_profile.Rd @@ -26,11 +26,9 @@ get_settings_profile( real indicates bounds in the parameter space, relative indicates how far to go from the base parameter, and multiplier indicates that low and high bounds are set at x\\% above and below the base parameter.} -\item{use_prior_like}{Deprecated Option to include or exclude the prior likelihoods in the likelihood -profiles. A value of 0 corresponds to the Stock Sythesis were this would exclude -and a value of 1 would include the prior likelihood contribution. Parameters with priors used for estimation -(e.g., natural mortality, steepness) are often profiled across and including or excluding the prior likelihood -contribution may be wanted in specific instances. The default setting excludes the prior likelihood contributions.} +\item{use_prior_like}{Deprecated: The use_prior_like input is no longer needed since r4ss now +automatically plots the likelihood profile with and without any parameter prior likelihood contributions +regardless of the setting in the user starter file.} } \value{ A matrix of low, high, and step size values for the default parameters