diff --git a/index.yml b/index.yml index ee5a804..e0af160 100644 --- a/index.yml +++ b/index.yml @@ -1,7 +1,7 @@ -schema_version: 2-0-0 -metadata: The PHA4GE list of amplicon primer schemes +schema_version: 0.9.0 +metadata: The PHA4GE list of tiling amplicon primer schemes repository: https://github.com/pha4ge/primer-schemes -latest_doi: https://doi.coming.soon/ +latest_doi: '' license: CC-BY-4.0 organisms: - organism: sars-cov-2 diff --git a/mpxv/yale/v3/info.yml b/mpxv/yale/v3/info.yml index 721874d..b36e012 100644 --- a/mpxv/yale/v3/info.yml +++ b/mpxv/yale/v3/info.yml @@ -1,4 +1,4 @@ -schema_version: 2-0-0 +schema_version: 0.9.0 name: yale-v3 organism: mpxv developers: @@ -11,5 +11,5 @@ amplicon_size: 2000 repository_url: https://github.com/pha4ge/primer-schemes/tree/main/mpxv/yale/v3 citations: - https://www.protocols.io/view/monkeypox-virus-multiplexed-pcr-amplicon-sequencin-5qpvob1nbl4o/v3 -primer_checksum: primaschema:973600b2f6aa2fee87b99c4311b47afcec83e9da79270598edf41b2b8124ddcf -reference_checksum: primaschema:3b3fa241d3d7968083d167ebfcdcae1ef9d1f8558b592bfec3201f6fe71b8f00 +primer_checksum: primaschema:973600b2f6aa2fee +reference_checksum: primaschema:3b3fa241d3d79680 diff --git a/niv/nipah/v1/info.yml b/niv/nipah/v1/info.yml index 30597a4..3c1b216 100644 --- a/niv/nipah/v1/info.yml +++ b/niv/nipah/v1/info.yml @@ -1,4 +1,4 @@ -schema_version: 2-0-0 +schema_version: 0.9.0 name: nipah-v1 organism: niv developers: @@ -6,5 +6,5 @@ developers: home_page: https://artic.network amplicon_size: 400 repository_url: https://github.com/pha4ge/primer-schemes/tree/main/niv/nipah/v1 -primer_checksum: primaschema:a56163858bad23072db0c4dac96c37294e7430b093397afba9ebd52a443c6aec -reference_checksum: primaschema:97e2ee3d469ba0b48c2fd7f8ee916356e5a07412ba35d173da00e828b8d5b51b +primer_checksum: primaschema:a56163858bad2307 +reference_checksum: primaschema:97e2ee3d469ba0b4 diff --git a/sars-cov-2/artic/v1/info.yml b/sars-cov-2/artic/v1/info.yml index 109c8d8..dd56245 100644 --- a/sars-cov-2/artic/v1/info.yml +++ b/sars-cov-2/artic/v1/info.yml @@ -1,4 +1,4 @@ -schema_version: 2-0-0 +schema_version: 0.9.0 name: artic-v1 organism: sars-cov-2 aliases: @@ -11,5 +11,5 @@ repository_url: https://github.com/pha4ge/primer-schemes/tree/main/sars-cov-2/ar citations: - https://doi.org/10.1101%2F2020.09.04.283077 primer_scheme_status: DEPRECATED -primer_checksum: primaschema:e1560cb6d7bf5c0411d80f56e5d6b3fa4f5e4006b1bfaa745b18059c249d0403 -reference_checksum: primaschema:7d5621cd3b3e498d0c27fcca9d3d3c5168c7f3d3f9776f3005c7011bd90068ca +primer_checksum: primaschema:e1560cb6d7bf5c04 +reference_checksum: primaschema:7d5621cd3b3e498d diff --git a/sars-cov-2/artic/v2/info.yml b/sars-cov-2/artic/v2/info.yml index 6cd8da1..26c8f9a 100644 --- a/sars-cov-2/artic/v2/info.yml +++ b/sars-cov-2/artic/v2/info.yml @@ -1,4 +1,4 @@ -schema_version: 2-0-0 +schema_version: 0.9.0 name: artic-v2 organism: sars-cov-2 aliases: @@ -12,5 +12,5 @@ citations: - https://doi.org/10.1101%2F2020.09.04.283077 derived_from: artic-v1 primer_scheme_status: DEPRECATED -primer_checksum: primaschema:6b9e64d0968d826c637caa9df019d3bf157911592cf5f7506e6e8e7c5f191767 -reference_checksum: primaschema:7d5621cd3b3e498d0c27fcca9d3d3c5168c7f3d3f9776f3005c7011bd90068ca +primer_checksum: primaschema:6b9e64d0968d826c +reference_checksum: primaschema:7d5621cd3b3e498d diff --git a/sars-cov-2/artic/v3/info.yml b/sars-cov-2/artic/v3/info.yml index c9217a7..791231c 100644 --- a/sars-cov-2/artic/v3/info.yml +++ b/sars-cov-2/artic/v3/info.yml @@ -1,4 +1,4 @@ -schema_version: 2-0-0 +schema_version: 0.9.0 name: artic-v3 organism: sars-cov-2 aliases: @@ -12,5 +12,5 @@ citations: - https://doi.org/10.1101%2F2020.09.04.283077 derived_from: artic-v2 primer_scheme_status: DEPRECATED -primer_checksum: primaschema:34ca07d9c616461fd7a1fae563188315a1fbfe7052bfbc4ee5d9ac8144ad8c56 -reference_checksum: primaschema:7d5621cd3b3e498d0c27fcca9d3d3c5168c7f3d3f9776f3005c7011bd90068ca +primer_checksum: primaschema:34ca07d9c616461f +reference_checksum: primaschema:7d5621cd3b3e498d diff --git a/sars-cov-2/artic/v4.1/info.yml b/sars-cov-2/artic/v4.1/info.yml index 4a3d1e2..e11bcdb 100644 --- a/sars-cov-2/artic/v4.1/info.yml +++ b/sars-cov-2/artic/v4.1/info.yml @@ -1,4 +1,4 @@ -schema_version: 2-0-0 +schema_version: 0.9.0 name: artic-v4.1 organism: sars-cov-2 aliases: @@ -16,5 +16,5 @@ repository_url: https://github.com/pha4ge/primer-schemes/tree/main/sars-cov-2/ar citations: - https://doi.org/10.1101%2F2020.09.04.283077 derived_from: artic-v4 -primer_checksum: primaschema:9005b441227985c882434ffce1e72682ea17591005f5e15c72a6fce774d630cb -reference_checksum: primaschema:7d5621cd3b3e498d0c27fcca9d3d3c5168c7f3d3f9776f3005c7011bd90068ca +primer_checksum: primaschema:9005b441227985c8 +reference_checksum: primaschema:7d5621cd3b3e498d diff --git a/sars-cov-2/artic/v4/info.yml b/sars-cov-2/artic/v4/info.yml index 0f0a819..40fff48 100644 --- a/sars-cov-2/artic/v4/info.yml +++ b/sars-cov-2/artic/v4/info.yml @@ -1,4 +1,4 @@ -schema_version: 2-0-0 +schema_version: 0.9.0 name: artic-v4 organism: sars-cov-2 aliases: @@ -12,5 +12,5 @@ citations: - https://doi.org/10.1101%2F2020.09.04.283077 derived_from: artic-v3 primer_scheme_status: DEPRECATED -primer_checksum: primaschema:2df872deb2123004c098c5c96610a14e5cdc7b8b27593e9a3ad2d37d9282543b -reference_checksum: primaschema:7d5621cd3b3e498d0c27fcca9d3d3c5168c7f3d3f9776f3005c7011bd90068ca +primer_checksum: primaschema:2df872deb2123004 +reference_checksum: primaschema:7d5621cd3b3e498d diff --git a/sars-cov-2/artic/v5.0.0_400/info.yml b/sars-cov-2/artic/v5.0.0_400/info.yml index e5db00b..2ffca70 100644 --- a/sars-cov-2/artic/v5.0.0_400/info.yml +++ b/sars-cov-2/artic/v5.0.0_400/info.yml @@ -1,4 +1,4 @@ -schema_version: 2-0-0 +schema_version: 0.9.0 name: artic-v5.0.0_400 organism: sars-cov-2 developers: @@ -9,5 +9,5 @@ repository_url: https://github.com/pha4ge/primer-schemes/tree/main/sars-cov-2/ar citations: - https://doi.org/10.1101%2F2020.09.04.283077 derived_from: artic-v4.1 -primer_checksum: primaschema:869769fe308973a7c21fb3220d5cfc60fdd64999ae9762a2650100157fa754a7 -reference_checksum: primaschema:7d5621cd3b3e498d0c27fcca9d3d3c5168c7f3d3f9776f3005c7011bd90068ca +primer_checksum: primaschema:869769fe308973a7 +reference_checksum: primaschema:7d5621cd3b3e498d diff --git a/sars-cov-2/artic/v5.1.0_400/info.yml b/sars-cov-2/artic/v5.1.0_400/info.yml index dba6657..5a9101e 100644 --- a/sars-cov-2/artic/v5.1.0_400/info.yml +++ b/sars-cov-2/artic/v5.1.0_400/info.yml @@ -1,4 +1,4 @@ -schema_version: 2-0-0 +schema_version: 0.9.0 name: artic-v5.1.0_400 organism: sars-cov-2 developers: @@ -10,5 +10,5 @@ citations: - https://doi.org/10.1101%2F2020.09.04.283077 derived_from: artic-v5.0.0_400 primer_scheme_status: DEPRECATED -primer_checksum: primaschema:f5314a544798382906d34700e8ec7fb0b5cfc8dc9ac496bf076f3f3ca1876a6d -reference_checksum: primaschema:7d5621cd3b3e498d0c27fcca9d3d3c5168c7f3d3f9776f3005c7011bd90068ca +primer_checksum: primaschema:f5314a5447983829 +reference_checksum: primaschema:7d5621cd3b3e498d diff --git a/sars-cov-2/artic/v5.2.0_1200/info.yml b/sars-cov-2/artic/v5.2.0_1200/info.yml index 7e357df..58eb905 100644 --- a/sars-cov-2/artic/v5.2.0_1200/info.yml +++ b/sars-cov-2/artic/v5.2.0_1200/info.yml @@ -1,4 +1,4 @@ -schema_version: 2-0-0 +schema_version: 0.9.0 name: artic-v5.2.0_1200 organism: sars-cov-2 developers: @@ -9,5 +9,5 @@ repository_url: https://github.com/pha4ge/primer-schemes/tree/main/sars-cov-2/ar citations: - https://doi.org/10.1101%2F2020.09.04.283077 primer_scheme_status: DEPRECATED -primer_checksum: primaschema:b33c1d942605ce25da394b0bd61eb21905bc664b7f6788378431a635d0e99e91 -reference_checksum: primaschema:7d5621cd3b3e498d0c27fcca9d3d3c5168c7f3d3f9776f3005c7011bd90068ca +primer_checksum: primaschema:b33c1d942605ce25 +reference_checksum: primaschema:7d5621cd3b3e498d diff --git a/sars-cov-2/artic/v5.2.0_400/info.yml b/sars-cov-2/artic/v5.2.0_400/info.yml index 6b1c4b7..04bed5c 100644 --- a/sars-cov-2/artic/v5.2.0_400/info.yml +++ b/sars-cov-2/artic/v5.2.0_400/info.yml @@ -1,4 +1,4 @@ -schema_version: 2-0-0 +schema_version: 0.9.0 name: artic-v5.2.0_400 organism: sars-cov-2 developers: @@ -9,5 +9,5 @@ repository_url: https://github.com/pha4ge/primer-schemes/tree/main/sars-cov-2/ar citations: - https://doi.org/10.1101%2F2020.09.04.283077 derived_from: artic-v5.1.0_400 -primer_checksum: primaschema:f2e406ea13f767aa2205f257fca55ad9f0dd3951027028a9cc113ad4ad959e7b -reference_checksum: primaschema:7d5621cd3b3e498d0c27fcca9d3d3c5168c7f3d3f9776f3005c7011bd90068ca +primer_checksum: primaschema:f2e406ea13f767aa +reference_checksum: primaschema:7d5621cd3b3e498d diff --git a/sars-cov-2/artic/v5.3.2_400/info.yml b/sars-cov-2/artic/v5.3.2_400/info.yml index 489b456..1b18e82 100644 --- a/sars-cov-2/artic/v5.3.2_400/info.yml +++ b/sars-cov-2/artic/v5.3.2_400/info.yml @@ -1,4 +1,4 @@ -schema_version: 2-0-0 +schema_version: 0.9.0 name: artic-v5.3.2_400 organism: sars-cov-2 developers: @@ -13,6 +13,6 @@ citations: - https://doi.org/10.1101%2F2020.09.04.283077 derived_from: artic-v5.2.0_400 notes: - - https://community.artic.network/t/sars-cov-2-version-5-3-2-scheme-release/462 -primer_checksum: primaschema:223ca9c2d1c7944e284de625977def81c7b2b84595402cc7ad85d858e772d193 -reference_checksum: primaschema:7d5621cd3b3e498d0c27fcca9d3d3c5168c7f3d3f9776f3005c7011bd90068ca +- https://community.artic.network/t/sars-cov-2-version-5-3-2-scheme-release/462 +primer_checksum: primaschema:223ca9c2d1c7944e +reference_checksum: primaschema:7d5621cd3b3e498d diff --git a/sars-cov-2/eden/v1/info.yml b/sars-cov-2/eden/v1/info.yml index 10c0616..f5e0626 100644 --- a/sars-cov-2/eden/v1/info.yml +++ b/sars-cov-2/eden/v1/info.yml @@ -1,4 +1,4 @@ -schema_version: 2-0-0 +schema_version: 0.9.0 name: eden-v1 organism: sars-cov-2 aliases: @@ -15,5 +15,5 @@ citations: - https://www.protocols.io/view/sars-cov-2-genome-sequencing-using-long-pooled-amp-kxygxeob4v8j/v1 notes: - Protocol includes addendum for ONT sequencing -primer_checksum: primaschema:9f9c80501b744d15c9f8f077f0d7b0a63fbf6f07903007fb4bd264c500138e49 -reference_checksum: primaschema:7d5621cd3b3e498d0c27fcca9d3d3c5168c7f3d3f9776f3005c7011bd90068ca +primer_checksum: primaschema:9f9c80501b744d15 +reference_checksum: primaschema:7d5621cd3b3e498d diff --git a/sars-cov-2/midnight/bccdc-v1/info.yml b/sars-cov-2/midnight/bccdc-v1/info.yml index 719018d..9de2b2a 100644 --- a/sars-cov-2/midnight/bccdc-v1/info.yml +++ b/sars-cov-2/midnight/bccdc-v1/info.yml @@ -1,4 +1,4 @@ -schema_version: 2-0-0 +schema_version: 0.9.0 name: midnight-bccdc-v1 organism: sars-cov-2 derived_from: midnight-v1 @@ -14,5 +14,5 @@ citations: notes: - Accomodates P.1 primer_scheme_status: DEPRECATED -primer_checksum: primaschema:62f2d91308027480dd030e937dce767f2d5cda5a47297895b878e8b6facaac06 -reference_checksum: primaschema:7d5621cd3b3e498d0c27fcca9d3d3c5168c7f3d3f9776f3005c7011bd90068ca +primer_checksum: primaschema:62f2d91308027480 +reference_checksum: primaschema:7d5621cd3b3e498d diff --git a/sars-cov-2/midnight/bccdc-v2/info.yml b/sars-cov-2/midnight/bccdc-v2/info.yml index eb938a8..f8e5ba2 100644 --- a/sars-cov-2/midnight/bccdc-v2/info.yml +++ b/sars-cov-2/midnight/bccdc-v2/info.yml @@ -1,4 +1,4 @@ -schema_version: 2-0-0 +schema_version: 0.9.0 name: midnight-bccdc-v2 organism: sars-cov-2 derived_from: midnight-bccdc-v1 @@ -14,5 +14,5 @@ citations: notes: - Accomodates BA.1 primer_scheme_status: DEPRECATED -primer_checksum: primaschema:50191ae0f7a45cf5f5e69253f76984cfffb81cf97751c8c696900f6a7d0cad18 -reference_checksum: primaschema:7d5621cd3b3e498d0c27fcca9d3d3c5168c7f3d3f9776f3005c7011bd90068ca +primer_checksum: primaschema:50191ae0f7a45cf5 +reference_checksum: primaschema:7d5621cd3b3e498d diff --git a/sars-cov-2/midnight/bccdc-v3/info.yml b/sars-cov-2/midnight/bccdc-v3/info.yml index d243c8b..14f448a 100644 --- a/sars-cov-2/midnight/bccdc-v3/info.yml +++ b/sars-cov-2/midnight/bccdc-v3/info.yml @@ -1,4 +1,4 @@ -schema_version: 2-0-0 +schema_version: 0.9.0 name: midnight-bccdc-v3 organism: sars-cov-2 derived_from: midnight-bccdc-v2 @@ -12,5 +12,5 @@ repository_url: https://github.com/pha4ge/primer-schemes/tree/main/sars-cov-2/mi citations: - https://dx.doi.org/10.17504/protocols.io.bwyppfvn primer_scheme_status: DEPRECATED -primer_checksum: primaschema:3e118ebd83d1a8613490e23c452ccc85422dd95a2726b5f39e8b1b1c46261505 -reference_checksum: primaschema:7d5621cd3b3e498d0c27fcca9d3d3c5168c7f3d3f9776f3005c7011bd90068ca +primer_checksum: primaschema:3e118ebd83d1a861 +reference_checksum: primaschema:7d5621cd3b3e498d diff --git a/sars-cov-2/midnight/bccdc-v4/info.yml b/sars-cov-2/midnight/bccdc-v4/info.yml index 9e7eacd..20032cf 100644 --- a/sars-cov-2/midnight/bccdc-v4/info.yml +++ b/sars-cov-2/midnight/bccdc-v4/info.yml @@ -1,4 +1,4 @@ -schema_version: 2-0-0 +schema_version: 0.9.0 name: midnight-bccdc-v4 aliases: - midnight-idt-v2 @@ -16,9 +16,9 @@ amplicon_size: 1200 repository_url: https://github.com/pha4ge/primer-schemes/tree/main/sars-cov-2/midnight/bccdc-v4 citations: - https://dx.doi.org/10.17504/protocols.io.bwyppfvn -primer_checksum: primaschema:6ed89a7ed159466dfc8244c372467e7319b1287e87438affc236cb2aa20adeb1 -reference_checksum: primaschema:7d5621cd3b3e498d0c27fcca9d3d3c5168c7f3d3f9776f3005c7011bd90068ca +primer_checksum: primaschema:6ed89a7ed159466d +reference_checksum: primaschema:7d5621cd3b3e498d notes: - Accomodates Omicron BA.2 -- IDT calls this the "-Midnight-1200 Amplicon Panel" and "Midnight Amplicon - Panel v2" +- IDT calls this the "-Midnight-1200 Amplicon Panel" and "Midnight Amplicon Panel + v2" diff --git a/sars-cov-2/midnight/ont-v3/info.yml b/sars-cov-2/midnight/ont-v3/info.yml index 6de801a..e5e1fca 100644 --- a/sars-cov-2/midnight/ont-v3/info.yml +++ b/sars-cov-2/midnight/ont-v3/info.yml @@ -1,4 +1,4 @@ -schema_version: 2-0-0 +schema_version: 0.9.0 name: midnight-ont-v3 organism: sars-cov-2 derived_from: midnight-v2 @@ -15,5 +15,5 @@ citations: - https://dx.doi.org/10.17504/protocols.io.bwyppfvn notes: - Accomodates Omicron BA.2 -primer_checksum: primaschema:2dab57b711f6e6b011648ec980fc987427fa48a6a2d227e39ac45316e3275813 -reference_checksum: primaschema:7d5621cd3b3e498d0c27fcca9d3d3c5168c7f3d3f9776f3005c7011bd90068ca +primer_checksum: primaschema:2dab57b711f6e6b0 +reference_checksum: primaschema:7d5621cd3b3e498d diff --git a/sars-cov-2/midnight/v1/info.yml b/sars-cov-2/midnight/v1/info.yml index aadefd7..79c1704 100644 --- a/sars-cov-2/midnight/v1/info.yml +++ b/sars-cov-2/midnight/v1/info.yml @@ -1,4 +1,4 @@ -schema_version: 2-0-0 +schema_version: 0.9.0 name: midnight-v1 organism: sars-cov-2 aliases: @@ -16,5 +16,5 @@ repository_url: https://github.com/pha4ge/primer-schemes/tree/main/sars-cov-2/mi citations: - https://dx.doi.org/10.17504/protocols.io.bwyppfvn primer_scheme_status: DEPRECATED -primer_checksum: primaschema:e1303ce0367cc245e66b80c10f8086c60f64b501e43dff0c0a248e64c34389b7 -reference_checksum: primaschema:7d5621cd3b3e498d0c27fcca9d3d3c5168c7f3d3f9776f3005c7011bd90068ca +primer_checksum: primaschema:e1303ce0367cc245 +reference_checksum: primaschema:7d5621cd3b3e498d diff --git a/sars-cov-2/midnight/v2/info.yml b/sars-cov-2/midnight/v2/info.yml index b004e00..47c95f2 100644 --- a/sars-cov-2/midnight/v2/info.yml +++ b/sars-cov-2/midnight/v2/info.yml @@ -1,4 +1,4 @@ -schema_version: 2-0-0 +schema_version: 0.9.0 name: midnight-v2 organism: sars-cov-2 aliases: @@ -20,5 +20,5 @@ notes: - https://twitter.com/freed_nikki/status/1464477522448433156 - Not considered a new version by Freed et al. and IDT despite additional primer primer_scheme_status: DEPRECATED -primer_checksum: primaschema:8f733a1f180c435af14d88fa395df5f88e1e1e0e9bde2c0719af8111079afce5 -reference_checksum: primaschema:7d5621cd3b3e498d0c27fcca9d3d3c5168c7f3d3f9776f3005c7011bd90068ca +primer_checksum: primaschema:8f733a1f180c435a +reference_checksum: primaschema:7d5621cd3b3e498d diff --git a/sars-cov-2/varskip/vsl1a/info.yml b/sars-cov-2/varskip/vsl1a/info.yml index 26bf79e..b060259 100644 --- a/sars-cov-2/varskip/vsl1a/info.yml +++ b/sars-cov-2/varskip/vsl1a/info.yml @@ -1,4 +1,4 @@ -schema_version: 2-0-0 +schema_version: 0.9.0 name: varskip-vsl1a display_name: VarSkip VSL1A organism: sars-cov-2 @@ -13,6 +13,7 @@ repository_url: https://github.com/pha4ge/primer-schemes/tree/main/sars-cov-2/va citations: - https://doi.org/10.1101%2F2020.09.04.283077 notes: -- Adapted from bed + tsv at https://github.com/nebiolabs/VarSkip with help from Brad Langhorst -primer_checksum: primaschema:f0d4caf86103e5104d2d29d15ffa66d71a29a923dc094bb94dac3c80aef45059 -reference_checksum: primaschema:7d5621cd3b3e498d0c27fcca9d3d3c5168c7f3d3f9776f3005c7011bd90068ca +- Adapted from bed + tsv at https://github.com/nebiolabs/VarSkip with help from Brad + Langhorst +primer_checksum: primaschema:f0d4caf86103e510 +reference_checksum: primaschema:7d5621cd3b3e498d diff --git a/sars-cov-2/varskip/vss1a/info.yml b/sars-cov-2/varskip/vss1a/info.yml index a0e088a..1d9ae84 100644 --- a/sars-cov-2/varskip/vss1a/info.yml +++ b/sars-cov-2/varskip/vss1a/info.yml @@ -1,4 +1,4 @@ -schema_version: 2-0-0 +schema_version: 0.9.0 name: varskip-vss1a display_name: VarSkip VSS1A organism: sars-cov-2 @@ -15,7 +15,8 @@ repository_url: https://github.com/pha4ge/primer-schemes/tree/main/sars-cov-2/va citations: - https://doi.org/10.1101%2F2020.09.04.283077 notes: -- Adapted from bed + tsv at https://github.com/nebiolabs/VarSkip with help from Brad Langhorst +- Adapted from bed + tsv at https://github.com/nebiolabs/VarSkip with help from Brad + Langhorst primer_scheme_status: DEPRECATED -primer_checksum: primaschema:f0d4caf86103e5104d2d29d15ffa66d71a29a923dc094bb94dac3c80aef45059 -reference_checksum: primaschema:7d5621cd3b3e498d0c27fcca9d3d3c5168c7f3d3f9776f3005c7011bd90068ca +primer_checksum: primaschema:f0d4caf86103e510 +reference_checksum: primaschema:7d5621cd3b3e498d diff --git a/sars-cov-2/varskip/vss2a/info.yml b/sars-cov-2/varskip/vss2a/info.yml index 50f0217..6072406 100644 --- a/sars-cov-2/varskip/vss2a/info.yml +++ b/sars-cov-2/varskip/vss2a/info.yml @@ -1,4 +1,4 @@ -schema_version: 2-0-0 +schema_version: 0.9.0 name: varskip-vss2a display_name: VarSkip VSS2A organism: sars-cov-2 @@ -15,7 +15,8 @@ repository_url: https://github.com/pha4ge/primer-schemes/tree/main/sars-cov-2/va citations: - https://doi.org/10.1101%2F2020.09.04.283077 notes: -- Adapted from bed + tsv at https://github.com/nebiolabs/VarSkip with help from Brad Langhorst +- Adapted from bed + tsv at https://github.com/nebiolabs/VarSkip with help from Brad + Langhorst derived_from: varskip-vss1a -primer_checksum: primaschema:2666515f9715280a43fdad7ffc5eeb0ffb2948f5f4ce07ccd71d572453f22daa -reference_checksum: primaschema:7d5621cd3b3e498d0c27fcca9d3d3c5168c7f3d3f9776f3005c7011bd90068ca +primer_checksum: primaschema:2666515f9715280a +reference_checksum: primaschema:7d5621cd3b3e498d diff --git a/sars-cov-2/varskip/vss2b/info.yml b/sars-cov-2/varskip/vss2b/info.yml index dd86c65..62b2658 100644 --- a/sars-cov-2/varskip/vss2b/info.yml +++ b/sars-cov-2/varskip/vss2b/info.yml @@ -1,4 +1,4 @@ -schema_version: 2-0-0 +schema_version: 0.9.0 name: varskip-vss2b display_name: VarSkip VSS2B organism: sars-cov-2 @@ -15,7 +15,8 @@ repository_url: https://github.com/pha4ge/primer-schemes/tree/main/sars-cov-2/va citations: - https://doi.org/10.1101%2F2020.09.04.283077 notes: -- Adapted from bed + tsv at https://github.com/nebiolabs/VarSkip with help from Brad Langhorst +- Adapted from bed + tsv at https://github.com/nebiolabs/VarSkip with help from Brad + Langhorst derived_from: varskip-vss2a -primer_checksum: primaschema:e4242c52aff32c590f8b1354bfacf359e3b7f6278263159116602149d8612539 -reference_checksum: primaschema:7d5621cd3b3e498d0c27fcca9d3d3c5168c7f3d3f9776f3005c7011bd90068ca +primer_checksum: primaschema:e4242c52aff32c59 +reference_checksum: primaschema:7d5621cd3b3e498d