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Fix picrust2-env.yaml dependencies (#378)
1. ete3 has to be installed from etetoolkit channel. conda-forge does not work, even though it is listed on https://anaconda.org/conda-forge/ete3. 2. Installing sepp 4.5.5 requires python3.10. 3. Runnning test requires typeguard 4.4.2 to be specified separately.
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picrust2-env.yaml

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@@ -2,12 +2,15 @@ name: picrust2
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channels:
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- conda-forge
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- etetoolkit
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- r
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- bioconda
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- anaconda
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- defaults
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dependencies:
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- python >=3.10
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- r-base >=3.5.1
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- biom-format >=2.1.10
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- cython
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- epa-ng =0.3.8
@@ -23,8 +26,7 @@ dependencies:
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- pandas >=1.1.5
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- pytest >=4.4.1
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- pytest-cov >=2.6.1
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- python >=3.5
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- r-base >=3.5.1
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- typeguard =4.4.2
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- r-castor >=1.7.2
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- scipy >=1.2.1
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- sepp =4.5.5

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