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swap xicorr
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j-bac committed Mar 30, 2024
1 parent 94b9d7e commit 8686e9c
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion stream2/tools/_markers.py
Original file line number Diff line number Diff line change
Expand Up @@ -457,8 +457,8 @@ def detect_transition_markers(
# /!\ dont use df_cells_sort
# and pseudotime_cells_sort, breaks xicorr
res = xicorr_ps(
np.array(df_cells.iloc[:, ix_cutoff]),
np.array(pseudotime_cells),
np.array(df_cells.iloc[:, ix_cutoff])
)
df_stat_pval_qval["stat"] = res[0]
df_stat_pval_qval["pval"] = res[1]
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