From 8686e9ca555b6950de1904c993505621e212c145 Mon Sep 17 00:00:00 2001 From: j-bac Date: Sat, 30 Mar 2024 10:27:48 +0100 Subject: [PATCH] swap xicorr --- stream2/tools/_markers.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/stream2/tools/_markers.py b/stream2/tools/_markers.py index f3382ae..e434560 100644 --- a/stream2/tools/_markers.py +++ b/stream2/tools/_markers.py @@ -457,8 +457,8 @@ def detect_transition_markers( # /!\ dont use df_cells_sort # and pseudotime_cells_sort, breaks xicorr res = xicorr_ps( - np.array(df_cells.iloc[:, ix_cutoff]), np.array(pseudotime_cells), + np.array(df_cells.iloc[:, ix_cutoff]) ) df_stat_pval_qval["stat"] = res[0] df_stat_pval_qval["pval"] = res[1]