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j-bac committed Mar 23, 2024
1 parent 8499b37 commit 94b9d7e
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion stream2/tools/_markers.py
Original file line number Diff line number Diff line change
Expand Up @@ -366,7 +366,7 @@ def detect_transition_markers(
+ " cells ..."
)
input_markers_expressed = np.array(input_markers)[
np.where((df_sc[input_markers] != 0).sum(axis=0) > min_num_cells)[0]
np.where((df_sc[input_markers]>0).sum(axis=0) > min_num_cells)[0]
].tolist()
df_marker_detection = df_sc[input_markers_expressed].copy()

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