debug argument name

pinellolab · Mar 28, 2024 · e938d8c · e938d8c
1 parent 25c0a1b
commit e938d8c
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Showing 2 changed files with 5 additions and 5 deletions.
diff --git a/bean/model/run.py b/bean/model/run.py
@@ -326,9 +326,9 @@ def check_args(args, bdata):
         raise ValueError(
             f"Condition column set by `--condition-col` {args.condition_col} not in ReporterScreen.samples.columns:{bdata.samples.columns}. Check your input."
         )
-    if args.control_condition_label not in bdata.samples[args.condition_col].tolist():
+    if args.control_condition not in bdata.samples[args.condition_col].tolist():
         raise ValueError(
-            f"No sample has control label (set by `--control-condition-label`) {args.control_condition_label} in ReporterScreen.samples[{args.condition_col}]: {bdata.samples[args.condition_col]}. Check your input."
+            f"No sample has control label (set by `--control-condition`) {args.control_condition} in ReporterScreen.samples[{args.condition_col}]: {bdata.samples[args.condition_col]}. Check your input."
         )
     if args.replicate_col not in bdata.samples.columns:
         raise ValueError(

diff --git a/bean/plotting/editing_patterns.py b/bean/plotting/editing_patterns.py
@@ -129,9 +129,9 @@ def plot_by_pos_context(
         f"C{target_base}": 0,
         f"T{target_base}": 0.2,
     }
-    edit_rates_df[
-        "spacer_pos_ctxt"
-    ] = edit_rates_df.spacer_pos + edit_rates_df.context.map(context_to_offset_map)
+    edit_rates_df["spacer_pos_ctxt"] = (
+        edit_rates_df.spacer_pos + edit_rates_df.context.map(context_to_offset_map)
+    )
     fig, ax = plt.subplots(figsize=(6, 3))
     sns.scatterplot(
         edit_rates_df.loc[