unify.bib

%% This BibTeX bibliography file was created using BibDesk.
%% http://bibdesk.sourceforge.net/


%% Created for Jason Gallia at 2015-01-30 17:07:58 -0500 


%% Saved with string encoding Unicode (UTF-8) 


@string{algorithmica = {Algorithmica}}

@string{asic = {Proc. ASIC}}

@string{aspdac = {Proc. Asia South Pacific Design Automation Conf.}}

@string{cicc = {Proc. Custom Integrated Circuits Conf.}}

@string{computer = {IEEE Computer}}

@string{dac = {Proc. Design Automation Conf}}

@string{date = {Proc. Design, Automation and Test in Europe Conf.}}

@string{decision = {Decision Sciences}}

@string{edtc = {Proc. European Design and Test Conf.}}

@string{ejor = {European Journal of Operational Research}}

@string{eurodac = {Proc. European Design Automation Conf.}}

@string{fpga = {FPGA}}

@string{glsvlsi = {Proc. Great Lakes Symposium on VLSI}}

@string{iccad = {Proc. Int. Conf. on Computer Aided Design}}

@string{iccd = {Proc. IEEE Int. Conf. on Computer Design}}

@string{icsa = {Proc. Int'l Symp. on Computer Architecture}}

@string{icvlsi = {Int'l Conf. on VLSI Design}}

@string{ieeeted = {IEEE Trans. Electron Devices}}

@string{ieepcds = {IEEE Proc.-Circuits Devices Syst.}}

@string{iie = {IIE Transactions}}

@string{integration = {Integration, the VLSI Journal}}

@string{ipl = {Information Processing Letters}}

@string{iretec = {IRE Trans. on Electronic Computers}}

@string{iscas = {Proc. IEEE Int. Symp. on Circuits and Systems}}

@string{islped = {Proc. Int. Symp. on Low Power Electronic Design}}

@string{ispd = {Proc. Int. Symp. on Physical Design}}

@string{isscc = {Proc. IEEE Int. Solid-State Circuits Conference}}

@string{iwls = {Int'l Workshop on Logic Synthesis}}

@string{iwrsp = {Int. Workshop on Rapid System Prototyping}}

@string{japhysics = {Journal of Applied Physics}}

@string{joc = {INFORMS Journal of Computing}}

@string{jssc = {IEEE Journal of Solid State Circuits}}

@string{lped = {Proc. Int. Symp. on Low Power Electronics and Design}}

@string{mcmc = {Proc. IEEE Multi-Chip Module Conf.}}

@string{networks = {Networks}}

@string{optimize = {Optimization and Engineering}}

@string{or = {Operations Research}}

@string{sac = {SAC}}

@string{science = {Science}}

@string{slip = {Proc. System Level Interconnect Prediction Workshop}}

@string{stoc = {Proc. STOC}}

@string{tcad = {IEEE Trans. on Computer-Aided Design of Integrated Circuits and Systems}}

@string{tcomp = {IEEE Trans. on Computers}}

@string{tcs = {IEEE Trans. on Circuits and Systems}}

@string{todaes = {ACM Trans. on Design Automation of Electronics Systems}}

@string{tsmc = {IEEE Trans. on Systems, Man, and Cybernetics}}

@string{tvlsi = {IEEE Trans. on Very Large Scale Integration (VLSI) Systems}}

@string{uclacsd = {UCLA CS Dept}}


@inproceedings{kuhn510481,
	Address = {Berkeley, Calif.},
	Author = {Kuhn, H. W. and Tucker, A. W.},
	Booktitle = {Proceedings of the Second Berkeley Symposium on Mathematical Statistics and Probability},
	Date-Added = {2015-01-30 22:02:38 +0000},
	Date-Modified = {2015-01-30 22:07:07 +0000},
	Pages = {481--492},
	Publisher = {University of California Press},
	Title = {Nonlinear Programming},
	Year = {1951}}

@inproceedings{Papa040113,
	Author = {Papa, D.A. and Adya, S.N. and Markov, I.L.},
	Booktitle = {Proceedings of the 14th ACM Great Lakes symposium on VLSI},
	Date-Added = {2012-11-25 16:42:39 +0000},
	Date-Modified = {2012-11-25 16:43:41 +0000},
	Organization = {AMC},
	Pages = {113--118},
	Title = {Constructive benchmarking for placement},
	Year = {2004}}

@inproceedings{Donath800412,
	Acmid = {804563},
	Address = {New York, NY, USA},
	Author = {Donath, W. E.},
	Booktitle = {Proceedings of the 17th Design Automation Conference},
	Doi = {10.1145/800139.804563},
	Isbn = {0-89791-020-6},
	Location = {Minneapolis, Minnesota, United States},
	Numpages = {8},
	Pages = {412--419},
	Publisher = {ACM},
	Series = {DAC '80},
	Title = {Complexity theory and design automation},
	Url = {http://doi.acm.org/10.1145/800139.804563},
	Year = {1980},
	Bdsk-Url-1 = {http://doi.acm.org/10.1145/800139.804563},
	Bdsk-Url-2 = {http://dx.doi.org/10.1145/800139.804563}}

@inproceedings{Olukotun:1987:PIP:37888.38016,
	Acmid = {38016},
	Address = {New York, NY, USA},
	Author = {Olukotun, O. A. and Mudge, T. N.},
	Booktitle = {Proceedings of the 24th ACM/IEEE Design Automation Conference},
	Doi = {10.1145/37888.38016},
	Isbn = {0-8186-0781-5},
	Location = {Miami Beach, Florida, United States},
	Numpages = {7},
	Pages = {814--820},
	Publisher = {ACM},
	Series = {DAC '87},
	Title = {A preliminary investigation into parallel routing on a hypercube computer},
	Url = {http://doi.acm.org/10.1145/37888.38016},
	Year = {1987},
	Bdsk-Url-1 = {http://doi.acm.org/10.1145/37888.38016},
	Bdsk-Url-2 = {http://dx.doi.org/10.1145/37888.38016}}

@inproceedings{Naroska:1998:PVS:368058.368127,
	Acmid = {368127},
	Address = {Washington, DC, USA},
	Author = {Naroska, E.},
	Booktitle = {Proceedings of the conference on Design, automation and test in Europe},
	Isbn = {0-8186-8359-7},
	Keywords = {Conservative Parallel VHDL simulation, parallel discrete event simulation, PDES},
	Location = {Le Palais des Congr\&\#233;s de Paris, France},
	Numpages = {7},
	Pages = {159--165},
	Publisher = {IEEE Computer Society},
	Series = {DATE '98},
	Title = {Parallel VHDL simulation},
	Url = {http://dl.acm.org/citation.cfm?id=368058.368127},
	Year = {1998},
	Bdsk-Url-1 = {http://dl.acm.org/citation.cfm?id=368058.368127}}

@inproceedings{Yang:1991:PPC:123186.123318,
	Acmid = {123318},
	Address = {New York, NY, USA},
	Author = {Yang, Gung-Chung},
	Booktitle = {Proceedings of the 27th ACM/IEEE Design Automation Conference},
	Doi = {10.1145/123186.123318},
	Isbn = {0-89791-363-9},
	Location = {Orlando, Florida, United States},
	Numpages = {6},
	Pages = {400--405},
	Publisher = {ACM},
	Series = {DAC '90},
	Title = {PARASPICE: a parallel circuit simulator for shared-memory multiprocessors},
	Url = {http://doi.acm.org/10.1145/123186.123318},
	Year = {1990},
	Bdsk-Url-1 = {http://doi.acm.org/10.1145/123186.123318},
	Bdsk-Url-2 = {http://dx.doi.org/10.1145/123186.123318}}

@inproceedings{Brouwer:1991:PPH:123186.123429,
	Acmid = {123429},
	Address = {New York, NY, USA},
	Author = {Brouwer, Randall J. and Banerjee, Prithviraj},
	Booktitle = {Proceedings of the 27th ACM/IEEE Design Automation Conference},
	Doi = {10.1145/123186.123429},
	Isbn = {0-89791-363-9},
	Location = {Orlando, Florida, United States},
	Numpages = {4},
	Pages = {650--653},
	Publisher = {ACM},
	Series = {DAC '90},
	Title = {PHIGURE: a parallel hierarchical global router},
	Url = {http://doi.acm.org/10.1145/123186.123429},
	Year = {1990},
	Bdsk-Url-1 = {http://doi.acm.org/10.1145/123186.123429},
	Bdsk-Url-2 = {http://dx.doi.org/10.1145/123186.123429}}

@inproceedings{Jones:1987:PPA:37888.38015,
	Acmid = {38015},
	Address = {New York, NY, USA},
	Author = {Jones, M. and Banerjee, P.},
	Booktitle = {Proceedings of the 24th ACM/IEEE Design Automation Conference},
	Doi = {10.1145/37888.38015},
	Isbn = {0-8186-0781-5},
	Location = {Miami Beach, Florida, United States},
	Numpages = {7},
	Pages = {807--813},
	Publisher = {ACM},
	Series = {DAC '87},
	Title = {Performance of a parallel algorithm for standard cell placement on the Intel hypercube},
	Url = {http://doi.acm.org/10.1145/37888.38015},
	Year = {1987},
	Bdsk-Url-1 = {http://doi.acm.org/10.1145/37888.38015},
	Bdsk-Url-2 = {http://dx.doi.org/10.1145/37888.38015}}

@inproceedings{Lee:1992:HEP:113938.149481,
	Acmid = {149481},
	Address = {Los Alamitos, CA, USA},
	Author = {Lee, H. K. and Ha, D. S.},
	Booktitle = {Proceedings of the 29th ACM/IEEE Design Automation Conference},
	Isbn = {0-89791-516-X},
	Location = {Anaheim, California, United States},
	Numpages = {5},
	Pages = {336--340},
	Publisher = {IEEE Computer Society Press},
	Series = {DAC '92},
	Title = {HOPE: an efficient parallel fault simulator for synchronous sequential circuits},
	Url = {http://dl.acm.org/citation.cfm?id=113938.149481},
	Year = {1992},
	Bdsk-Url-1 = {http://dl.acm.org/citation.cfm?id=113938.149481}}

                  @inproceedings{Tiwary060031,
Author={Tiwary, S. K. and Tiwary, P. K. and Rutenbar, R. A.},
Title={Generation of Yield-Aware {Pareto} Surfaces for Hierarchical Circuit Design Space Exploration},
Booktitle={DAC},
Year={2006},
Pages={31--36}}

@inproceedings{Hwu:2007:IPP:1278480.1278669,
	Acmid = {1278669},
	Address = {New York, NY, USA},
	Author = {Hwu, Wen-mei and Ryoo, Shane and Ueng, Sain-Zee and Kelm, John H. and Gelado, Isaac and Stone, Sam S. and Kidd, Robert E. and Baghsorkhi, Sara S. and Mahesri, Aqeel A. and Tsao, Stephanie C. and Navarro, Nacho and Lumetta, Steve S. and Frank, Matthew I. and Patel, Sanjay J.},
	Booktitle = {Proceedings of the 44th annual Design Automation Conference},
	Doi = {10.1145/1278480.1278669},
	Isbn = {978-1-59593-627-1},
	Keywords = {parallel programming},
	Location = {San Diego, California},
	Numpages = {6},
	Pages = {754--759},
	Publisher = {ACM},
	Series = {DAC '07},
	Title = {Implicitly parallel programming models for thousand-core microprocessors},
	Url = {http://doi.acm.org/10.1145/1278480.1278669},
	Year = {2007},
	Bdsk-Url-1 = {http://doi.acm.org/10.1145/1278480.1278669},
	Bdsk-Url-2 = {http://dx.doi.org/10.1145/1278480.1278669}}

@inproceedings{Palczewski:1992:PPM:113938.149679,
	Acmid = {149679},
	Address = {Los Alamitos, CA, USA},
	Author = {Palczewski, M.},
	Booktitle = {Proceedings of the 29th ACM/IEEE Design Automation Conference},
	Isbn = {0-89791-516-X},
	Location = {Anaheim, California, United States},
	Numpages = {7},
	Pages = {691--697},
	Publisher = {IEEE Computer Society Press},
	Series = {DAC '92},
	Title = {Plane parallel a maze router and its application to FPGAs},
	Url = {http://dl.acm.org/citation.cfm?id=113938.149679},
	Year = {1992},
	Bdsk-Url-1 = {http://dl.acm.org/citation.cfm?id=113938.149679}}

@inproceedings{Sargent890590,
	Acmid = {74482},
	Address = {New York, NY, USA},
	Author = {Sargent, J. S. and Banerjee, P.},
	Booktitle = {Proceedings of the 26th ACM/IEEE Design Automation Conference},
	Doi = {10.1145/74382.74482},
	Isbn = {0-89791-310-8},
	Location = {Las Vegas, Nevada, United States},
	Numpages = {4},
	Pages = {590--593},
	Publisher = {ACM},
	Series = {DAC '89},
	Title = {A parallel row-based algorithm for standard cell placement with integrated error control},
	Url = {http://doi.acm.org/10.1145/74382.74482},
	Year = {1989},
	Bdsk-Url-1 = {http://doi.acm.org/10.1145/74382.74482},
	Bdsk-Url-2 = {http://dx.doi.org/10.1145/74382.74482}}

@inproceedings{Narayanan:1989:MPA:74382.74516,
	Acmid = {74516},
	Address = {New York, NY, USA},
	Author = {Narayanan, V. and Pitchumani, V.},
	Booktitle = {Proceedings of the 26th ACM/IEEE Design Automation Conference},
	Doi = {10.1145/74382.74516},
	Isbn = {0-89791-310-8},
	Location = {Las Vegas, Nevada, United States},
	Numpages = {4},
	Pages = {734--737},
	Publisher = {ACM},
	Series = {DAC '89},
	Title = {A massively parallel algorithm for fault simulation on the connection machine},
	Url = {http://doi.acm.org/10.1145/74382.74516},
	Year = {1989},
	Bdsk-Url-1 = {http://doi.acm.org/10.1145/74382.74516},
	Bdsk-Url-2 = {http://dx.doi.org/10.1145/74382.74516}}

@inproceedings{Adshead820339,
	Acmid = {809227},
	Address = {Piscataway, NJ, USA},
	Author = {Adshead, H. G.},
	Booktitle = {Proceedings of the 19th Design Automation Conference},
	Isbn = {0-89791-020-6},
	Numpages = {6},
	Pages = {339--344},
	Publisher = {IEEE Press},
	Series = {DAC '82},
	Title = {Towards VLSI complexity: The DA algorithm scaling problem: can special DA hardware help?},
	Url = {http://dl.acm.org/citation.cfm?id=800263.809227},
	Year = {1982},
	Bdsk-Url-1 = {http://dl.acm.org/citation.cfm?id=800263.809227}}

@article{Keller020207,
	Author = {Keller, A. and Purvine, S. and Nesvizhskii, A.I. and Stolyar, S. and Goodlett, D.R. and Kolker, E.},
	Journal = {Omics: a journal of integrative biology},
	Number = {2},
	Pages = {207--212},
	Publisher = {Mary Ann Liebert, Inc.},
	Title = {Experimental protein mixture for validating tandem mass spectral analysis},
	Volume = {6},
	Year = {2002}}

@article{Lin113773,
	Author = {Lin, W. and Wu, F.X. and Shi, J. and Ding, J. and Zhang, W.},
	Date-Added = {2012-10-19 14:30:23 +0000},
	Date-Modified = {2012-10-19 14:32:34 +0000},
	Journal = {Proteomics},
	Number = {19},
	Pages = {3773--3778},
	Title = {An adaptive approach to denoising tandem mass spectra},
	Volume = {11},
	Year = {2011}}

@article{Wielsh062448,
	Author = {Wielsch, N. and Thomas, H. and Surendranath, V. and Waridel, P. and Frank, A. and Pevzner, P. and Shevchenko, A.},
	Date-Added = {2012-10-19 02:07:22 +0000},
	Date-Modified = {2012-10-19 02:09:16 +0000},
	Journal = {Journal of proteome research},
	Number = {9},
	Pages = {2448-2456},
	Title = {Rapid validation of protein identifications with the borderline statistical confidence via de novo sequencing and MS BLAST searches},
	Volume = {5},
	Year = {2006}}

@article{Allmer110645,
	Author = {J. Allmer},
	Date-Added = {2012-06-13 12:39:39 -0400},
	Date-Modified = {2012-06-13 12:40:38 -0400},
	Journal = {Expert Rev. Proteomics},
	Number = {5},
	Title = {Algorithms for the de novo sequencing of peptides from tandem mass spectra},
	Volume = {8},
	Year = {2011}}

@inbook{Hughes080104,
	Author = {C. Hughes and B. Ma and G. A. Lajoie},
	Chapter = {De Novo Sequencing Methods in Proteomics},
	Date-Added = {2012-06-13 12:37:18 -0400},
	Date-Modified = {2012-06-13 12:39:25 -0400},
	Editor = {S. J. Hubbard and A. R. Jones},
	Publisher = {Humana Press},
	Title = {Proteome Bioinformatics},
	Year = {2008}}

@article{Wong091405,
	Author = {C. L. Wong and D. Cociorva and J. D. Venable and T. Xu and J. R. Yates, III},
	Date-Added = {2012-06-13 12:35:16 -0400},
	Date-Modified = {2012-06-13 12:36:43 -0400},
	Journal = {J. Am. Soc. Mass Spectrom.},
	Number = {8},
	Pages = {1405--1414},
	Title = {Comparison of Different Signal Thresholds on Data Dependent Sampling in Orbitrap and {LTQ} Mass Spectrometry for the Identification of Peptides and Proteins in Complex Mixtures},
	Volume = {20},
	Year = {2009}}

@article{Zubarev080001,
	Author = {R. A. Zubarev and A. R. Zubarev and M. M. Savitski},
	Date-Added = {2012-06-13 12:30:41 -0400},
	Date-Modified = {2012-06-13 12:34:48 -0400},
	Journal = {J. Am. Soc. Mass Spectrom.},
	Number = {6},
	Pages = {753-761},
	Title = {Electron Capture/Transfer versus Collisionally Activated/Induced Dissociations: Solo or Duet?},
	Volume = {19},
	Year = {2008}}

@inproceedings{Gallia120001,
	Author = {J. Gallia and K. Lavrich and R. McGough and A. Tan-Wilson and P. H. Madden},
	Booktitle = {{ICCABS}},
	Date-Added = {2012-06-13 12:27:48 -0400},
	Date-Modified = {2012-06-13 12:30:24 -0400},
	Title = {Filtering of {MS/MS} data for peptide identification},
	Year = {2012}}
@misc{Bahar15,
Author={R. I. Bahar and A. K. Jones and S. Katkoori and P. H. Madden and D. Marculescu and I. L. Markov},
Title={Workshops on Extreme Scale Design Autiomation {(ESDA)}: Challenges and Opportunities for 2025 and Beyond ({CRA/CCC} Workshop Report)},
Url = {http://cra.org/ccc/wp-content/uploads/sites/2/2015/05/CCC_ESDA-Report.pdf},
Year={2015}}                
@article{Choo070001,
	Author = {K. W. Choo and W. M. Tham},
	Date-Added = {2012-06-13 12:07:59 -0400},
	Date-Modified = {2012-06-13 12:26:50 -0400},
	Journal = {{BMC} Bioinformatics},
	Title = {Tandem mass spectrometry data quality assessment by self-convolution},
	Year = {2007}}

@article{Balgley071599,
	Author = {B. M. Balgely and T Laudeman and L Yang and T Song and C. S. Lee},
	Date-Added = {2012-06-13 12:06:15 -0400},
	Date-Modified = {2012-06-13 12:07:41 -0400},
	Journal = {Molecular and Cellular Proteomics},
	Number = {9},
	Title = {Comparative Evaluation of Tandem {MS} Search Algorithms Using a Target-Decoy Search Stretegy},
	Volume = {6},
	Year = {2007}}

@article{Wong070001,
	Author = {Wong, J. W.-H. and Sullivan, M. J. and Cartwright, H. M. and Cagney, G.},
	Date-Added = {2012-06-13 12:04:10 -0400},
	Date-Modified = {2012-06-13 12:05:12 -0400},
	Journal = {{BMC} Bioinformatics},
	Title = {msmsEval: tandem mass spectral quality assignment for high-throughput proteomics},
	Year = {2007}}

@article{Purvine040255,
	Author = {Purvine, S. and Kolker, N. and Kolker, E.},
	Date-Added = {2012-02-05 04:17:49 +0000},
	Date-Modified = {2012-02-05 04:19:43 +0000},
	Journal = {Omics: a journal of integrative biology},
	Number = {3},
	Pages = {255--265},
	Title = {Spectral quality assessment for high-throughput tandem mass spectrometry proteomics},
	Volume = {8},
	Year = {2004}}

@inproceedings{Lin100089,
	Author = {Lin, W. and Wu, F.X. and Shi, J. and Ding, J. and Zhang, W.},
	Booktitle = {Bioinformatics and Biomedicine Workshops (BIBMW), 2010 IEEE International Conference on},
	Date-Added = {2012-02-05 03:26:58 +0000},
	Date-Modified = {2012-02-05 03:28:12 +0000},
	Organization = {IEEE},
	Pages = {89--94},
	Title = {An adaptive approach to denoising tandem mass spectra},
	Year = {2010}}

@article{Flikka062086,
	Author = {Flikka, K. and Martens, L. and Vandekerckhove, J. and Gevaert, K. and Eidhammer, I.},
	Date-Added = {2012-02-05 03:01:26 +0000},
	Date-Modified = {2012-02-05 03:04:18 +0000},
	Journal = {Proteomics},
	Number = {7},
	Pages = {2086--2094},
	Title = {Improving the reliability and throughput of mass spectrometry-based proteomics by spectrum quality filtering},
	Volume = {6},
	Year = {2006}}

@article{Wong070051,
	Author = {Wong, J. and Sullivan, M. and Cartwright, H. and Cagney, G.},
	Date-Added = {2012-02-05 02:40:40 +0000},
	Date-Modified = {2012-02-05 02:41:57 +0000},
	Journal = {{BMC} Bioinformatics},
	Number = {1},
	Pages = {51},
	Title = {msmsEval: tandem mass spectral quality assignment for high-throughput proteomics},
	Volume = {8},
	Year = {2007}}

@article{Pancake960018,
	Acmid = {615414},
	Address = {Los Alamitos, CA, USA},
	Author = {Pancake, Cherri M.},
	Doi = {10.1109/99.503307},
	Issn = {1070-9924},
	Issue_Date = {June 1996},
	Journal = {IEEE Comput. Sci. Eng.},
	Month = jun,
	Number = {2},
	Numpages = {20},
	Pages = {18--37},
	Publisher = {IEEE Computer Society Press},
	Title = {Is Parallelism for You?},
	Url = {http://dx.doi.org/10.1109/99.503307},
	Volume = {3},
	Year = {1996},
	Bdsk-Url-1 = {http://dx.doi.org/10.1109/99.503307}}

@article{Ding090001,
	Author = {Ding, J. and Shi, J. and Poirier, G. G. and Wu, F.-X.},
	Date-Added = {2012-02-05 02:37:12 +0000},
	Date-Modified = {2012-02-05 02:39:41 +0000},
	Journal = {Proteome Science},
	Title = {A novel approach to denoising ion trap tandem mass spectra},
	Volume = {7},
	Year = {2009}}

@book{kuehl00,
	Author = {R. O. Kuehl},
	Date-Added = {2012-01-03 22:09:44 -0500},
	Date-Modified = {2012-01-03 22:11:18 -0500},
	Publisher = {Duxbury/Thomson Learning},
	Title = {Design of Experiments: Statistical Principles of Research Design Analysis},
	Year = {2000}}

@book{chihara78,
	Author = {T. S. Chihara},
	Date-Added = {2012-01-03 21:51:17 -0500},
	Date-Modified = {2012-01-03 21:52:58 -0500},
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	Title = {An Introduction to Orthogonal Polynomials},
	Year = {1978}}

@misc{pearson70,
	Author = {E.S. Pearson and H. O. Hartley},
	Date-Added = {2011-12-20 19:37:03 -0500},
	Date-Modified = {2011-12-20 19:38:51 -0500},
	Title = {Biometrika Tables for Statisticians},
	Year = {1970}}

@book{seber03,
	Author = {George A. F. Seber and Alan J. Lee},
	Date-Added = {2011-12-20 19:08:32 -0500},
	Date-Modified = {2011-12-20 19:10:33 -0500},
	Publisher = {Wiley},
	Title = {Linear Regression Analysis Second Edition},
	Year = {2003}}

@book{chebyshev53,
	Author = {Chebyshev, P. L.},
	Date-Added = {2011-12-20 19:03:40 -0500},
	Date-Modified = {2011-12-20 19:06:33 -0500},
	Publisher = {Imprimerie de l'Academie imperiale des sciences},
	Title = {Theories des mecanismes connus sous le nom de parallelogrammes},
	Year = {1853}}

@article{Xu100436,
	Author = {Xu, H. and Freitas, M.},
	Date-Added = {2011-12-20 15:42:09 -0500},
	Date-Modified = {2011-12-20 15:47:46 -0500},
	Journal = {{BMC} Bioinformatics},
	Number = {1},
	Pages = {436},
	Title = {A Dynamic Noise Level Algorithm for Spectral Screening of Peptide MS/MS Spectra},
	Volume = {11},
	Year = {2010}}

@inproceedings{Hadzic080448,
	Acmid = {1431573},
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	Annote = {Donald: I don't want to duck your question entirely. I might as well flame a bit about my personal unhappiness with the current trend toward multicore architecture. To me, it looks more or less like the hardware designers have run out of ideas, and that they're trying to pass the blame for the future demise of Moore's Law to the software writers by giving us machines that work faster only on a few key benchmarks! I won't be surprised at all if the whole multithreading idea turns out to be a flop, worse than the \"Itanium\" approach that was supposed to be so terrific---until it turned out that the wished-for compilers were basically impossible to write. Let me put it this way: During the past 50 years, I've written well over a thousand programs, many of which have substantial size. I can't think of even five of those programs that would have been enhanced noticeably by parallelism or multithreading. Surely, for example, multiple processors are no help to TeX.[1]},
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@inbook{Agnihotri08,
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@book{Kellerer04,
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@conference{Kahng900428,
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@conference{Kahng910322,
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@conference{Kahng940164,
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@conference{Kahng940213,
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	Year = {1994}}

@conference{Kahng940440,
	Author = {A. B. Kahng and C.-W. A. Tsao},
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	Year = {1994}}

@conference{Kahng950105,
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@techreport{Kahng95tr,
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@article{Kahng960008,
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	Year = {1996}}

@conference{Kahng960030,
	Author = {A. B. Kahng and K. Masuko and S. Muddu},
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	Year = {1996}}

@conference{Kahng960202,
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@conference{Kahng964237,
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	Year = {1996}}

@conference{Kahng970000b,
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@conference{Kahng980095,
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@conference{Kahng980190,
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@conference{Kahng980471,
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	Title = {Practical Bounded-Skew Clock Routing},
	Year = {1997}}

@conference{Kahng990799,
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	Title = {Subwavelength Lithography and its Potential Impact on Design and EDA},
	Year = {1999}}

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	Numpages = {9},
	Pages = {69--77},
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	Url = {http://dl.acm.org/citation.cfm?id=318013.318025},
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	Isbn = {0-89791-341-8},
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	Year = {1989},
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	Year = {1989},
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	Doi = {10.1145/602770.602890},
	Isbn = {0-8186-6605-6},
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	Year = {1986}}

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	Doi = {10.1145/277650.277723},
	Isbn = {0-89791-987-4},
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@inproceedings{Hiranandani920001,
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	Doi = {10.1145/143369.143372},
	Isbn = {0-89791-485-6},
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@inproceedings{Hiranandani910086,
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	Doi = {10.1145/125826.125886},
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	Isbn = {0-8186-0861-1},
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	Isbn = {1-58113-100-3},
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@article{Catania091544,
	Acmid = {1400116},
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	Articleno = {11},
	Author = {Vincenzo Catania and Maurizio Palesi and Davide Patti},
	Doi = {10.1145/1400112.1400116},
	Issn = {1544-3566},
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	Keywords = {ILP; VLIW architectures; design space exploration; energy; genetic algorithms; hyperblock formation; multiobjective optimization; performances; power; statistical analysis},
	Month = {September},
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	Numpages = {33},
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	Booktitle = {Proceedings of the 45th annual Design Automation Conference},
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	Location = {Anaheim, California},
	Numpages = {4},
	Pages = {966--969},
	Publisher = {ACM},
	Series = {DAC '08},
	Title = {Efficient system design space exploration using machine learning techniques},
	Url = {http://doi.acm.org/10.1145/1391469.1391712},
	Year = {2008},
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	Doi = {10.1145/1854273.1854308},
	Isbn = {978-1-4503-0178-7},
	Keywords = {bottleneck analysis; criticality model; design space exploration; simulated annealing; superscalar processors},
	Location = {Vienna, Austria},
	Numpages = {12},
	Pages = {261--272},
	Publisher = {ACM},
	Series = {PACT '10},
	Title = {Criticality-driven superscalar design space exploration},
	Url = {http://doi.acm.org/10.1145/1854273.1854308},
	Year = {2010},
	Bdsk-Url-1 = {http://doi.acm.org/10.1145/1854273.1854308},
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	Author = {Joachim Keinert and Martin Streub\&uhorbar;hr and Thomas Schlichter and Joachim Falk and Jens Gladigau and Christian Haubelt and J\&uhorbar;rgen Teich and Michael Meredith},
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	Journal = {ACM Trans. Des. Autom. Electron. Syst.},
	Keywords = {System design; hardware/software codesign},
	Month = {January},
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	Numpages = {23},
	Pages = {1:1--1:23},
	Publisher = {ACM},
	Title = {SystemCoDesigner -- an automatic ESL synthesis approach by design space exploration and behavioral synthesis for streaming applications},
	Url = {http://doi.acm.org/10.1145/1455229.1455230},
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	Acmid = {1131578},
	Address = {3001 Leuven, Belgium, Belgium},
	Author = {Stijn Eyerman and Lieven Eeckhout and Koen De Bosschere},
	Booktitle = {Proceedings of the conference on Design, automation and test in Europe: Proceedings},
	Isbn = {3-9810801-0-6},
	Location = {Munich, Germany},
	Numpages = {6},
	Pages = {351--356},
	Publisher = {European Design and Automation Association},
	Series = {DATE '06},
	Title = {Efficient design space exploration of high performance embedded out-of-order processors},
	Url = {http://portal.acm.org/citation.cfm?id=1131481.1131578},
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@inproceedings{Mohanty020018,
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	Author = {S. Mohanty and V. K. Prasanna and S. Neema and J. Davis},
	Booktitle = {Proceedings of the joint conference on Languages, compilers and tools for embedded systems: software and compilers for embedded systems},
	Doi = {10.1145/513829.513835},
	Isbn = {1-58113-527-0},
	Keywords = {binary decision diagram; design space; model integrated computing; modeling; multi-granular simulation; performance estimation; symbolic search},
	Location = {Berlin, Germany},
	Numpages = {10},
	Pages = {18--27},
	Publisher = {ACM},
	Series = {LCTES/SCOPES '02},
	Title = {Rapid design space exploration of heterogeneous embedded systems using symbolic search and multi-granular simulation},
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	Year = {2002},
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@inproceedings{Mariani100120,
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	Address = {New York, NY, USA},
	Author = {Giovanni Mariani and Aleksandar Brankovic and Gianluca Palermo and Jovana Jovic and Vittorio Zaccaria and Cristina Silvano},
	Booktitle = {Proceedings of the 47th Design Automation Conference},
	Doi = {10.1145/1837274.1837307},
	Isbn = {978-1-4503-0002-5},
	Keywords = {design space exploration; kriging; multi-processor systems-on-chip; response surface},
	Location = {Anaheim, California},
	Numpages = {6},
	Pages = {120--125},
	Publisher = {ACM},
	Series = {DAC '10},
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	Bdsk-Url-1 = {http://doi.acm.org/10.1145/1837274.1837307},
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@inproceedings{Haubelt030525,
	Acmid = {1119882},
	Address = {New York, NY, USA},
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	Booktitle = {Proceedings of the 2003 Asia and South Pacific Design Automation Conference},
	Doi = {10.1145/1119772.1119882},
	Isbn = {0-7803-7660-9},
	Location = {Kitakyushu, Japan},
	Numpages = {7},
	Pages = {525--531},
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	Url = {http://doi.acm.org/10.1145/1119772.1119882},
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@inproceedings{Azizi100250,
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	Author = {Omid Azizi and Aqeel Mahesri and John P. Stevenson and Sanjay J. Patel and Mark Horowitz},
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	Isbn = {978-3-9810801-6-2},
	Location = {Dresden, Germany},
	Numpages = {6},
	Pages = {250--255},
	Series = {DATE '10},
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@inproceedings{Lukasiewycz090691,
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	Booktitle = {Proceedings of the 2008 Asia and South Pacific Design Automation Conference},
	Isbn = {978-1-4244-1922-7},
	Location = {Seoul, Korea},
	Numpages = {6},
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	Series = {ASP-DAC '08},
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	Url = {http://portal.acm.org/citation.cfm?id=1356802.1356969},
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@inproceedings{Palermo090323,
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	Isbn = {978-1-4244-2748-2},
	Location = {Yokohama, Japan},
	Numpages = {6},
	Pages = {323--328},
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	Series = {ASP-DAC '09},
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@inproceedings{Chou090015,
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	Numpages = {6},
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	Keywords = {canonical representation; formal methodology; hierarchical design exploration; performance; power; probabilistic},
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	Numpages = {6},
	Pages = {229--234},
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	Url = {http://doi.acm.org/10.1145/1127908.1127962},
	Year = {2006},
	Bdsk-Url-1 = {http://doi.acm.org/10.1145/1127908.1127962},
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	Isbn = {978-1-4503-0012-4},
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	Numpages = {4},
	Pages = {107--110},
	Publisher = {ACM},
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	Url = {http://doi.acm.org/10.1145/1785481.1785507},
	Year = {2010},
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%%
% Added by Jinwook


@misc{ieee-datc,
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@misc{rdf-calibration-repo,
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@inproceedings{chen:2019da,
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@inproceedings{Darav15,
Author = {N. K. Darav and A. Kennings and D. Westwick and L. Behjat},
title={High performance global placement legalization accounting for fence regions},
booktitle={ICCAD},
year={2015},
pages={514-519}}

@article{Darav16,
Author={N. K. Darav and A. Kennings and A. Fakheri Tabrizi and D. Westwick and L. Behjat},
title={{Eh?Placer}: A High-Performance Modern Technology-Driven Placer},
journal={{ACM} Trans. Design Automation of Electronic Systems},
Month={July},
Year={2016},
Volume={21}}

@inproceedings{Huang15,
Author ={C. Huang and C.-H. Chiou and K.-H. Tseng and Y. Chang},
title={Detailed-Routing-Driven Analytical Standard-Cell Placement},
booktitle={PRoc. ASPDAC},
year={2015},
pages={378-383}
}

@inproceedings{Yutsis14,
Author={V. Yutsis and I. S. Bustany and D. Chinnery and J. R. Shinnerl and W.-H. Liu},
title={{ISPD 2014} Benchmarks with Sub-45nm Technology Rules for Detailed-Routing-Driven Placement},
booktitle={Proc. ISPD},
year={2014},
pages={161--168}}

@inproceedings{Bustany15,
Author={I. S. Bustany and D. Chinnery and J. R. Shinnerl and V. Yutsis},
title={{ISPD 2015} Benhmarks with Fence Regions and Routing Blockages for Detailed-Routing-Driven Placement},
booktitle={Proc. ISPD},
year={2015},
pages={157-164}}

@inproceedings{Nam05, author = {Nam, Gi-Joon and Alpert, Charles J. and Villarrubia, Paul and Winter, Bruce and Yildiz, Mehmet}, title = {The ISPD2005 Placement Contest and Benchmark Suite}, year = {2005}, isbn = {1595930213}, publisher = {Association for Computing Machinery}, address = {New York, NY, USA}, url = {https://doi.org/10.1145/1055137.1055182}, doi = {10.1145/1055137.1055182}, abstract = {Without the MCNC and ISPD98 benchmarks, it would arguably not have been possible for the academic community to make consistent advances in physical design over the last decade. While still being used extensively in placement and floorplanning research, those benchmarks can no longer be considered representative of today's (and tomorrow's) physical design challenges. In order to drive physical design research over the next few years, a new benchmark suit is being released in conjunction with the ISPD2005 placement contest. These benchmarks are directly derived from industrial ASIC designs, with circuit sizes ranging from 210 thousand to 2.1 million placeable objects. Unlike the ISPD98 benchmarks, the physical structure of these designs is completely preserved, giving realistic challenging designs for today's placement tools. Hopefully, these benchmarks will help accelerate new physical design research in the placement, floor-planning, and routing.}, booktitle = {Proceedings of the 2005 International Symposium on Physical Design}, pages = {216–220}, numpages = {5}, keywords = {benchmarks, VLSI placement, physical design}, location = {San Francisco, California, USA}, series = {ISPD '05} }

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