Merge pull request #181 from promised-ai/release/0.7.0

Release/0.7.0
promised-ai · Feb 7, 2024 · 408d4de · 408d4de
2 parents d66cb65 + 8937715
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diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -7,20 +7,39 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 
 ## [Unreleased]
 
+## [python-0.7.0] - 2024-02-07
+
+### Added
+
+- `Engine.update` uses `tqdm.auto` for progress bar reporting, to support progress bars in notebooks
+- Added `flat_columns` option to `Engine` constructor to enable creating engines with one view
+- Added `variability` method to `Engine`
+
+### Changed
+
+- Improved errors in type conversions.
+- Rearranged test execution
+
+### Fixed
+
+- Default transition sets now hit all required transitions
+- Fixed typo in internal `Dimension` class
+
+## [rust-0.7.0] - 2024-02-07
+
 ### Added
+
 - `DataParseError::CodebookAndDataRowsMismatch` variant for when the number of rows in the codebook and the number of rows in the data do not match.
 - `DataParseError::DataFrameMissingColumn` variant for when a column is in the codebook but not in the initial dataframe.
-- Python's `Engine.update` uses `tqdm.auto` for progress bar reporting.
-- Added `flat_columns` option to pylace `Engine` constructor to enable creating engines with one view
+- Added `variability` method to `OraceT` trait
 
 ### Changed
+
 - Added parallelism to `Slice` row reassignment kernel. Run time is ~6x faster.
-- (Python) Improved errors in type conversions.
 
 ### Fixed
-- Initializing an engine with a codebook that has a different number of rows than the data will result in an error instead of printing a bunch on nonsense.
-- Pylace default transition sets didn't hit all required transitions
-- Typo in pylace internal `Dimension` class
+
+- Initializing an engine with a codebook that has a different number of rows than the data will result in an error instead of printing a bunch of nonsense.
 
 ## [python-0.6.0] - 2024-01-23
 
@@ -242,7 +261,9 @@ Initial release on [PyPi](https://pypi.org/)
 
 Initial release on [crates.io](https://crates.io/)
 
-[unreleased]: https://github.com/promised-ai/lace/compare/python-0.6.0...HEAD
+[unreleased]: https://github.com/promised-ai/lace/compare/python-0.7.0...HEAD
+[python-0.7.0]: https://github.com/promised-ai/lace/compare/python-0.6.0...python-0.7.0
+[rust-0.7.0]: https://github.com/promised-ai/lace/compare/rust-0.6.0...rust-0.7.0
 [python-0.6.0]: https://github.com/promised-ai/lace/compare/python-0.5.0...python-0.6.0
 [rust-0.6.0]: https://github.com/promised-ai/lace/compare/rust-0.5.0...rust-0.6.0
 [python-0.5.0]: https://github.com/promised-ai/lace/compare/python-0.4.1...python-0.5.0

diff --git a/CITATION.cff b/CITATION.cff
@@ -34,5 +34,5 @@ keywords:
   - Bayesian
   - Machine Learning
 license: BUSL-1.1
-version: 0.6.0
-date-released: '2024-01-23'
+version: 0.7.0
+date-released: '2024-02-07'
diff --git a/book/lace_preprocess_mdbook_yaml/Cargo.toml b/book/lace_preprocess_mdbook_yaml/Cargo.toml
@@ -16,8 +16,8 @@ path = "src/main.rs"
 anyhow = "1.0"
 clap = "4.2"
 env_logger = "0.10"
-lace_codebook = { path = "../../lace/lace_codebook", version = "0.5.0" }
-lace_stats = { path = "../../lace/lace_stats", version = "0.2.1" }
+lace_codebook = { path = "../../lace/lace_codebook", version = "0.6.0" }
+lace_stats = { path = "../../lace/lace_stats", version = "0.3.0" }
 log = "0.4"
 mdbook = "0.4"
 pulldown-cmark = { version = "0.9", default-features = false }

diff --git a/cli/Cargo.toml b/cli/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "lace-cli"
-version = "0.6.0"
+version = "0.7.0"
 authors = ["Promised AI"]
 edition = "2021"
 rust-version = "1.62.0"
@@ -17,7 +17,7 @@ name = "lace"
 path = "src/main.rs"
 
 [dependencies]
-lace = { path = "../lace", version = "0.6.0", features = ["formats", "ctrlc_handler"]}
+lace = { path = "../lace", version = "0.7.0", features = ["formats", "ctrlc_handler"]}
 clap = { version = "4.3.17", features = ["derive"] }
 env_logger = "0.10"
 serde_yaml = "0.9.4"

diff --git a/lace/Cargo.lock b/lace/Cargo.lock
diff --git a/lace/Cargo.toml b/lace/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "lace"
-version = "0.6.0"
+version = "0.7.0"
 authors = ["Promised AI"]
 build = "build.rs"
 edition = "2021"
@@ -31,14 +31,14 @@ name = "lace"
 path = "src/lib.rs"
 
 [dependencies]
-lace_cc = { path = "lace_cc", version = "0.5.0" }
-lace_utils = { path = "lace_utils", version = "0.2.0" }
-lace_stats = { path = "lace_stats", version = "0.2.1" }
-lace_codebook = { path = "lace_codebook", version = "0.5.0", default_features=false}
-lace_geweke = { path = "lace_geweke", version = "0.2.1" }
+lace_cc = { path = "lace_cc", version = "0.6.0" }
+lace_utils = { path = "lace_utils", version = "0.3.0" }
+lace_stats = { path = "lace_stats", version = "0.3.0" }
+lace_codebook = { path = "lace_codebook", version = "0.6.0", default_features=false}
+lace_geweke = { path = "lace_geweke", version = "0.3.0" }
 lace_consts = { path = "lace_consts", version = "0.2.1" }
-lace_data = { path = "lace_data", version = "0.2.0" }
-lace_metadata = { path = "lace_metadata", version = "0.5.0" }
+lace_data = { path = "lace_data", version = "0.3.0" }
+lace_metadata = { path = "lace_metadata", version = "0.6.0" }
 dirs = { version="5", optional = true}
 num = "0.4"
 rand_xoshiro = { version="0.6", features = ["serde1"] }

diff --git a/lace/lace_cc/Cargo.toml b/lace/lace_cc/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "lace_cc"
-version = "0.5.0"
+version = "0.6.0"
 authors = ["Promised AI"]
 edition = "2021"
 exclude = ["tests/*", "resources/test/*", "target/*"]
@@ -10,12 +10,12 @@ repository = "https://github.com/promised-ai/lace"
 description = "Core of the Lace cross-categorization engine library"
 
 [dependencies]
-lace_utils = { path = "../lace_utils", version = "0.2.0" }
-lace_stats = { path = "../lace_stats", version = "0.2.1" }
-lace_geweke = { path = "../lace_geweke", version = "0.2.1" }
+lace_utils = { path = "../lace_utils", version = "0.3.0" }
+lace_stats = { path = "../lace_stats", version = "0.3.0" }
+lace_geweke = { path = "../lace_geweke", version = "0.3.0" }
 lace_consts = { path = "../lace_consts", version = "0.2.1" }
-lace_data = { path = "../lace_data", version = "0.2.0" }
-lace_codebook = { path = "../lace_codebook", version = "0.5.0" }
+lace_data = { path = "../lace_data", version = "0.3.0" }
+lace_codebook = { path = "../lace_codebook", version = "0.6.0" }
 rand = {version="0.8", features=["serde1"]}
 rayon = "1.5"
 serde = { version = "1", features = ["derive"] }

diff --git a/lace/lace_codebook/Cargo.toml b/lace/lace_codebook/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "lace_codebook"
-version = "0.5.0"
+version = "0.6.0"
 authors = ["Promised.ai"]
 edition = "2021"
 license = "BUSL-1.1"
@@ -10,9 +10,9 @@ description = "Contains the Lace codebook specification as well as utilities for
 
 [dependencies]
 lace_consts = { path = "../lace_consts", version = "0.2.1" }
-lace_stats = { path = "../lace_stats", version = "0.2.1" }
-lace_utils = { path = "../lace_utils", version = "0.2.0" }
-lace_data = { path = "../lace_data", version = "0.2.0" }
+lace_stats = { path = "../lace_stats", version = "0.3.0" }
+lace_utils = { path = "../lace_utils", version = "0.3.0" }
+lace_data = { path = "../lace_data", version = "0.3.0" }
 serde = { version = "1", features = ["derive"] }
 serde_yaml = "0.9.4"
 thiserror = "1.0.11"

diff --git a/lace/lace_data/Cargo.toml b/lace/lace_data/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "lace_data"
-version = "0.2.0"
+version = "0.3.0"
 authors = ["Promised AI"]
 edition = "2021"
 license = "BUSL-1.1"
@@ -9,7 +9,7 @@ repository = "https://github.com/promised-ai/lace"
 description = "Data definitions and data container definitions for Lace"
 
 [dependencies]
-lace_utils = { path = "../lace_utils", version = "0.2.0" }
+lace_utils = { path = "../lace_utils", version = "0.3.0" }
 serde = { version = "1", features = ["derive"] }
 thiserror = "1.0.19"
 

diff --git a/lace/lace_geweke/Cargo.toml b/lace/lace_geweke/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "lace_geweke"
-version = "0.2.1"
+version = "0.3.0"
 authors = ["Promised AI"]
 edition = "2021"
 license = "BUSL-1.1"
@@ -9,8 +9,8 @@ repository = "https://github.com/promised-ai/lace"
 description = "Geweke tester for Lace"
 
 [dependencies]
-lace_stats = { path = "../lace_stats", version = "0.2.1" }
-lace_utils = { path = "../lace_utils", version = "0.2.0" }
+lace_stats = { path = "../lace_stats", version = "0.3.0" }
+lace_utils = { path = "../lace_utils", version = "0.3.0" }
 serde = { version = "1", features = ["derive"] }
 serde_yaml = "0.9.4"
 indicatif = "0.17"

diff --git a/lace/lace_metadata/Cargo.toml b/lace/lace_metadata/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "lace_metadata"
-version = "0.5.0"
+version = "0.6.0"
 authors = ["Promised AI"]
 edition = "2021"
 license = "BUSL-1.1"
@@ -9,10 +9,10 @@ repository = "https://github.com/promised-ai/lace"
 description = "Archive of the metadata (savefile) formats for Lace. In charge of versioning and conversion."
 
 [dependencies]
-lace_stats = { path = "../lace_stats", version = "0.2.1" }
-lace_data = { path = "../lace_data", version = "0.2.0" }
-lace_codebook = { path = "../lace_codebook", version = "0.5.0" }
-lace_cc = { path = "../lace_cc", version = "0.5.0" }
+lace_stats = { path = "../lace_stats", version = "0.3.0" }
+lace_data = { path = "../lace_data", version = "0.3.0" }
+lace_codebook = { path = "../lace_codebook", version = "0.6.0" }
+lace_cc = { path = "../lace_cc", version = "0.6.0" }
 serde = { version = "1", features = ["derive"] }
 serde_yaml = "0.9.4"
 serde_json = "1"

diff --git a/lace/lace_stats/Cargo.toml b/lace/lace_stats/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "lace_stats"
-version = "0.2.1"
+version = "0.3.0"
 rust-version = "1.62.0"
 authors = ["Promised AI"]
 edition = "2021"
@@ -10,9 +10,9 @@ repository = "https://github.com/promised-ai/lace"
 description = "Contains component model and hyperprior specifications"
 
 [dependencies]
-lace_utils = { path = "../lace_utils", version = "0.2.0" }
+lace_utils = { path = "../lace_utils", version = "0.3.0" }
 lace_consts = { path = "../lace_consts", version = "0.2.1" }
-lace_data = { path = "../lace_data", version = "0.2.0" }
+lace_data = { path = "../lace_data", version = "0.3.0" }
 special = "0.10"
 rand = {version="0.8", features=["serde1"]}
 itertools = "0.12"

diff --git a/lace/lace_utils/Cargo.toml b/lace/lace_utils/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "lace_utils"
-version = "0.2.0"
+version = "0.3.0"
 authors = ["Promised AI"]
 edition = "2021"
 license = "BUSL-1.1"

diff --git a/pylace/Cargo.toml b/pylace/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "pylace"
-version = "0.6.0"
+version = "0.7.0"
 edition = "2021"
 license = "BUSL-1.1"
 
@@ -9,8 +9,8 @@ name = "lace"
 crate-type = ["cdylib"]
 
 [dependencies]
-lace = { path = "../lace", version="0.6.0" }
-lace_utils = { path = "../lace/lace_utils", version="0.2.0" }
+lace = { path = "../lace", version="0.7.0" }
+lace_utils = { path = "../lace/lace_utils", version="0.3.0" }
 rand = "0.8.5"
 rand_xoshiro = "0.6.0"
 pyo3 = { version = "0.20", features = ["extension-module"] }

diff --git a/pylace/pyproject.toml b/pylace/pyproject.toml
@@ -4,7 +4,7 @@ build-backend = "maturin"
 
 [project]
 name = "pylace"
-version = "0.6.0"
+version = "0.7.0"
 description = "A probabalistic programming ML tool for science"
 requires-python = ">=3.8"
 classifiers = [