.pre-commit-config.yaml

repos:
- repo: https://github.com/pre-commit/pre-commit-hooks
  rev: v4.5.0
  hooks:
  # Prevent committing to the master branch
  - id: no-commit-to-branch
    args: [--branch, master]
  # Format yaml files
  - id: check-yaml
  # Fix end-of-file issues
  - id: end-of-file-fixer
  # Fix trailing whitespace
  - id: trailing-whitespace
  # Prevent debug statements
  - id: debug-statements
  - id: fix-encoding-pragma
  - id: mixed-line-ending
# Code formatting
- repo: https://github.com/ambv/black
  rev: 24.2.0
  hooks:
  - id: black
# Further linting (e.g. module imported but not used)
- repo: https://github.com/PyCQA/flake8
  rev: 7.0.0
  hooks:
  - id: flake8
# Verify that requirements.txt is up to date with poetry dependencies every commit
- repo: https://github.com/python-poetry/poetry
  rev: 1.8.3
  hooks:
    - id: poetry-export
      args: [
        "-f",
        "requirements.txt",
        "--output",
        "requirements.txt",
        "--with",
        "dev",
        "--with",
        "test",
        "--with",
        "docs",
        "-E",
        "clipboard download express gel",
      ]
      files: 'requirements.txt'
# Remove metadata from jupyter notebooks. This will always be triggered when you commit a change in a notebook.
# Simply do `git add` and commit again.
- repo: local
  hooks:
    - id: nbstripout
      name: nbstripout with keep-output
      entry: |
        python -m nbstripout --keep-output $@
      language: system
      files: \.ipynb$
      exclude: tests/