__maintainer__ = "Björn Johansson"
__email__ = "bjorn_johansson@bio.uminho.pt"
__status__ = "Development" # "Production" #"Prototype"
-__version__ = "0.0.0-post.1+e86fc3c"
+__version__ = "0.0.0-post.1+ee53a22"
# create config directory
diff --git a/_modules/pydna/amplicon.html b/_modules/pydna/amplicon.html
index ca3645cf..be3fc25d 100644
--- a/_modules/pydna/amplicon.html
+++ b/_modules/pydna/amplicon.html
@@ -3,7 +3,7 @@
- pydna.amplicon — pydna 0.0.0.post1+e86fc3c documentation
+ pydna.amplicon — pydna 0.0.0.post1+ee53a22 documentation
@@ -14,7 +14,7 @@
-
+
diff --git a/_modules/pydna/amplify.html b/_modules/pydna/amplify.html
index 15346d64..1ddf38f4 100644
--- a/_modules/pydna/amplify.html
+++ b/_modules/pydna/amplify.html
@@ -3,7 +3,7 @@
- pydna.amplify — pydna 0.0.0.post1+e86fc3c documentation
+ pydna.amplify — pydna 0.0.0.post1+ee53a22 documentation
@@ -14,7 +14,7 @@
-
+
diff --git a/_modules/pydna/assembly.html b/_modules/pydna/assembly.html
index 516f4a24..c057b6fb 100644
--- a/_modules/pydna/assembly.html
+++ b/_modules/pydna/assembly.html
@@ -3,7 +3,7 @@
- pydna.assembly — pydna 0.0.0.post1+e86fc3c documentation
+ pydna.assembly — pydna 0.0.0.post1+ee53a22 documentation
@@ -14,7 +14,7 @@
-
+
diff --git a/_modules/pydna/common_sub_strings.html b/_modules/pydna/common_sub_strings.html
index 08a97d4e..74cf5d7f 100644
--- a/_modules/pydna/common_sub_strings.html
+++ b/_modules/pydna/common_sub_strings.html
@@ -3,7 +3,7 @@
- pydna.common_sub_strings — pydna 0.0.0.post1+e86fc3c documentation
+ pydna.common_sub_strings — pydna 0.0.0.post1+ee53a22 documentation
@@ -14,7 +14,7 @@
-
+
diff --git a/_modules/pydna/contig.html b/_modules/pydna/contig.html
index 8656a59d..5a237d3a 100644
--- a/_modules/pydna/contig.html
+++ b/_modules/pydna/contig.html
@@ -3,7 +3,7 @@
- pydna.contig — pydna 0.0.0.post1+e86fc3c documentation
+ pydna.contig — pydna 0.0.0.post1+ee53a22 documentation
@@ -14,7 +14,7 @@
-
+
diff --git a/_modules/pydna/design.html b/_modules/pydna/design.html
index 5a4edc00..01adb036 100644
--- a/_modules/pydna/design.html
+++ b/_modules/pydna/design.html
@@ -3,7 +3,7 @@
- pydna.design — pydna 0.0.0.post1+e86fc3c documentation
+ pydna.design — pydna 0.0.0.post1+ee53a22 documentation
@@ -14,7 +14,7 @@
-
+
@@ -115,7 +115,7 @@ Source code for pydna.design
length = starting_length
tlen = len(template)
- tmp = tm_func(str(template.seq[:length]))
+ tmp = max(0, tm_func(str(template.seq[:length])))
p = str(template.seq[:length])
diff --git a/_modules/pydna/dseq.html b/_modules/pydna/dseq.html
index a63aa281..19caaf78 100644
--- a/_modules/pydna/dseq.html
+++ b/_modules/pydna/dseq.html
@@ -3,7 +3,7 @@
- pydna.dseq — pydna 0.0.0.post1+e86fc3c documentation
+ pydna.dseq — pydna 0.0.0.post1+ee53a22 documentation
@@ -14,7 +14,7 @@
-
+
diff --git a/_modules/pydna/dseqrecord.html b/_modules/pydna/dseqrecord.html
index 6fb70af1..008b7cc7 100644
--- a/_modules/pydna/dseqrecord.html
+++ b/_modules/pydna/dseqrecord.html
@@ -3,7 +3,7 @@
- pydna.dseqrecord — pydna 0.0.0.post1+e86fc3c documentation
+ pydna.dseqrecord — pydna 0.0.0.post1+ee53a22 documentation
@@ -14,7 +14,7 @@
-
+
diff --git a/_modules/pydna/editor.html b/_modules/pydna/editor.html
index 081e731e..f5d836d6 100644
--- a/_modules/pydna/editor.html
+++ b/_modules/pydna/editor.html
@@ -3,7 +3,7 @@
- pydna.editor — pydna 0.0.0.post1+e86fc3c documentation
+ pydna.editor — pydna 0.0.0.post1+ee53a22 documentation
@@ -14,7 +14,7 @@
-
+
diff --git a/_modules/pydna/gel.html b/_modules/pydna/gel.html
index 969f5c05..168e71b7 100644
--- a/_modules/pydna/gel.html
+++ b/_modules/pydna/gel.html
@@ -3,7 +3,7 @@
- pydna.gel — pydna 0.0.0.post1+e86fc3c documentation
+ pydna.gel — pydna 0.0.0.post1+ee53a22 documentation
@@ -14,7 +14,7 @@
-
+
diff --git a/_modules/pydna/genbank.html b/_modules/pydna/genbank.html
index 0d3b6785..0caa1731 100644
--- a/_modules/pydna/genbank.html
+++ b/_modules/pydna/genbank.html
@@ -3,7 +3,7 @@
- pydna.genbank — pydna 0.0.0.post1+e86fc3c documentation
+ pydna.genbank — pydna 0.0.0.post1+ee53a22 documentation
@@ -14,7 +14,7 @@
-
+
diff --git a/_modules/pydna/genbankfile.html b/_modules/pydna/genbankfile.html
index 437e3498..ea2891e8 100644
--- a/_modules/pydna/genbankfile.html
+++ b/_modules/pydna/genbankfile.html
@@ -3,7 +3,7 @@
- pydna.genbankfile — pydna 0.0.0.post1+e86fc3c documentation
+ pydna.genbankfile — pydna 0.0.0.post1+ee53a22 documentation
@@ -14,7 +14,7 @@
-
+
diff --git a/_modules/pydna/genbankfixer.html b/_modules/pydna/genbankfixer.html
index cdd866fb..ba4b0f8b 100644
--- a/_modules/pydna/genbankfixer.html
+++ b/_modules/pydna/genbankfixer.html
@@ -3,7 +3,7 @@
- pydna.genbankfixer — pydna 0.0.0.post1+e86fc3c documentation
+ pydna.genbankfixer — pydna 0.0.0.post1+ee53a22 documentation
@@ -14,7 +14,7 @@
-
+
diff --git a/_modules/pydna/genbankrecord.html b/_modules/pydna/genbankrecord.html
index 7c869fc9..140bdd2f 100644
--- a/_modules/pydna/genbankrecord.html
+++ b/_modules/pydna/genbankrecord.html
@@ -3,7 +3,7 @@
- pydna.genbankrecord — pydna 0.0.0.post1+e86fc3c documentation
+ pydna.genbankrecord — pydna 0.0.0.post1+ee53a22 documentation
@@ -14,7 +14,7 @@
-
+
diff --git a/_modules/pydna/myprimers.html b/_modules/pydna/myprimers.html
index b12d8005..e0306aac 100644
--- a/_modules/pydna/myprimers.html
+++ b/_modules/pydna/myprimers.html
@@ -3,7 +3,7 @@
- pydna.myprimers — pydna 0.0.0.post1+e86fc3c documentation
+ pydna.myprimers — pydna 0.0.0.post1+ee53a22 documentation
@@ -14,7 +14,7 @@
-
+
diff --git a/_modules/pydna/parsers.html b/_modules/pydna/parsers.html
index c6b614b7..61ed599f 100644
--- a/_modules/pydna/parsers.html
+++ b/_modules/pydna/parsers.html
@@ -3,7 +3,7 @@
- pydna.parsers — pydna 0.0.0.post1+e86fc3c documentation
+ pydna.parsers — pydna 0.0.0.post1+ee53a22 documentation
@@ -14,7 +14,7 @@
-
+
diff --git a/_modules/pydna/primer.html b/_modules/pydna/primer.html
index 8c8bb5c1..2d21b98a 100644
--- a/_modules/pydna/primer.html
+++ b/_modules/pydna/primer.html
@@ -3,7 +3,7 @@
- pydna.primer — pydna 0.0.0.post1+e86fc3c documentation
+ pydna.primer — pydna 0.0.0.post1+ee53a22 documentation
@@ -14,7 +14,7 @@
-
+
diff --git a/_modules/pydna/readers.html b/_modules/pydna/readers.html
index 8b2a7352..8a2d3fe6 100644
--- a/_modules/pydna/readers.html
+++ b/_modules/pydna/readers.html
@@ -3,7 +3,7 @@
- pydna.readers — pydna 0.0.0.post1+e86fc3c documentation
+ pydna.readers — pydna 0.0.0.post1+ee53a22 documentation
@@ -14,7 +14,7 @@
-
+
diff --git a/_modules/pydna/seqrecord.html b/_modules/pydna/seqrecord.html
index 9ccf824c..e2a27eeb 100644
--- a/_modules/pydna/seqrecord.html
+++ b/_modules/pydna/seqrecord.html
@@ -3,7 +3,7 @@
- pydna.seqrecord — pydna 0.0.0.post1+e86fc3c documentation
+ pydna.seqrecord — pydna 0.0.0.post1+ee53a22 documentation
@@ -14,7 +14,7 @@
-
+
diff --git a/_modules/pydna/threading_timer_decorator_exit.html b/_modules/pydna/threading_timer_decorator_exit.html
index 8178ce36..caf7e05c 100644
--- a/_modules/pydna/threading_timer_decorator_exit.html
+++ b/_modules/pydna/threading_timer_decorator_exit.html
@@ -3,7 +3,7 @@
- pydna.threading_timer_decorator_exit — pydna 0.0.0.post1+e86fc3c documentation
+ pydna.threading_timer_decorator_exit — pydna 0.0.0.post1+ee53a22 documentation
@@ -14,7 +14,7 @@
-
+
diff --git a/_modules/pydna/tm.html b/_modules/pydna/tm.html
index c713b9c3..764e500a 100644
--- a/_modules/pydna/tm.html
+++ b/_modules/pydna/tm.html
@@ -3,7 +3,7 @@
- pydna.tm — pydna 0.0.0.post1+e86fc3c documentation
+ pydna.tm — pydna 0.0.0.post1+ee53a22 documentation
@@ -14,7 +14,7 @@
-
+
diff --git a/_modules/pydna/utils.html b/_modules/pydna/utils.html
index fab6644f..4082ed7f 100644
--- a/_modules/pydna/utils.html
+++ b/_modules/pydna/utils.html
@@ -3,7 +3,7 @@
- pydna.utils — pydna 0.0.0.post1+e86fc3c documentation
+ pydna.utils — pydna 0.0.0.post1+ee53a22 documentation
@@ -14,7 +14,7 @@
-
+
diff --git a/_static/documentation_options.js b/_static/documentation_options.js
index 3586d5c1..b6f962ba 100644
--- a/_static/documentation_options.js
+++ b/_static/documentation_options.js
@@ -1,5 +1,5 @@
const DOCUMENTATION_OPTIONS = {
- VERSION: '0.0.0.post1+e86fc3c',
+ VERSION: '0.0.0.post1+ee53a22',
LANGUAGE: 'en',
COLLAPSE_INDEX: false,
BUILDER: 'html',
diff --git a/genindex.html b/genindex.html
index 288ac60b..0d148fe1 100644
--- a/genindex.html
+++ b/genindex.html
@@ -3,7 +3,7 @@
- Index — pydna 0.0.0.post1+e86fc3c documentation
+ Index — pydna 0.0.0.post1+ee53a22 documentation
@@ -14,7 +14,7 @@
-
+
diff --git a/index.html b/index.html
index 53d71a05..c93bc8a0 100644
--- a/index.html
+++ b/index.html
@@ -4,7 +4,7 @@
- Welcome to pydna’s documentation! — pydna 0.0.0.post1+e86fc3c documentation
+ Welcome to pydna’s documentation! — pydna 0.0.0.post1+ee53a22 documentation
@@ -15,7 +15,7 @@
-
+
diff --git a/py-modindex.html b/py-modindex.html
index 5553a59f..5a63362c 100644
--- a/py-modindex.html
+++ b/py-modindex.html
@@ -3,7 +3,7 @@
- Python Module Index — pydna 0.0.0.post1+e86fc3c documentation
+ Python Module Index — pydna 0.0.0.post1+ee53a22 documentation
@@ -14,7 +14,7 @@
-
+
diff --git a/search.html b/search.html
index 47c8bdb5..081c65ff 100644
--- a/search.html
+++ b/search.html
@@ -3,7 +3,7 @@
- Search — pydna 0.0.0.post1+e86fc3c documentation
+ Search — pydna 0.0.0.post1+ee53a22 documentation
@@ -15,7 +15,7 @@
-
+