From 5c9c72dd3ec388059aa106ec7e98aa26b776aa1c Mon Sep 17 00:00:00 2001
From: "dependabot[bot]" <49699333+dependabot[bot]@users.noreply.github.com>
Date: Mon, 6 Nov 2023 03:29:51 +0000
Subject: [PATCH 1/5] Bump pympipool from 0.7.1 to 0.7.2

Bumps [pympipool](https://github.com/jan-janssen/pympipool) from 0.7.1 to 0.7.2.
- [Release notes](https://github.com/jan-janssen/pympipool/releases)
- [Commits](https://github.com/jan-janssen/pympipool/compare/pympipool-0.7.1...pympipool-0.7.2)

---
updated-dependencies:
- dependency-name: pympipool
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
---
 setup.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/setup.py b/setup.py
index bd3af47..b88e84b 100644
--- a/setup.py
+++ b/setup.py
@@ -27,7 +27,7 @@
     keywords='lammps, mpi4py',
     packages=find_packages(exclude=["*tests*"]),
     install_requires=[
-        "mpi4py==3.1.5", "pympipool==0.7.1", "numpy==1.26.0"
+        "mpi4py==3.1.5", "pympipool==0.7.2", "numpy==1.26.0"
     ],
     extras_require={
         "ase": ["ase==3.22.1", "scipy==1.11.3"],

From 666e3b9c3dc610c316cac2469f7084e78729fc99 Mon Sep 17 00:00:00 2001
From: "github-actions[bot]"
 <41898282+github-actions[bot]@users.noreply.github.com>
Date: Mon, 6 Nov 2023 03:30:07 +0000
Subject: [PATCH 2/5] [dependabot skip] Update environment

---
 .ci_support/environment-mpich.yml   | 2 +-
 .ci_support/environment-openmpi.yml | 2 +-
 2 files changed, 2 insertions(+), 2 deletions(-)

diff --git a/.ci_support/environment-mpich.yml b/.ci_support/environment-mpich.yml
index a850622..2165737 100644
--- a/.ci_support/environment-mpich.yml
+++ b/.ci_support/environment-mpich.yml
@@ -6,6 +6,6 @@ dependencies:
   - mpich
   - numpy =1.26.0
   - mpi4py =3.1.5
-  - pympipool =0.7.1
+  - pympipool =0.7.2
   - ase =3.22.1
   - scipy =1.11.3
diff --git a/.ci_support/environment-openmpi.yml b/.ci_support/environment-openmpi.yml
index ccf6793..04f9387 100644
--- a/.ci_support/environment-openmpi.yml
+++ b/.ci_support/environment-openmpi.yml
@@ -6,6 +6,6 @@ dependencies:
   - openmpi
   - numpy =1.26.0
   - mpi4py =3.1.5
-  - pympipool =0.7.1
+  - pympipool =0.7.2
   - ase =3.22.1
   - scipy =1.11.3

From 46d4667d714ee3c6b88072bac66ba914778fef11 Mon Sep 17 00:00:00 2001
From: Jan Janssen <jan-janssen@users.noreply.github.com>
Date: Mon, 6 Nov 2023 07:56:43 +0100
Subject: [PATCH 3/5] Update concurrent.py

---
 pylammpsmpi/wrapper/concurrent.py | 2 --
 1 file changed, 2 deletions(-)

diff --git a/pylammpsmpi/wrapper/concurrent.py b/pylammpsmpi/wrapper/concurrent.py
index 576d096..1605169 100644
--- a/pylammpsmpi/wrapper/concurrent.py
+++ b/pylammpsmpi/wrapper/concurrent.py
@@ -43,8 +43,6 @@ def execute_async(
         connections=MpiExecInterface(
             cwd=cwd,
             cores=cores,
-            threads_per_core=1,
-            gpus_per_core=0,
             oversubscribe=oversubscribe,
         ),
     )

From 8dba40ebfe5c26ccc1d74497dd51067b7693f088 Mon Sep 17 00:00:00 2001
From: Jan Janssen <jan-janssen@users.noreply.github.com>
Date: Mon, 6 Nov 2023 07:57:13 +0100
Subject: [PATCH 4/5] Update unittests-mpich.yml

---
 .github/workflows/unittests-mpich.yml | 5 ++---
 1 file changed, 2 insertions(+), 3 deletions(-)

diff --git a/.github/workflows/unittests-mpich.yml b/.github/workflows/unittests-mpich.yml
index ce4a664..b622546 100644
--- a/.github/workflows/unittests-mpich.yml
+++ b/.github/workflows/unittests-mpich.yml
@@ -29,9 +29,8 @@ jobs:
         environment-file: .ci_support/environment-mpich.yml
     - name: Setup
       shell: bash -l {0}
-      run: |
-        pip install --no-deps .
+      run: pip install --no-deps .
     - name: Test
       shell: bash -l {0}
       timeout-minutes: 5
-      run: coverage run --omit pylammpsmpi/_version.py -m unittest discover tests
+      run: python -m unittest discover tests

From 3b717b0273bec6fcc45f2a9140d167c42afac249 Mon Sep 17 00:00:00 2001
From: Jan Janssen <jan-janssen@users.noreply.github.com>
Date: Mon, 6 Nov 2023 07:57:33 +0100
Subject: [PATCH 5/5] Update unittests-openmpi.yml

---
 .github/workflows/unittests-openmpi.yml | 5 ++---
 1 file changed, 2 insertions(+), 3 deletions(-)

diff --git a/.github/workflows/unittests-openmpi.yml b/.github/workflows/unittests-openmpi.yml
index 695d1b4..368ede8 100644
--- a/.github/workflows/unittests-openmpi.yml
+++ b/.github/workflows/unittests-openmpi.yml
@@ -29,9 +29,8 @@ jobs:
         environment-file: .ci_support/environment-openmpi.yml
     - name: Setup
       shell: bash -l {0}
-      run: |
-        pip install --no-deps .
+      run: pip install --no-deps .
     - name: Test
       shell: bash -l {0}
       timeout-minutes: 5
-      run: coverage run --omit pylammpsmpi/_version.py -m unittest discover tests
+      run: python -m unittest discover tests