From 082bf62330a5345f50af31d7533f7c620c4747bd Mon Sep 17 00:00:00 2001
From: olivroy <52606734+olivroy@users.noreply.github.com>
Date: Wed, 10 Jul 2024 08:24:46 -0400
Subject: [PATCH 01/26] Update _pkgdown.yml

---
 _pkgdown.yml | 1 -
 1 file changed, 1 deletion(-)

diff --git a/_pkgdown.yml b/_pkgdown.yml
index a8ce03928..6d062d5d5 100644
--- a/_pkgdown.yml
+++ b/_pkgdown.yml
@@ -71,7 +71,6 @@ navbar:
     - articles
     - tutorials
     - news
-    right: github
   components:
     options:
       text: Options

From 3f6aea2f4b4d38a71259f4f8e37c7baff7781ad8 Mon Sep 17 00:00:00 2001
From: krlmlr <krlmlr@users.noreply.github.com>
Date: Sun, 21 Jul 2024 01:53:52 +0000
Subject: [PATCH 02/26] Bump version to 1.9.0.9016

---
 DESCRIPTION | 2 +-
 NEWS.md     | 7 +++++++
 2 files changed, 8 insertions(+), 1 deletion(-)

diff --git a/DESCRIPTION b/DESCRIPTION
index ac5f0b66a..aae61883a 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -1,6 +1,6 @@
 Package: pillar
 Title: Coloured Formatting for Columns
-Version: 1.9.0.9015
+Version: 1.9.0.9016
 Authors@R: 
     c(person(given = "Kirill",
              family = "M\u00fcller",
diff --git a/NEWS.md b/NEWS.md
index ebf96b1ae..0fa305598 100644
--- a/NEWS.md
+++ b/NEWS.md
@@ -1,5 +1,12 @@
 <!-- NEWS.md is maintained by https://fledge.cynkra.com, contributors should not edit this file -->
 
+# pillar 1.9.0.9016
+
+## Documentation
+
+- Update \_pkgdown.yml to bring back search bar (@olivroy, #667).
+
+
 # pillar 1.9.0.9015
 
 ## Testing

From d6937c665254b51dd265c48c04b11d2ce0228588 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Kirill=20M=C3=BCller?= <kirill@cynkra.com>
Date: Thu, 1 Aug 2024 16:17:24 +0200
Subject: [PATCH 03/26] ci: Use dev roxygen2 and decor

---
 .github/workflows/R-CMD-check.yaml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/R-CMD-check.yaml b/.github/workflows/R-CMD-check.yaml
index baf5c5633..df777904f 100644
--- a/.github/workflows/R-CMD-check.yaml
+++ b/.github/workflows/R-CMD-check.yaml
@@ -51,7 +51,7 @@ jobs:
           install-r: false
           cache-version: rcc-smoke-2
           needs: check
-          extra-packages: any::rcmdcheck any::roxygen2 r-lib/styler
+          extra-packages: any::rcmdcheck r-lib/roxygen2 any::decor r-lib/styler
 
       - uses: ./.github/workflows/custom/after-install
         if: hashFiles('.github/workflows/custom/after-install/action.yml') != ''

From 94b4916d842f008c4d4a81397747f6014a1d8685 Mon Sep 17 00:00:00 2001
From: krlmlr <krlmlr@users.noreply.github.com>
Date: Thu, 1 Aug 2024 14:24:10 +0000
Subject: [PATCH 04/26] chore: Auto-update from GitHub Actions

Run: https://github.com/r-lib/pillar/actions/runs/10200114378
---
 DESCRIPTION | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/DESCRIPTION b/DESCRIPTION
index aae61883a..737b7989e 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -52,7 +52,7 @@ VignetteBuilder:
     knitr
 Encoding: UTF-8
 Roxygen: list(markdown = TRUE)
-RoxygenNote: 7.3.2
+RoxygenNote: 7.3.2.9000
 Config/testthat/edition: 3
 Config/testthat/parallel: true
 Config/testthat/start-first: 

From 40b7d2521b008c76feed2b9c1397bdded6b86383 Mon Sep 17 00:00:00 2001
From: krlmlr <krlmlr@users.noreply.github.com>
Date: Fri, 2 Aug 2024 01:45:43 +0000
Subject: [PATCH 05/26] Bump version to 1.9.0.9017

---
 DESCRIPTION |  2 +-
 NEWS.md     | 13 +++++++++++++
 2 files changed, 14 insertions(+), 1 deletion(-)

diff --git a/DESCRIPTION b/DESCRIPTION
index 737b7989e..08a7a43fc 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -1,6 +1,6 @@
 Package: pillar
 Title: Coloured Formatting for Columns
-Version: 1.9.0.9016
+Version: 1.9.0.9017
 Authors@R: 
     c(person(given = "Kirill",
              family = "M\u00fcller",
diff --git a/NEWS.md b/NEWS.md
index 0fa305598..a49db81a5 100644
--- a/NEWS.md
+++ b/NEWS.md
@@ -1,5 +1,18 @@
 <!-- NEWS.md is maintained by https://fledge.cynkra.com, contributors should not edit this file -->
 
+# pillar 1.9.0.9017
+
+## Chore
+
+- Auto-update from GitHub Actions.
+
+  Run: https://github.com/r-lib/pillar/actions/runs/10200114378
+
+## Continuous integration
+
+- Use dev roxygen2 and decor.
+
+
 # pillar 1.9.0.9016
 
 ## Documentation

From 6da81302e034504489402e0b8a0f9029cdcb36c8 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Kirill=20M=C3=BCller?= <kirill@cynkra.com>
Date: Fri, 2 Aug 2024 05:38:19 +0200
Subject: [PATCH 06/26] ci: Refactor dep-suggests-matrix, avoid killing base
 and recommended packages

---
 .github/dep-suggests-matrix.json              |  1 +
 .github/workflows/R-CMD-check.yaml            |  5 +-
 .../workflows/dep-matrix-suggests/action.yml  | 56 -------------------
 .../dep-suggests-matrix-read/action.yml       | 21 +++++++
 .../workflows/dep-suggests-matrix/action.R    | 42 ++++++++++++++
 .../workflows/dep-suggests-matrix/action.yml  | 13 +++++
 6 files changed, 81 insertions(+), 57 deletions(-)
 create mode 100644 .github/dep-suggests-matrix.json
 delete mode 100644 .github/workflows/dep-matrix-suggests/action.yml
 create mode 100644 .github/workflows/dep-suggests-matrix-read/action.yml
 create mode 100644 .github/workflows/dep-suggests-matrix/action.R
 create mode 100644 .github/workflows/dep-suggests-matrix/action.yml

diff --git a/.github/dep-suggests-matrix.json b/.github/dep-suggests-matrix.json
new file mode 100644
index 000000000..3cc98e25f
--- /dev/null
+++ b/.github/dep-suggests-matrix.json
@@ -0,0 +1 @@
+{"package":["bit64","DBI","debugme","DiagrammeR","dplyr","formattable","ggplot2","lubridate","nanotime","nycflights13","palmerpenguins","scales","stringi","units","vdiffr"]}
diff --git a/.github/workflows/R-CMD-check.yaml b/.github/workflows/R-CMD-check.yaml
index df777904f..c0966d1f2 100644
--- a/.github/workflows/R-CMD-check.yaml
+++ b/.github/workflows/R-CMD-check.yaml
@@ -59,6 +59,9 @@ jobs:
       - uses: ./.github/workflows/versions-matrix
         if: github.event_name != 'pull_request' || github.event.pull_request.head.repo.full_name == github.repository
 
+      - uses: ./.github/workflows/dep-suggests-matrix
+        if: github.event_name != 'pull_request' || github.event.pull_request.head.repo.full_name == github.repository
+
       - uses: ./.github/workflows/update-snapshots
         if: github.event_name != 'pull_request' || github.event.pull_request.head.repo.full_name == github.repository
 
@@ -212,7 +215,7 @@ jobs:
           use-public-rspm: true
 
       - id: set-matrix
-        uses: ./.github/workflows/dep-matrix-suggests
+        uses: ./.github/workflows/dep-suggests-matrix-read
 
   check-suggests-matrix:
     runs-on: ubuntu-22.04
diff --git a/.github/workflows/dep-matrix-suggests/action.yml b/.github/workflows/dep-matrix-suggests/action.yml
deleted file mode 100644
index deafab932..000000000
--- a/.github/workflows/dep-matrix-suggests/action.yml
+++ /dev/null
@@ -1,56 +0,0 @@
-name: "Actions to compute a matrix with all suggested packages"
-outputs:
-  matrix:
-    description: "Generated matrix"
-    value: ${{ steps.set-matrix.outputs.matrix }}
-
-runs:
-  using: "composite"
-  steps:
-    - id: set-matrix
-      run: |
-        get_deps <- function() {
-          # Determine package dependencies
-          if (!requireNamespace("desc", quietly = TRUE)) {
-            install.packages("desc")
-          }
-
-          deps_df <- desc::desc_get_deps()
-          deps_df_optional <- deps_df$package[deps_df$type %in% c("Suggests", "Enhances")]
-          deps_df_hard <- deps_df$package[deps_df$type %in% c("Depends", "Imports", "LinkingTo")]
-
-          packages <- sort(deps_df_optional)
-          packages <- intersect(packages, rownames(available.packages()))
-
-          # Too big to fail, or can't be avoided:
-          off_limits <- c("testthat", "rmarkdown", "rcmdcheck", deps_df_hard)
-          off_limits_dep <- unlist(tools::package_dependencies(off_limits, recursive = TRUE, which = "strong"))
-          setdiff(packages, c(off_limits, off_limits_dep))
-        }
-
-        if (Sys.getenv("GITHUB_BASE_REF") != "") {
-          print(Sys.getenv("GITHUB_BASE_REF"))
-          has_diff <- (system("git diff ${{ github.event.pull_request.base.sha }}... | egrep '^[+][^+]' | grep -q ::") == 0)
-          if (has_diff) {
-            system("git diff ${{ github.event.pull_request.base.sha }}... | egrep '^[+][^+]' | grep -q ::")
-            packages <- get_deps()
-          } else {
-            writeLines("No changes using :: found, not checking without suggested packages")
-            packages <- character()
-          }
-        } else {
-          packages <- get_deps()
-        }
-
-        if (length(packages) > 0) {
-          json <- paste0(
-            '{"package":[',
-            paste0('"', packages, '"', collapse = ","),
-            ']}'
-          )
-          writeLines(json)
-          writeLines(paste0("matrix=", json), Sys.getenv("GITHUB_OUTPUT"))
-        } else {
-          writeLines("Package list empty!")
-        }
-      shell: Rscript {0}
diff --git a/.github/workflows/dep-suggests-matrix-read/action.yml b/.github/workflows/dep-suggests-matrix-read/action.yml
new file mode 100644
index 000000000..b1a8ed0d3
--- /dev/null
+++ b/.github/workflows/dep-suggests-matrix-read/action.yml
@@ -0,0 +1,21 @@
+name: "Actions to read a matrix with all suggested packages, computed with the dep-suggests-matrix action"
+outputs:
+  matrix:
+    description: "Generated matrix"
+    value: ${{ steps.set-matrix.outputs.matrix }}
+
+runs:
+  using: "composite"
+  steps:
+    - name: Install json2yaml
+      run: |
+        sudo npm install -g json2yaml
+      shell: bash
+
+    - id: set-matrix
+      run: |
+        matrix=$(cat .github/dep-suggests-matrix.json || echo '{"package":[]}')
+        echo $matrix | jq .
+        echo $matrix | json2yaml
+        echo "matrix=$matrix" | tee -a $GITHUB_OUTPUT
+      shell: bash
diff --git a/.github/workflows/dep-suggests-matrix/action.R b/.github/workflows/dep-suggests-matrix/action.R
new file mode 100644
index 000000000..c6a08a5b0
--- /dev/null
+++ b/.github/workflows/dep-suggests-matrix/action.R
@@ -0,0 +1,42 @@
+# FIXME: Dynamic lookup by parsing https://svn.r-project.org/R/tags/
+get_deps <- function() {
+  # Determine package dependencies
+  if (!requireNamespace("desc", quietly = TRUE)) {
+    install.packages("desc")
+  }
+
+  deps_df <- desc::desc_get_deps()
+  deps_df_optional <- deps_df$package[deps_df$type %in% c("Suggests", "Enhances")]
+  deps_df_hard <- deps_df$package[deps_df$type %in% c("Depends", "Imports", "LinkingTo")]
+  deps_df_base <- unlist(tools::standard_package_names(), use.names = FALSE)
+
+  packages <- sort(deps_df_optional)
+  packages <- intersect(packages, rownames(available.packages()))
+
+  # Too big to fail, or can't be avoided:
+  off_limits <- c("testthat", "rmarkdown", "rcmdcheck", deps_df_hard, deps_df_base)
+  off_limits_dep <- unlist(tools::package_dependencies(off_limits, recursive = TRUE, which = "strong"))
+  setdiff(packages, c(off_limits, off_limits_dep))
+}
+
+if (Sys.getenv("GITHUB_BASE_REF") != "") {
+  print(Sys.getenv("GITHUB_BASE_REF"))
+  has_diff <- (system("git diff ${{ github.event.pull_request.base.sha }}... | egrep '^[+][^+]' | grep -q ::") == 0)
+  if (has_diff) {
+    system("git diff ${{ github.event.pull_request.base.sha }}... | egrep '^[+][^+]' | grep -q ::")
+    packages <- get_deps()
+  } else {
+    writeLines("No changes using :: found, not checking without suggested packages")
+    packages <- character()
+  }
+} else {
+  packages <- get_deps()
+}
+
+json <- paste0(
+  '{"package":[',
+  if (length(packages) > 0) paste0('"', packages, '"', collapse = ","),
+  ']}'
+)
+writeLines(json, ".github/dep-suggests-matrix.json")
+writeLines(json)
diff --git a/.github/workflows/dep-suggests-matrix/action.yml b/.github/workflows/dep-suggests-matrix/action.yml
new file mode 100644
index 000000000..0f5e64951
--- /dev/null
+++ b/.github/workflows/dep-suggests-matrix/action.yml
@@ -0,0 +1,13 @@
+name: "Actions to compute a matrix with all suggested packages"
+outputs:
+  matrix:
+    description: "Generated matrix"
+    value: ${{ steps.set-matrix.outputs.matrix }}
+
+runs:
+  using: "composite"
+  steps:
+    - id: set-matrix
+      run: |
+        Rscript ./.github/workflows/dep-suggests-matrix/action.R
+      shell: bash

From f18ae94ac2c63d8375608dc2d25b6e337b12a4e0 Mon Sep 17 00:00:00 2001
From: krlmlr <krlmlr@users.noreply.github.com>
Date: Sat, 3 Aug 2024 01:40:25 +0000
Subject: [PATCH 07/26] chore: Auto-update from GitHub Actions

Run: https://github.com/r-lib/pillar/actions/runs/10224241696
---
 man/ctl_new_pillar.Rd      | 2 +-
 man/ctl_new_pillar_list.Rd | 2 +-
 man/glimpse.Rd             | 2 +-
 man/tbl_format_body.Rd     | 2 +-
 man/tbl_format_footer.Rd   | 2 +-
 man/tbl_format_header.Rd   | 2 +-
 man/tbl_format_setup.Rd    | 2 +-
 7 files changed, 7 insertions(+), 7 deletions(-)

diff --git a/man/ctl_new_pillar.Rd b/man/ctl_new_pillar.Rd
index c80660971..f4c27d33b 100644
--- a/man/ctl_new_pillar.Rd
+++ b/man/ctl_new_pillar.Rd
@@ -49,7 +49,7 @@ Implementations should return \code{NULL} if none of the data
 fits the available width.
 }
 \examples{
-\dontshow{if (rlang::is_installed("palmerpenguins") && requireNamespace("tibble")) (if (getRversion() >= "3.4") withAutoprint else force)(\{ # examplesIf}
+\dontshow{if (rlang::is_installed("palmerpenguins") && requireNamespace("tibble")) withAutoprint(\{ # examplesIf}
 # Create pillar objects
 ctl_new_pillar(
   palmerpenguins::penguins,
diff --git a/man/ctl_new_pillar_list.Rd b/man/ctl_new_pillar_list.Rd
index e7464f088..bfa947db3 100644
--- a/man/ctl_new_pillar_list.Rd
+++ b/man/ctl_new_pillar_list.Rd
@@ -65,7 +65,7 @@ and with \code{first_pillar} set to the pillar object constructed in the
 first call.
 }
 \examples{
-\dontshow{if (rlang::is_installed("palmerpenguins") && requireNamespace("tibble")) (if (getRversion() >= "3.4") withAutoprint else force)(\{ # examplesIf}
+\dontshow{if (rlang::is_installed("palmerpenguins") && requireNamespace("tibble")) withAutoprint(\{ # examplesIf}
 # Simple column
 ctl_new_pillar_list(
   tibble::tibble(),
diff --git a/man/glimpse.Rd b/man/glimpse.Rd
index e5f306f11..0cce4e27c 100644
--- a/man/glimpse.Rd
+++ b/man/glimpse.Rd
@@ -39,7 +39,7 @@ See \code{\link[=format_glimpse]{format_glimpse()}} for details on the formattin
 \examples{
 glimpse(mtcars)
 
-\dontshow{if (rlang::is_installed("nycflights13")) (if (getRversion() >= "3.4") withAutoprint else force)(\{ # examplesIf}
+\dontshow{if (rlang::is_installed("nycflights13")) withAutoprint(\{ # examplesIf}
 glimpse(nycflights13::flights)
 \dontshow{\}) # examplesIf}
 }
diff --git a/man/tbl_format_body.Rd b/man/tbl_format_body.Rd
index 46b0a58ea..c5f890482 100644
--- a/man/tbl_format_body.Rd
+++ b/man/tbl_format_body.Rd
@@ -30,7 +30,7 @@ If you only need to change the appearance of a single data type,
 override \code{\link[vctrs:vec_ptype_full]{vctrs::vec_ptype_abbr()}} and \code{\link[=pillar_shaft]{pillar_shaft()}} for this data type.
 }
 \examples{
-\dontshow{if (rlang::is_installed("palmerpenguins")) (if (getRversion() >= "3.4") withAutoprint else force)(\{ # examplesIf}
+\dontshow{if (rlang::is_installed("palmerpenguins")) withAutoprint(\{ # examplesIf}
 setup <- tbl_format_setup(palmerpenguins::penguins)
 tbl_format_body(palmerpenguins::penguins, setup)
 
diff --git a/man/tbl_format_footer.Rd b/man/tbl_format_footer.Rd
index d2230e4fe..51d1e9263 100644
--- a/man/tbl_format_footer.Rd
+++ b/man/tbl_format_footer.Rd
@@ -30,7 +30,7 @@ The default implementation adds information about rows and columns
 that are not shown in the body.
 }
 \examples{
-\dontshow{if (rlang::is_installed("palmerpenguins")) (if (getRversion() >= "3.4") withAutoprint else force)(\{ # examplesIf}
+\dontshow{if (rlang::is_installed("palmerpenguins")) withAutoprint(\{ # examplesIf}
 setup <- tbl_format_setup(palmerpenguins::penguins)
 tbl_format_footer(palmerpenguins::penguins, setup)
 
diff --git a/man/tbl_format_header.Rd b/man/tbl_format_header.Rd
index 0d980c730..43fcf2b19 100644
--- a/man/tbl_format_header.Rd
+++ b/man/tbl_format_header.Rd
@@ -31,7 +31,7 @@ override or extend \code{\link[=tbl_sum]{tbl_sum()}} for your class which is cal
 default method.
 }
 \examples{
-\dontshow{if (rlang::is_installed("palmerpenguins")) (if (getRversion() >= "3.4") withAutoprint else force)(\{ # examplesIf}
+\dontshow{if (rlang::is_installed("palmerpenguins")) withAutoprint(\{ # examplesIf}
 setup <- tbl_format_setup(palmerpenguins::penguins)
 tbl_format_header(palmerpenguins::penguins, setup)
 
diff --git a/man/tbl_format_setup.Rd b/man/tbl_format_setup.Rd
index cd73667ed..2af0f4f3b 100644
--- a/man/tbl_format_setup.Rd
+++ b/man/tbl_format_setup.Rd
@@ -86,7 +86,7 @@ standard printing for tibbles.
 See \code{\link[=new_tbl_format_setup]{new_tbl_format_setup()}} for details on the returned object.
 }
 \examples{
-\dontshow{if (rlang::is_installed("palmerpenguins")) (if (getRversion() >= "3.4") withAutoprint else force)(\{ # examplesIf}
+\dontshow{if (rlang::is_installed("palmerpenguins")) withAutoprint(\{ # examplesIf}
 tbl_format_setup(palmerpenguins::penguins)
 \dontshow{\}) # examplesIf}
 }

From e6f75b17dd57d9ba200065ab07fcf33f1c926584 Mon Sep 17 00:00:00 2001
From: krlmlr <krlmlr@users.noreply.github.com>
Date: Sat, 3 Aug 2024 01:47:47 +0000
Subject: [PATCH 08/26] Bump version to 1.9.0.9018

---
 DESCRIPTION |  2 +-
 NEWS.md     | 13 +++++++++++++
 2 files changed, 14 insertions(+), 1 deletion(-)

diff --git a/DESCRIPTION b/DESCRIPTION
index 08a7a43fc..cafe75d47 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -1,6 +1,6 @@
 Package: pillar
 Title: Coloured Formatting for Columns
-Version: 1.9.0.9017
+Version: 1.9.0.9018
 Authors@R: 
     c(person(given = "Kirill",
              family = "M\u00fcller",
diff --git a/NEWS.md b/NEWS.md
index a49db81a5..19f3c73a2 100644
--- a/NEWS.md
+++ b/NEWS.md
@@ -1,5 +1,18 @@
 <!-- NEWS.md is maintained by https://fledge.cynkra.com, contributors should not edit this file -->
 
+# pillar 1.9.0.9018
+
+## Chore
+
+- Auto-update from GitHub Actions.
+
+  Run: https://github.com/r-lib/pillar/actions/runs/10224241696
+
+## Continuous integration
+
+- Refactor dep-suggests-matrix, avoid killing base and recommended packages.
+
+
 # pillar 1.9.0.9017
 
 ## Chore

From 6f4b526ff0674dac1a8fdef8c369931f63443955 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Kirill=20M=C3=BCller?= <kirill@cynkra.com>
Date: Mon, 5 Aug 2024 22:42:43 +0200
Subject: [PATCH 09/26] ci: Inline action

---
 .github/workflows/get-extra/action.yml | 16 ----------------
 .github/workflows/install/action.yml   |  6 +++++-
 2 files changed, 5 insertions(+), 17 deletions(-)
 delete mode 100644 .github/workflows/get-extra/action.yml

diff --git a/.github/workflows/get-extra/action.yml b/.github/workflows/get-extra/action.yml
deleted file mode 100644
index 84c56d9b7..000000000
--- a/.github/workflows/get-extra/action.yml
+++ /dev/null
@@ -1,16 +0,0 @@
-name: "Action to determine extra packages to be installed"
-outputs:
-  packages:
-    description: "List of extra packages"
-    value: ${{ steps.get-extra.outputs.packages }}
-
-runs:
-  using: "composite"
-  steps:
-    - name: Get extra packages
-      id: get-extra
-      run: |
-        set -x
-        packages=$( ( grep Config/gha/extra-packages DESCRIPTION || true ) | cut -d " " -f 2)
-        echo packages=$packages >> $GITHUB_OUTPUT
-      shell: bash
diff --git a/.github/workflows/install/action.yml b/.github/workflows/install/action.yml
index cf9eda067..702aedabd 100644
--- a/.github/workflows/install/action.yml
+++ b/.github/workflows/install/action.yml
@@ -82,7 +82,11 @@ runs:
         use-public-rspm: true
 
     - id: get-extra
-      uses: ./.github/workflows/get-extra
+      run: |
+        set -x
+        packages=$( ( grep Config/gha/extra-packages DESCRIPTION || true ) | cut -d " " -f 2)
+        echo packages=$packages >> $GITHUB_OUTPUT
+      shell: bash
 
     - uses: r-lib/actions/setup-r-dependencies@v2
       env:

From 0a6c53ecb3736c96ec03d4c396c90a8d76a29cd1 Mon Sep 17 00:00:00 2001
From: krlmlr <krlmlr@users.noreply.github.com>
Date: Tue, 6 Aug 2024 01:45:48 +0000
Subject: [PATCH 10/26] Bump version to 1.9.0.9019

---
 DESCRIPTION | 2 +-
 NEWS.md     | 7 +++++++
 2 files changed, 8 insertions(+), 1 deletion(-)

diff --git a/DESCRIPTION b/DESCRIPTION
index cafe75d47..6b7dcb1c4 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -1,6 +1,6 @@
 Package: pillar
 Title: Coloured Formatting for Columns
-Version: 1.9.0.9018
+Version: 1.9.0.9019
 Authors@R: 
     c(person(given = "Kirill",
              family = "M\u00fcller",
diff --git a/NEWS.md b/NEWS.md
index 19f3c73a2..871aeae11 100644
--- a/NEWS.md
+++ b/NEWS.md
@@ -1,5 +1,12 @@
 <!-- NEWS.md is maintained by https://fledge.cynkra.com, contributors should not edit this file -->
 
+# pillar 1.9.0.9019
+
+## Continuous integration
+
+- Inline action.
+
+
 # pillar 1.9.0.9018
 
 ## Chore

From 6d4c3c7cfe98991cbaf300b10858181dfff2be7b Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Kirill=20M=C3=BCller?= <kirill@cynkra.com>
Date: Sat, 10 Aug 2024 00:48:20 +0200
Subject: [PATCH 11/26] ci: Use v2 instead of master

---
 .github/workflows/R-CMD-check.yaml |  2 +-
 .github/workflows/pkgdown.yaml     |  2 +-
 .github/workflows/pr-commands.yaml | 12 ++++++------
 3 files changed, 8 insertions(+), 8 deletions(-)

diff --git a/.github/workflows/R-CMD-check.yaml b/.github/workflows/R-CMD-check.yaml
index c0966d1f2..172026f43 100644
--- a/.github/workflows/R-CMD-check.yaml
+++ b/.github/workflows/R-CMD-check.yaml
@@ -1,4 +1,4 @@
-# Workflow derived from https://github.com/r-lib/actions/tree/master/examples
+# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
 # Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
 #
 # NOTE: This workflow is overkill for most R packages and
diff --git a/.github/workflows/pkgdown.yaml b/.github/workflows/pkgdown.yaml
index 740004087..de69b1494 100644
--- a/.github/workflows/pkgdown.yaml
+++ b/.github/workflows/pkgdown.yaml
@@ -1,4 +1,4 @@
-# Workflow derived from https://github.com/r-lib/actions/tree/master/examples
+# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
 # Also included in R-CMD-check.yaml, this workflow only listens to pushes to branches
 # that start with "docs*"
 on:
diff --git a/.github/workflows/pr-commands.yaml b/.github/workflows/pr-commands.yaml
index 3ce95aaf2..a11f4d390 100644
--- a/.github/workflows/pr-commands.yaml
+++ b/.github/workflows/pr-commands.yaml
@@ -12,10 +12,10 @@ jobs:
       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
     steps:
       - uses: actions/checkout@v4
-      - uses: r-lib/actions/pr-fetch@master
+      - uses: r-lib/actions/pr-fetch@v2
         with:
           repo-token: ${{ secrets.GITHUB_TOKEN }}
-      - uses: r-lib/actions/setup-r@master
+      - uses: r-lib/actions/setup-r@v2
         with:
           install-r: false
       - name: Configure Git identity
@@ -39,7 +39,7 @@ jobs:
             git add man/ NAMESPACE
             git commit -m 'Document'
           fi
-      - uses: r-lib/actions/pr-push@master
+      - uses: r-lib/actions/pr-push@v2
         with:
           repo-token: ${{ secrets.GITHUB_TOKEN }}
   style:
@@ -51,10 +51,10 @@ jobs:
       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
     steps:
       - uses: actions/checkout@v4
-      - uses: r-lib/actions/pr-fetch@master
+      - uses: r-lib/actions/pr-fetch@v2
         with:
           repo-token: ${{ secrets.GITHUB_TOKEN }}
-      - uses: r-lib/actions/setup-r@master
+      - uses: r-lib/actions/setup-r@v2
         with:
           install-r: false
       - name: Configure Git identity
@@ -77,7 +77,7 @@ jobs:
             git add '*.R' '*.Rmd'
             git commit -m 'Style'
           fi
-      - uses: r-lib/actions/pr-push@master
+      - uses: r-lib/actions/pr-push@v2
         with:
           repo-token: ${{ secrets.GITHUB_TOKEN }}
   merge:

From 92ef8012de8ee1438348076847e9587401917d62 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Kirill=20M=C3=BCller?= <kirill@cynkra.com>
Date: Sat, 10 Aug 2024 03:06:57 +0200
Subject: [PATCH 12/26] ci: Fix edge case of no suggested packages

---
 .../workflows/dep-suggests-matrix-read/action.yml |  9 ++++++---
 .github/workflows/dep-suggests-matrix/action.R    | 15 ++++++++++-----
 2 files changed, 16 insertions(+), 8 deletions(-)

diff --git a/.github/workflows/dep-suggests-matrix-read/action.yml b/.github/workflows/dep-suggests-matrix-read/action.yml
index b1a8ed0d3..39e7a7b23 100644
--- a/.github/workflows/dep-suggests-matrix-read/action.yml
+++ b/.github/workflows/dep-suggests-matrix-read/action.yml
@@ -14,8 +14,11 @@ runs:
 
     - id: set-matrix
       run: |
-        matrix=$(cat .github/dep-suggests-matrix.json || echo '{"package":[]}')
-        echo $matrix | jq .
-        echo $matrix | json2yaml
+        # Empty contents if no suggested packages
+        matrix=$(cat .github/dep-suggests-matrix.json || true)
+        if [ -n "$matrix" ]; then
+          echo $matrix | jq .
+          echo $matrix | json2yaml
+        fi
         echo "matrix=$matrix" | tee -a $GITHUB_OUTPUT
       shell: bash
diff --git a/.github/workflows/dep-suggests-matrix/action.R b/.github/workflows/dep-suggests-matrix/action.R
index c6a08a5b0..139519403 100644
--- a/.github/workflows/dep-suggests-matrix/action.R
+++ b/.github/workflows/dep-suggests-matrix/action.R
@@ -33,10 +33,15 @@ if (Sys.getenv("GITHUB_BASE_REF") != "") {
   packages <- get_deps()
 }
 
-json <- paste0(
-  '{"package":[',
-  if (length(packages) > 0) paste0('"', packages, '"', collapse = ","),
-  ']}'
-)
+if (length(packages) > 0) {
+  json <- paste0(
+    '{"package":[',
+    paste0('"', packages, '"', collapse = ","),
+    ']}'
+  )
+} else {
+  json <- character()
+}
+
 writeLines(json, ".github/dep-suggests-matrix.json")
 writeLines(json)

From d72651cb925a6c683050632702734e94b94ce530 Mon Sep 17 00:00:00 2001
From: krlmlr <krlmlr@users.noreply.github.com>
Date: Sat, 10 Aug 2024 01:48:27 +0000
Subject: [PATCH 13/26] Bump version to 1.9.0.9020

---
 DESCRIPTION | 2 +-
 NEWS.md     | 9 +++++++++
 2 files changed, 10 insertions(+), 1 deletion(-)

diff --git a/DESCRIPTION b/DESCRIPTION
index 6b7dcb1c4..c043f93b6 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -1,6 +1,6 @@
 Package: pillar
 Title: Coloured Formatting for Columns
-Version: 1.9.0.9019
+Version: 1.9.0.9020
 Authors@R: 
     c(person(given = "Kirill",
              family = "M\u00fcller",
diff --git a/NEWS.md b/NEWS.md
index 871aeae11..7cc8b370c 100644
--- a/NEWS.md
+++ b/NEWS.md
@@ -1,5 +1,14 @@
 <!-- NEWS.md is maintained by https://fledge.cynkra.com, contributors should not edit this file -->
 
+# pillar 1.9.0.9020
+
+## Continuous integration
+
+- Fix edge case of no suggested packages.
+
+- Use v2 instead of master.
+
+
 # pillar 1.9.0.9019
 
 ## Continuous integration

From cb6f2cfc29293771b91d07db8c0289a853138292 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Kirill=20M=C3=BCller?= <kirill@cynkra.com>
Date: Fri, 16 Aug 2024 21:50:12 +0200
Subject: [PATCH 14/26] ci: Sync with latest developments

---
 .github/workflows/R-CMD-check-dev.yaml     |  4 +-
 .github/workflows/R-CMD-check.yaml         | 17 +++++++-
 .github/workflows/commit/action.yml        | 50 +++++++++++++++++-----
 .github/workflows/revdep.yaml              |  2 +-
 .github/workflows/update-status/action.yml | 19 +++++---
 5 files changed, 69 insertions(+), 23 deletions(-)

diff --git a/.github/workflows/R-CMD-check-dev.yaml b/.github/workflows/R-CMD-check-dev.yaml
index 9b00903cf..700486fc2 100644
--- a/.github/workflows/R-CMD-check-dev.yaml
+++ b/.github/workflows/R-CMD-check-dev.yaml
@@ -101,7 +101,7 @@ jobs:
 
     runs-on: ubuntu-22.04
 
-    name: ${{ matrix.package }}
+    name: 'rcc-dev: ${{ matrix.package }}'
 
     # Begin custom: services
     # End custom: services
@@ -147,4 +147,4 @@ jobs:
 
       - uses: ./.github/workflows/check
         with:
-          results: ${{ matrix.package }}
\ No newline at end of file
+          results: ${{ matrix.package }}
diff --git a/.github/workflows/R-CMD-check.yaml b/.github/workflows/R-CMD-check.yaml
index 172026f43..5c685f598 100644
--- a/.github/workflows/R-CMD-check.yaml
+++ b/.github/workflows/R-CMD-check.yaml
@@ -13,11 +13,20 @@ on:
     branches:
       - main
       - master
+  workflow_dispatch:
+    inputs:
+      ref:
+        description: "Branch or tag to check out"
+        required: false
+        default: "main"
+  merge_group:
+    types:
+      - checks_requested
   schedule:
     - cron: "10 0 * * *"
 
 concurrency:
-  group: ${{ github.workflow }}-${{ github.ref }}-${{ github.head_ref || github.sha }}-${{ github.base_ref || '' }}
+  group: ${{ github.workflow }}-${{ github.ref }}-${{ inputs.ref || github.head_ref || github.sha }}-${{ github.base_ref || '' }}
   cancel-in-progress: true
 
 name: rcc
@@ -35,6 +44,8 @@ jobs:
 
     steps:
       - uses: actions/checkout@v4
+        with:
+          ref: ${{ inputs.ref }}
 
       - uses: ./.github/workflows/rate-limit
         with:
@@ -74,6 +85,8 @@ jobs:
       - id: commit
         if: github.event_name != 'pull_request' || github.event.pull_request.head.repo.full_name == github.repository
         uses: ./.github/workflows/commit
+        with:
+          token: ${{ secrets.GITHUB_TOKEN }}
 
       - uses: ./.github/workflows/check
         with:
@@ -154,7 +167,7 @@ jobs:
 
     runs-on: ${{ matrix.os }}
 
-    name: ${{ matrix.os }} (${{ matrix.r }}) ${{ matrix.desc }}
+    name: 'rcc: ${{ matrix.os }} (${{ matrix.r }}) ${{ matrix.desc }}'
 
     # Begin custom: services
     # End custom: services
diff --git a/.github/workflows/commit/action.yml b/.github/workflows/commit/action.yml
index bd375d3dd..d5049bc56 100644
--- a/.github/workflows/commit/action.yml
+++ b/.github/workflows/commit/action.yml
@@ -1,4 +1,8 @@
 name: "Action to commit changes to the repository"
+inputs:
+  token:
+    description: "GitHub token"
+    required: true
 outputs:
   sha:
     description: "SHA of generated commit"
@@ -7,23 +11,47 @@ outputs:
 runs:
   using: "composite"
   steps:
-    - name: Commit if changed
+    - name: Commit if changed, create a PR if protected
       id: commit
+      env:
+        GITHUB_TOKEN: ${{ inputs.token }}
       run: |
         set -x
         if [ -n "$(git status --porcelain)" ]; then
           echo "Changed"
-          git fetch
-          if [ -n "${GITHUB_HEAD_REF}" ]; then
+          protected=${{ github.ref_protected }}
+          if [ "${protected}" = "true" ]; then
+            current_branch=$(git branch --show-current)
+            new_branch=gha-commit
+            git checkout -b ${new_branch}
             git add .
-            git stash save
-            git switch ${GITHUB_HEAD_REF}
-            git merge origin/${GITHUB_BASE_REF} --no-edit
-            git stash pop
+            git commit -m "chore: Auto-update from GitHub Actions"$'\n'$'\n'"Run: ${GITHUB_SERVER_URL}/${GITHUB_REPOSITORY}/actions/runs/${GITHUB_RUN_ID}"
+            # Force-push, used in only one place
+            # Alternative: separate branch names for each usage
+            git push -u origin HEAD -f
+
+            existing_pr=$(gh pr list --state open --base main --head ${new_branch} --json number --jq '.[] | .number')
+            if [ -n "${existing_pr}" ]; then
+              echo "Existing PR: ${existing_pr}"
+            else
+              gh pr create --base main --head ${new_branch} --title "chore: Auto-update from GitHub Actions" --body "Run: ${GITHUB_SERVER_URL}/${GITHUB_REPOSITORY}/actions/runs/${GITHUB_RUN_ID}"
+            fi
+
+            gh workflow run rcc -f ref=$(git rev-parse HEAD)
+          else
+            git fetch
+            if [ -n "${GITHUB_HEAD_REF}" ]; then
+              git add .
+              git stash save
+              git switch ${GITHUB_HEAD_REF}
+              git merge origin/${GITHUB_BASE_REF} --no-edit
+              git stash pop
+            fi
+            git add .
+            git commit -m "chore: Auto-update from GitHub Actions"$'\n'$'\n'"Run: ${GITHUB_SERVER_URL}/${GITHUB_REPOSITORY}/actions/runs/${GITHUB_RUN_ID}"
+            git push -u origin HEAD
           fi
-          git add .
-          git commit -m "chore: Auto-update from GitHub Actions"$'\n'$'\n'"Run: ${GITHUB_SERVER_URL}/${GITHUB_REPOSITORY}/actions/runs/${GITHUB_RUN_ID}"
-          git push -u origin HEAD
-          echo sha=$(git rev-parse HEAD) >> $GITHUB_OUTPUT
         fi
+        # Unconditionally set the output because it could come from a manually triggered run
+        echo sha=$(git rev-parse HEAD) >> $GITHUB_OUTPUT
       shell: bash
diff --git a/.github/workflows/revdep.yaml b/.github/workflows/revdep.yaml
index 4a0d511ae..0fa67dce8 100644
--- a/.github/workflows/revdep.yaml
+++ b/.github/workflows/revdep.yaml
@@ -67,7 +67,7 @@ jobs:
 
     runs-on: ubuntu-22.04
 
-    name: ${{ matrix.package }}
+    name: 'revdep: ${{ matrix.package }}'
 
     # Begin custom: services
     # End custom: services
diff --git a/.github/workflows/update-status/action.yml b/.github/workflows/update-status/action.yml
index 881217088..d9462fce3 100644
--- a/.github/workflows/update-status/action.yml
+++ b/.github/workflows/update-status/action.yml
@@ -4,9 +4,6 @@ inputs:
   sha:
     description: 'SHA to update'
     required: true
-  state:
-    description: 'state to update'
-    required: true
 
 runs:
   using: "composite"
@@ -24,11 +21,19 @@ runs:
             -H "X-GitHub-Api-Version: 2022-11-28" \
             repos/${{ github.repository }}/actions/runs/${{ github.run_id }} | jq -r .html_url)
 
-          gh api \
-            --method POST \
+          # Check if a failing status has been set already
+          status=$(gh api \
             -H "Accept: application/vnd.github+json" \
             -H "X-GitHub-Api-Version: 2022-11-28" \
-            repos/${{ github.repository }}/statuses/${{ inputs.sha }} \
-            -f "state=${{ job.status }}" -f "target_url=$html_url" -f "description=${{ github.workflow }} / ${{ github.job }}" -f "context=actions-sync"
+            repos/${{ github.repository }}/commits/${{ inputs.sha }}/status | jq -r .state)
+
+          if [ "${status}" != "error" ] && [ "${status}" != "failure" ]; then
+            gh api \
+              --method POST \
+              -H "Accept: application/vnd.github+json" \
+              -H "X-GitHub-Api-Version: 2022-11-28" \
+              repos/${{ github.repository }}/statuses/${{ inputs.sha }} \
+              -f "state=${{ job.status }}" -f "target_url=$html_url" -f "description=${{ github.workflow }} / ${{ github.job }}" -f "context=actions-sync"
+          fi
         fi
       shell: bash

From 2ca3e32a897f9de8b3d9a86ef02531b2cd193827 Mon Sep 17 00:00:00 2001
From: krlmlr <krlmlr@users.noreply.github.com>
Date: Sat, 17 Aug 2024 01:47:30 +0000
Subject: [PATCH 15/26] Bump version to 1.9.0.9021

---
 DESCRIPTION | 2 +-
 NEWS.md     | 7 +++++++
 2 files changed, 8 insertions(+), 1 deletion(-)

diff --git a/DESCRIPTION b/DESCRIPTION
index c043f93b6..07da370f8 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -1,6 +1,6 @@
 Package: pillar
 Title: Coloured Formatting for Columns
-Version: 1.9.0.9020
+Version: 1.9.0.9021
 Authors@R: 
     c(person(given = "Kirill",
              family = "M\u00fcller",
diff --git a/NEWS.md b/NEWS.md
index 7cc8b370c..6ff34aabd 100644
--- a/NEWS.md
+++ b/NEWS.md
@@ -1,5 +1,12 @@
 <!-- NEWS.md is maintained by https://fledge.cynkra.com, contributors should not edit this file -->
 
+# pillar 1.9.0.9021
+
+## Continuous integration
+
+- Sync with latest developments.
+
+
 # pillar 1.9.0.9020
 
 ## Continuous integration

From 81fe0eb684aa96eda1fbd9901f7a3f303ca7f4c2 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Kirill=20M=C3=BCller?= <kirill@cynkra.com>
Date: Thu, 29 Aug 2024 21:28:09 +0200
Subject: [PATCH 16/26] ci: Improve support for protected branches, without
 fledge

---
 .github/workflows/R-CMD-check-status.yaml     |  76 +++++++++
 .github/workflows/R-CMD-check.yaml            | 161 +++++-------------
 .github/workflows/commit/action.yml           |  14 +-
 .../dep-suggests-matrix-read/action.yml       |  24 ---
 .../workflows/dep-suggests-matrix/action.R    |  14 +-
 .github/workflows/get-extra/action.yml        |  16 ++
 .github/workflows/matrix-check/action.yml     |  23 +++
 .github/workflows/pkgdown.yaml                |   2 +-
 .github/workflows/update-status/action.yml    |  39 -----
 .../workflows/versions-matrix-read/action.yml |  21 ---
 .github/workflows/versions-matrix/action.R    |  26 ++-
 .github/workflows/versions-matrix/action.yml  |  10 ++
 12 files changed, 211 insertions(+), 215 deletions(-)
 create mode 100644 .github/workflows/R-CMD-check-status.yaml
 delete mode 100644 .github/workflows/dep-suggests-matrix-read/action.yml
 create mode 100644 .github/workflows/get-extra/action.yml
 create mode 100644 .github/workflows/matrix-check/action.yml
 delete mode 100644 .github/workflows/update-status/action.yml
 delete mode 100644 .github/workflows/versions-matrix-read/action.yml

diff --git a/.github/workflows/R-CMD-check-status.yaml b/.github/workflows/R-CMD-check-status.yaml
new file mode 100644
index 000000000..15860acbb
--- /dev/null
+++ b/.github/workflows/R-CMD-check-status.yaml
@@ -0,0 +1,76 @@
+# Workflow to update the status of a commit for the R-CMD-check workflow
+# Necessary because remote PRs cannot update the status of the commit
+on:
+  workflow_run:
+    workflows:
+      - rcc
+    types:
+      - requested
+      - completed
+
+name: rcc-status
+
+jobs:
+  rcc-status:
+    runs-on: ubuntu-latest
+
+    name: "Update commit status"
+
+    # Only run if triggered by rcc workflow
+    if: github.event.workflow_run.name == 'rcc'
+
+    steps:
+      - name: "Update commit status"
+        env:
+          GH_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+        run: |
+          set -x
+
+          if [ "${{ github.event.workflow_run.status }}" == "completed" ]; then
+            if [ "${{ github.event.workflow_run.conclusion }}" == "success" ]; then
+              state="success"
+            else
+              state="failure"
+            fi
+
+            # Read artifact ID
+            artifact_id=$(gh api \
+              -H "Accept: application/vnd.github+json" \
+              -H "X-GitHub-Api-Version: 2022-11-28" \
+              repos/${{ github.repository }}/actions/runs/${{ github.event.workflow_run.id }}/artifacts | jq -r '.artifacts[] | select(.name == "rcc-smoke-sha") | .id')
+
+            if [ -n "${artifact_id}" ]; then
+              # Download artifact
+              curl -L -o rcc-smoke-sha.zip \
+                -H "Accept: application/vnd.github+json" \
+                -H "Authorization: Bearer ${GH_TOKEN}" \
+                -H "X-GitHub-Api-Version: 2022-11-28" \
+                https://api.github.com/repos/${{ github.repository }}/actions/artifacts/${artifact_id}/zip
+
+              # Unzip artifact
+              unzip rcc-smoke-sha.zip
+
+              # Read artifact
+              sha=$(cat rcc-smoke-sha.txt)
+
+              # Clean up
+              rm rcc-smoke-sha.zip rcc-smoke-sha.txt
+            fi
+          else
+            state="pending"
+          fi
+
+          if [ -z "${sha}" ]; then
+            sha=${{ github.event.workflow_run.head_sha }}
+          fi
+
+          html_url=${{ github.event.workflow_run.html_url }}
+          description=${{ github.event.workflow_run.name }}
+
+          gh api \
+            --method POST \
+            -H "Accept: application/vnd.github+json" \
+            -H "X-GitHub-Api-Version: 2022-11-28" \
+            repos/${{ github.repository }}/statuses/${sha} \
+            -f "state=${state}" -f "target_url=${html_url}" -f "description=${description}" -f "context=rcc"
+        shell: bash
diff --git a/.github/workflows/R-CMD-check.yaml b/.github/workflows/R-CMD-check.yaml
index 5c685f598..b622c4807 100644
--- a/.github/workflows/R-CMD-check.yaml
+++ b/.github/workflows/R-CMD-check.yaml
@@ -9,6 +9,8 @@ on:
     branches:
       - main
       - master
+      - release
+      - cran-*
   pull_request:
     branches:
       - main
@@ -36,6 +38,8 @@ jobs:
     runs-on: ubuntu-latest
     outputs:
       sha: ${{ steps.commit.outputs.sha }}
+      versions-matrix: ${{ steps.versions-matrix.outputs.matrix }}
+      dep-suggests-matrix: ${{ steps.dep-suggests-matrix.outputs.matrix }}
 
     name: "Smoke test: stock R"
 
@@ -59,31 +63,34 @@ jobs:
       - uses: ./.github/workflows/install
         with:
           token: ${{ secrets.GITHUB_TOKEN }}
-          install-r: false
           cache-version: rcc-smoke-2
-          needs: check
-          extra-packages: any::rcmdcheck r-lib/roxygen2 any::decor r-lib/styler
+          needs: check, website
+          # Beware of using dev pkgdown here, has brought in dev dependencies in the past
+          extra-packages: any::rcmdcheck r-lib/roxygen2 any::decor r-lib/styler pkgdown
 
       - uses: ./.github/workflows/custom/after-install
         if: hashFiles('.github/workflows/custom/after-install/action.yml') != ''
 
-      - uses: ./.github/workflows/versions-matrix
-        if: github.event_name != 'pull_request' || github.event.pull_request.head.repo.full_name == github.repository
+      - id: versions-matrix
+        # Only run for pull requests if the base repo is different from the head repo, always run for other events
+        if: github.event_name != 'pull_request' || github.event.pull_request.head.repo.full_name != github.repository
+        uses: ./.github/workflows/versions-matrix
 
-      - uses: ./.github/workflows/dep-suggests-matrix
-        if: github.event_name != 'pull_request' || github.event.pull_request.head.repo.full_name == github.repository
+      - id: dep-suggests-matrix
+        uses: ./.github/workflows/dep-suggests-matrix
 
       - uses: ./.github/workflows/update-snapshots
-        if: github.event_name != 'pull_request' || github.event.pull_request.head.repo.full_name == github.repository
 
       - uses: ./.github/workflows/style
-        if: github.event_name != 'pull_request' || github.event.pull_request.head.repo.full_name == github.repository
 
       - uses: ./.github/workflows/roxygenize
-        if: github.event_name != 'pull_request' || github.event.pull_request.head.repo.full_name == github.repository
+
+      - name: Remove config files from previous iteration
+        run: |
+          rm -f .github/dep-suggests-matrix.json .github/versions-matrix.json
+        shell: bash
 
       - id: commit
-        if: github.event_name != 'pull_request' || github.event.pull_request.head.repo.full_name == github.repository
         uses: ./.github/workflows/commit
         with:
           token: ${{ secrets.GITHUB_TOKEN }}
@@ -92,81 +99,51 @@ jobs:
         with:
           results: ${{ runner.os }}-smoke-test
 
-  # Runs in a separate workflow, because it's using dev pkgdown
-  # which might bring in other dev dependencies
-  pkgdown:
-    needs: rcc-smoke
-
-    runs-on: ubuntu-latest
-
-    name: "pkgdown"
-
-    # Begin custom: services
-    # End custom: services
-
-    steps:
-      - uses: actions/checkout@v4
-        with:
-          ref: ${{ needs.rcc-smoke.outputs.sha }}
-
-      - uses: ./.github/workflows/rate-limit
-        with:
-          token: ${{ secrets.GITHUB_TOKEN }}
+      - uses: ./.github/workflows/pkgdown-build
+        if: github.event_name != 'push'
 
-      - uses: ./.github/workflows/git-identity
+      - uses: ./.github/workflows/pkgdown-deploy
         if: github.event_name == 'push'
 
-      - uses: ./.github/workflows/custom/before-install
-        if: hashFiles('.github/workflows/custom/before-install/action.yml') != ''
+      # Upload sha as artifact
+      - run: |
+          echo -n "${{ steps.commit.outputs.sha }}" > rcc-smoke-sha.txt
+        shell: bash
 
-      - uses: ./.github/workflows/install
+      - uses: actions/upload-artifact@v2
         with:
-          token: ${{ secrets.GITHUB_TOKEN }}
-          install-r: false
-          cache-version: pkgdown-1
-          needs: website
-          extra-packages: r-lib/pkgdown local::.
-
-      - uses: ./.github/workflows/custom/after-install
-        if: hashFiles('.github/workflows/custom/after-install/action.yml') != ''
+          name: rcc-smoke-sha
+          path: rcc-smoke-sha.txt
 
-      - uses: ./.github/workflows/pkgdown-build
-        if: github.event_name != 'push'
-
-      - uses: ./.github/workflows/pkgdown-deploy
-        if: github.event_name == 'push'
+  rcc-smoke-check-matrix:
+    runs-on: ubuntu-latest
 
-  versions-matrix:
-    runs-on: ubuntu-22.04
-    outputs:
-      matrix: ${{ steps.set-matrix.outputs.matrix }}
+    name: "Check matrix"
 
-    name: Collect versions
+    needs:
+      - rcc-smoke
 
     steps:
       - uses: actions/checkout@v4
         with:
-          fetch-depth: 0
+          ref: ${{ needs.rcc-smoke.outputs.sha }}
 
-      - uses: ./.github/workflows/rate-limit
+      - uses: ./.github/workflows/matrix-check
         with:
-          token: ${{ secrets.GITHUB_TOKEN }}
+          matrix: ${{ needs.rcc-smoke.outputs.versions-matrix }}
 
-      - uses: r-lib/actions/setup-r@v2
+      - uses: ./.github/workflows/matrix-check
         with:
-          install-r: false
-          use-public-rspm: true
-
-      - id: set-matrix
-        uses: ./.github/workflows/versions-matrix-read
+          matrix: ${{ needs.rcc-smoke.outputs.dep-suggests-matrix }}
 
   rcc-full:
     needs:
       - rcc-smoke
-      - versions-matrix
 
     runs-on: ${{ matrix.os }}
 
+    if: ${{ needs.rcc-smoke.outputs.versions-matrix != '' }}
+
     name: 'rcc: ${{ matrix.os }} (${{ matrix.r }}) ${{ matrix.desc }}'
 
     # Begin custom: services
@@ -174,7 +151,7 @@ jobs:
 
     strategy:
       fail-fast: false
-      matrix: ${{fromJson(needs.versions-matrix.outputs.matrix)}}
+      matrix: ${{fromJson(needs.rcc-smoke.outputs.versions-matrix)}}
 
     steps:
       - uses: actions/checkout@v4
@@ -201,72 +178,22 @@ jobs:
         with:
           results: ${{ runner.os }}-r${{ matrix.r }}
 
-      - uses: ./.github/workflows/update-status
-        if: always()
-        with:
-          sha: ${{ needs.rcc-smoke.outputs.sha }}
-
-  suggests-matrix:
-    runs-on: ubuntu-22.04
-    outputs:
-      matrix: ${{ steps.set-matrix.outputs.matrix }}
-
-    name: Collect suggests deps
-
-    steps:
-      - uses: actions/checkout@v4
-        with:
-          fetch-depth: 0
-
-      - uses: ./.github/workflows/rate-limit
-        with:
-          token: ${{ secrets.GITHUB_TOKEN }}
-
-      - uses: r-lib/actions/setup-r@v2
-        with:
-          install-r: false
-          use-public-rspm: true
-
-      - id: set-matrix
-        uses: ./.github/workflows/dep-suggests-matrix-read
-
-  check-suggests-matrix:
-    runs-on: ubuntu-22.04
-    needs: suggests-matrix
-
-    name: Check suggests deps
-
-    if: ${{ needs.suggests-matrix.outputs.matrix != '' }}
-
-    steps:
-      - name: Install json2yaml
-        run: |
-          sudo npm install -g json2yaml
-
-      - name: Check matrix definition
-        run: |
-          matrix='${{ needs.suggests-matrix.outputs.matrix }}'
-          echo $matrix
-          echo $matrix | jq .
-          echo $matrix | json2yaml
-
   rcc-suggests:
     needs:
       - rcc-smoke
-      - suggests-matrix
 
     runs-on: ubuntu-22.04
 
-    name: Without ${{ matrix.package }}
+    if: ${{ needs.rcc-smoke.outputs.dep-suggests-matrix != '' }}
 
-    if: ${{ needs.suggests-matrix.outputs.matrix != '' }}
+    name: Without ${{ matrix.package }}
 
     # Begin custom: services
     # End custom: services
 
     strategy:
       fail-fast: false
-      matrix: ${{fromJson(needs.suggests-matrix.outputs.matrix)}}
+      matrix: ${{fromJson(needs.rcc-smoke.outputs.dep-suggests-matrix)}}
 
     steps:
       - uses: actions/checkout@v4
diff --git a/.github/workflows/commit/action.yml b/.github/workflows/commit/action.yml
index d5049bc56..ed6f9b896 100644
--- a/.github/workflows/commit/action.yml
+++ b/.github/workflows/commit/action.yml
@@ -20,9 +20,13 @@ runs:
         if [ -n "$(git status --porcelain)" ]; then
           echo "Changed"
           protected=${{ github.ref_protected }}
-          if [ "${protected}" = "true" ]; then
+          foreign=${{ github.event.pull_request.head.repo.full_name != github.repository }}
+          if [ "${foreign}" = "true" ]; then
+            # https://github.com/krlmlr/actions-sync/issues/44
+            echo "Can't push to foreign branch"
+          elif [ "${protected}" = "true" ]; then
             current_branch=$(git branch --show-current)
-            new_branch=gha-commit
+            new_branch=gha-commit-$(git rev-parse --short HEAD)
             git checkout -b ${new_branch}
             git add .
             git commit -m "chore: Auto-update from GitHub Actions"$'\n'$'\n'"Run: ${GITHUB_SERVER_URL}/${GITHUB_REPOSITORY}/actions/runs/${GITHUB_RUN_ID}"
@@ -38,6 +42,7 @@ runs:
             fi
 
             gh workflow run rcc -f ref=$(git rev-parse HEAD)
+            gh pr merge --merge --auto
           else
             git fetch
             if [ -n "${GITHUB_HEAD_REF}" ]; then
@@ -50,8 +55,9 @@ runs:
             git add .
             git commit -m "chore: Auto-update from GitHub Actions"$'\n'$'\n'"Run: ${GITHUB_SERVER_URL}/${GITHUB_REPOSITORY}/actions/runs/${GITHUB_RUN_ID}"
             git push -u origin HEAD
+
+            # Only set output if changed
+            echo sha=$(git rev-parse HEAD) >> $GITHUB_OUTPUT
           fi
         fi
-        # Unconditionally set the output because it could come from a manually triggered run
-        echo sha=$(git rev-parse HEAD) >> $GITHUB_OUTPUT
       shell: bash
diff --git a/.github/workflows/dep-suggests-matrix-read/action.yml b/.github/workflows/dep-suggests-matrix-read/action.yml
deleted file mode 100644
index 39e7a7b23..000000000
--- a/.github/workflows/dep-suggests-matrix-read/action.yml
+++ /dev/null
@@ -1,24 +0,0 @@
-name: "Actions to read a matrix with all suggested packages, computed with the dep-suggests-matrix action"
-outputs:
-  matrix:
-    description: "Generated matrix"
-    value: ${{ steps.set-matrix.outputs.matrix }}
-
-runs:
-  using: "composite"
-  steps:
-    - name: Install json2yaml
-      run: |
-        sudo npm install -g json2yaml
-      shell: bash
-
-    - id: set-matrix
-      run: |
-        # Empty contents if no suggested packages
-        matrix=$(cat .github/dep-suggests-matrix.json || true)
-        if [ -n "$matrix" ]; then
-          echo $matrix | jq .
-          echo $matrix | json2yaml
-        fi
-        echo "matrix=$matrix" | tee -a $GITHUB_OUTPUT
-      shell: bash
diff --git a/.github/workflows/dep-suggests-matrix/action.R b/.github/workflows/dep-suggests-matrix/action.R
index 139519403..eff3a502c 100644
--- a/.github/workflows/dep-suggests-matrix/action.R
+++ b/.github/workflows/dep-suggests-matrix/action.R
@@ -21,9 +21,12 @@ get_deps <- function() {
 
 if (Sys.getenv("GITHUB_BASE_REF") != "") {
   print(Sys.getenv("GITHUB_BASE_REF"))
-  has_diff <- (system("git diff ${{ github.event.pull_request.base.sha }}... | egrep '^[+][^+]' | grep -q ::") == 0)
+  system("git fetch origin ${GITHUB_BASE_REF}")
+  # Use .. to avoid having to fetch the entire history
+  # https://github.com/krlmlr/actions-sync/issues/45
+  has_diff <- (system("git diff origin/${GITHUB_BASE_REF}.. | egrep '^[+][^+]' | grep -q ::") == 0)
   if (has_diff) {
-    system("git diff ${{ github.event.pull_request.base.sha }}... | egrep '^[+][^+]' | grep -q ::")
+    system("git diff origin/${GITHUB_BASE_REF}.. | egrep '^[+][^+]' | grep -q ::")
     packages <- get_deps()
   } else {
     writeLines("No changes using :: found, not checking without suggested packages")
@@ -39,9 +42,8 @@ if (length(packages) > 0) {
     paste0('"', packages, '"', collapse = ","),
     ']}'
   )
+  writeLines(paste0("matrix=", json), Sys.getenv("GITHUB_OUTPUT"))
+  writeLines(json)
 } else {
-  json <- character()
+  writeLines("No suggested packages found.")
 }
-
-writeLines(json, ".github/dep-suggests-matrix.json")
-writeLines(json)
diff --git a/.github/workflows/get-extra/action.yml b/.github/workflows/get-extra/action.yml
new file mode 100644
index 000000000..84c56d9b7
--- /dev/null
+++ b/.github/workflows/get-extra/action.yml
@@ -0,0 +1,16 @@
+name: "Action to determine extra packages to be installed"
+outputs:
+  packages:
+    description: "List of extra packages"
+    value: ${{ steps.get-extra.outputs.packages }}
+
+runs:
+  using: "composite"
+  steps:
+    - name: Get extra packages
+      id: get-extra
+      run: |
+        set -x
+        packages=$( ( grep Config/gha/extra-packages DESCRIPTION || true ) | cut -d " " -f 2)
+        echo packages=$packages >> $GITHUB_OUTPUT
+      shell: bash
diff --git a/.github/workflows/matrix-check/action.yml b/.github/workflows/matrix-check/action.yml
new file mode 100644
index 000000000..b94304819
--- /dev/null
+++ b/.github/workflows/matrix-check/action.yml
@@ -0,0 +1,23 @@
+name: "Actions to check a matrix with all R and OS versions, computed with the versions-matrix action"
+inputs:
+  matrix:
+    description: "Generated matrix"
+    required: true
+
+runs:
+  using: "composite"
+  steps:
+    - name: Install json2yaml
+      run: |
+        sudo npm install -g json2yaml
+      shell: bash
+
+    - run: |
+        matrix='${{ inputs.matrix }}'
+        if [ -n "${matrix}" ]; then
+          echo $matrix | jq .
+          echo $matrix | json2yaml
+        else
+          echo "No matrix found"
+        fi
+      shell: bash
diff --git a/.github/workflows/pkgdown.yaml b/.github/workflows/pkgdown.yaml
index de69b1494..a2206afc4 100644
--- a/.github/workflows/pkgdown.yaml
+++ b/.github/workflows/pkgdown.yaml
@@ -42,7 +42,7 @@ jobs:
           install-r: false
           cache-version: pkgdown-2
           needs: website
-          extra-packages: r-lib/pkgdown local::.
+          extra-packages: pkgdown
 
       - uses: ./.github/workflows/custom/after-install
         if: hashFiles('.github/workflows/custom/after-install/action.yml') != ''
diff --git a/.github/workflows/update-status/action.yml b/.github/workflows/update-status/action.yml
deleted file mode 100644
index d9462fce3..000000000
--- a/.github/workflows/update-status/action.yml
+++ /dev/null
@@ -1,39 +0,0 @@
-name: 'Update status'
-description: 'Update status'
-inputs:
-  sha:
-    description: 'SHA to update'
-    required: true
-
-runs:
-  using: "composite"
-  steps:
-    # It's difficult to get the URL of the current job.
-    # The /jobs API and/or the `github` context are misaligned.
-    # The duckdbneo repository contains several failed attempts.
-    - run: |
-        set -x
-        if [ -n '${{ inputs.sha }}' ]; then
-          export GH_TOKEN=${{ github.token }}
-
-          html_url=$(gh api \
-            -H "Accept: application/vnd.github+json" \
-            -H "X-GitHub-Api-Version: 2022-11-28" \
-            repos/${{ github.repository }}/actions/runs/${{ github.run_id }} | jq -r .html_url)
-
-          # Check if a failing status has been set already
-          status=$(gh api \
-            -H "Accept: application/vnd.github+json" \
-            -H "X-GitHub-Api-Version: 2022-11-28" \
-            repos/${{ github.repository }}/commits/${{ inputs.sha }}/status | jq -r .state)
-
-          if [ "${status}" != "error" ] && [ "${status}" != "failure" ]; then
-            gh api \
-              --method POST \
-              -H "Accept: application/vnd.github+json" \
-              -H "X-GitHub-Api-Version: 2022-11-28" \
-              repos/${{ github.repository }}/statuses/${{ inputs.sha }} \
-              -f "state=${{ job.status }}" -f "target_url=$html_url" -f "description=${{ github.workflow }} / ${{ github.job }}" -f "context=actions-sync"
-          fi
-        fi
-      shell: bash
diff --git a/.github/workflows/versions-matrix-read/action.yml b/.github/workflows/versions-matrix-read/action.yml
deleted file mode 100644
index 4aa463975..000000000
--- a/.github/workflows/versions-matrix-read/action.yml
+++ /dev/null
@@ -1,21 +0,0 @@
-name: "Actions to read a matrix with all R and OS versions, computed with the versions-matrix action"
-outputs:
-  matrix:
-    description: "Generated matrix"
-    value: ${{ steps.set-matrix.outputs.matrix }}
-
-runs:
-  using: "composite"
-  steps:
-    - name: Install json2yaml
-      run: |
-        sudo npm install -g json2yaml
-      shell: bash
-
-    - id: set-matrix
-      run: |
-        matrix=$(cat .github/versions-matrix.json || echo '{"include":[{"os":"macos-latest","r":"release"}]}')
-        echo $matrix | jq .
-        echo $matrix | json2yaml
-        echo "matrix=$matrix" | tee -a $GITHUB_OUTPUT
-      shell: bash
diff --git a/.github/workflows/versions-matrix/action.R b/.github/workflows/versions-matrix/action.R
index 4a59fe66b..b8e2dcfb1 100644
--- a/.github/workflows/versions-matrix/action.R
+++ b/.github/workflows/versions-matrix/action.R
@@ -1,5 +1,25 @@
-# FIXME: Dynamic lookup by parsing https://svn.r-project.org/R/tags/
-r_versions <- c("devel", paste0("4.", 4:0))
+# Determine active versions of R to test against
+tags <- xml2::read_html("https://svn.r-project.org/R/tags/")
+
+bullets <-
+  tags |>
+  xml2::xml_find_all("//li") |>
+  xml2::xml_text()
+
+version_bullets <- grep("^R-([0-9]+-[0-9]+-[0-9]+)/$", bullets, value = TRUE)
+versions <- unique(gsub("^R-([0-9]+)-([0-9]+)-[0-9]+/$", "\\1.\\2", version_bullets))
+
+r_release <- head(sort(as.package_version(versions), decreasing = TRUE), 5)
+
+deps <- desc::desc_get_deps()
+r_crit <- deps$version[deps$package == "R"]
+if (length(r_crit) == 1) {
+  min_r <- as.package_version(gsub("^>= ([0-9]+[.][0-9]+)(?:.*)$", "\\1", r_crit))
+  r_release <- r_release[r_release >= min_r]
+}
+
+r_versions <- c("devel", as.character(r_release))
+
 macos <- data.frame(os = "macos-latest", r = r_versions[2:3])
 windows <- data.frame(os = "windows-latest", r = r_versions[1:3])
 linux_devel <- data.frame(os = "ubuntu-22.04", r = r_versions[1], `http-user-agent` = "release", check.names = FALSE)
@@ -36,5 +56,5 @@ to_json <- function(x) {
 configs <- unlist(lapply(include_list, to_json))
 json <- paste0('{"include":[', paste(configs, collapse = ","), ']}')
 
-writeLines(json, ".github/versions-matrix.json")
+writeLines(paste0("matrix=", json), Sys.getenv("GITHUB_OUTPUT"))
 writeLines(json)
diff --git a/.github/workflows/versions-matrix/action.yml b/.github/workflows/versions-matrix/action.yml
index 6ac164b8f..af7378a1b 100644
--- a/.github/workflows/versions-matrix/action.yml
+++ b/.github/workflows/versions-matrix/action.yml
@@ -1,8 +1,18 @@
 name: "Actions to compute a matrix with all R and OS versions"
 
+outputs:
+  matrix:
+    description: "Generated matrix"
+    value: ${{ steps.set-matrix.outputs.matrix }}
+
 runs:
   using: "composite"
   steps:
+    - name: Install json2yaml
+      run: |
+        sudo npm install -g json2yaml
+      shell: bash
+
     - id: set-matrix
       run: |
         Rscript ./.github/workflows/versions-matrix/action.R

From f431263bc6264333e8f5a56a458b2c2c4376cb61 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Kirill=20M=C3=BCller?= <kirill@cynkra.com>
Date: Fri, 30 Aug 2024 06:26:00 +0200
Subject: [PATCH 17/26] ci: Improve support for protected branches with fledge

---
 .github/workflows/fledge.yaml | 68 ++++++++++++++++++++++++++++++-----
 1 file changed, 59 insertions(+), 9 deletions(-)

diff --git a/.github/workflows/fledge.yaml b/.github/workflows/fledge.yaml
index 81c2d0c0a..d880c55d7 100644
--- a/.github/workflows/fledge.yaml
+++ b/.github/workflows/fledge.yaml
@@ -3,12 +3,18 @@ name: fledge
 on:
   # for manual triggers
   workflow_dispatch:
+    inputs:
+      pr:
+        description: "Create PR"
+        required: false
+        type: boolean
+        default: false
   # daily run
   schedule:
   - cron: "30 0 * * *"
 
 concurrency:
-  group: ${{ github.workflow }}-${{ github.ref }}-${{ github.head_ref || github.sha }}-${{ github.base_ref || '' }}
+  group: ${{ github.workflow }}-${{ github.ref }}-${{ github.head_ref || '' }}-${{ github.base_ref || '' }}
   cancel-in-progress: true
 
 jobs:
@@ -19,8 +25,12 @@ jobs:
     steps:
       - name: Check if the repo is forked
         id: check
+        env:
+          GH_TOKEN: ${{ secrets.GITHUB_TOKEN }}
         run: |
-          echo "is_forked=$(curl -s -H "Accept: application/vnd.github+json" -H 'Authorization: Bearer ${{ github.token }}' -H "X-GitHub-Api-Version: 2022-11-28" ${GITHUB_API_URL}/repos/${GITHUB_REPOSITORY} | jq .fork)" >> $GITHUB_OUTPUT
+          is_forked=$(gh api repos/${{ github.repository }} | jq .fork)
+          echo "is_forked=${is_forked}" >> $GITHUB_OUTPUT
+        shell: bash
 
   fledge:
     runs-on: ubuntu-latest
@@ -28,31 +38,71 @@ jobs:
     if: needs.check_fork.outputs.is_forked == 'false'
     permissions:
       contents: write
+      pull-requests: write
+      actions: write
     env:
-      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
       FLEDGE_GHA_CI: true
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v2
         with:
           fetch-depth: 0
 
-      - uses: ./.github/workflows/git-identity
+      - name: Configure Git identity
+        run: |
+          env | sort
+          git config --local user.name "$GITHUB_ACTOR"
+          git config --local user.email "$GITHUB_ACTOR@users.noreply.github.com"
+        shell: bash
+
+      - name: Update apt
+        run: |
+          sudo apt-get update
+        shell: bash
 
-      - uses: ./.github/workflows/install
+      - uses: r-lib/actions/setup-r@v2
         with:
-          token: ${{ secrets.GITHUB_TOKEN }}
           install-r: false
-          cache-version: fledge-1
+          use-public-rspm: true
+
+      - uses: r-lib/actions/setup-r-dependencies@v2
+        env:
+          GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+        with:
+          pak-version: devel
           packages: cynkra/fledge
+          cache-version: fledge-1
+
+      - name: Switch to branch if branch protection is enabled
+        if: github.ref_protected == 'true' || inputs.pr == 'true'
+        run: |
+          git checkout -b fledge
+          git push -f -u origin HEAD
+        shell: bash
 
       - name: Bump version
+        env:
+          GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
         run: |
-          if (fledge::bump_version(which = "dev", no_change_behavior = "noop")) {
+          check_default_branch <- ("${{ github.ref_protected == 'true' || inputs.pr == 'true' }}" != "true")
+          if (fledge::bump_version(which = "dev", no_change_behavior = "noop", check_default_branch = check_default_branch)) {
             fledge::finalize_version(push = TRUE)
           }
         shell: Rscript {0}
 
+      - name: Create and merge PR if branch protection is enabled
+        if: github.ref_protected == 'true' || inputs.pr == 'true'
+        env:
+          GH_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+        run: |
+          set -x
+          gh pr create --base main --head fledge --fill-first
+          gh workflow run rcc -f ref=$(git rev-parse HEAD)
+          gh pr merge --merge --auto
+        shell: bash
+
       - name: Check release
+        env:
+          GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
         run: |
           fledge:::release_after_cran_built_binaries()
         shell: Rscript {0}

From 2327383be129502288d99d3b55d6c64c92ea5633 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Kirill=20M=C3=BCller?= <kirill@cynkra.com>
Date: Fri, 30 Aug 2024 07:45:48 +0200
Subject: [PATCH 18/26] ci: Install local package for pkgdown builds

---
 .github/workflows/R-CMD-check.yaml | 2 +-
 .github/workflows/pkgdown.yaml     | 2 +-
 2 files changed, 2 insertions(+), 2 deletions(-)

diff --git a/.github/workflows/R-CMD-check.yaml b/.github/workflows/R-CMD-check.yaml
index b622c4807..d238a6bc2 100644
--- a/.github/workflows/R-CMD-check.yaml
+++ b/.github/workflows/R-CMD-check.yaml
@@ -66,7 +66,7 @@ jobs:
           cache-version: rcc-smoke-2
           needs: check, website
           # Beware of using dev pkgdown here, has brought in dev dependencies in the past
-          extra-packages: any::rcmdcheck r-lib/roxygen2 any::decor r-lib/styler pkgdown
+          extra-packages: any::rcmdcheck r-lib/roxygen2 any::decor r-lib/styler pkgdown local::.
 
       - uses: ./.github/workflows/custom/after-install
         if: hashFiles('.github/workflows/custom/after-install/action.yml') != ''
diff --git a/.github/workflows/pkgdown.yaml b/.github/workflows/pkgdown.yaml
index a2206afc4..09dc06382 100644
--- a/.github/workflows/pkgdown.yaml
+++ b/.github/workflows/pkgdown.yaml
@@ -42,7 +42,7 @@ jobs:
           install-r: false
           cache-version: pkgdown-2
           needs: website
-          extra-packages: pkgdown
+          extra-packages: pkgdown local::.
 
       - uses: ./.github/workflows/custom/after-install
         if: hashFiles('.github/workflows/custom/after-install/action.yml') != ''

From ea7251ac81ec1062d3b35dbf56360798d0793ca3 Mon Sep 17 00:00:00 2001
From: krlmlr <krlmlr@users.noreply.github.com>
Date: Sat, 31 Aug 2024 01:51:07 +0000
Subject: [PATCH 19/26] Bump version to 1.9.0.9022

---
 DESCRIPTION |  2 +-
 NEWS.md     | 11 +++++++++++
 2 files changed, 12 insertions(+), 1 deletion(-)

diff --git a/DESCRIPTION b/DESCRIPTION
index 07da370f8..58abf3a16 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -1,6 +1,6 @@
 Package: pillar
 Title: Coloured Formatting for Columns
-Version: 1.9.0.9021
+Version: 1.9.0.9022
 Authors@R: 
     c(person(given = "Kirill",
              family = "M\u00fcller",
diff --git a/NEWS.md b/NEWS.md
index 6ff34aabd..cb7ab0f15 100644
--- a/NEWS.md
+++ b/NEWS.md
@@ -1,5 +1,16 @@
 <!-- NEWS.md is maintained by https://fledge.cynkra.com, contributors should not edit this file -->
 
+# pillar 1.9.0.9022
+
+## Continuous integration
+
+  - Install local package for pkgdown builds.
+
+  - Improve support for protected branches with fledge.
+
+  - Improve support for protected branches, without fledge.
+
+
 # pillar 1.9.0.9021
 
 ## Continuous integration

From e4b9b37d387f812d36982c91ac4daf3514b13b97 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Kirill=20M=C3=BCller?= <krlmlr@users.noreply.github.com>
Date: Sat, 14 Sep 2024 10:37:59 +0200
Subject: [PATCH 20/26] ci: Install via R CMD INSTALL ., not pak (#672)

* ci: Install via R CMD INSTALL ., not pak

* ci: Bump version of upload-artifact action
---
 .github/workflows/R-CMD-check.yaml | 9 +++++++--
 1 file changed, 7 insertions(+), 2 deletions(-)

diff --git a/.github/workflows/R-CMD-check.yaml b/.github/workflows/R-CMD-check.yaml
index d238a6bc2..428cec137 100644
--- a/.github/workflows/R-CMD-check.yaml
+++ b/.github/workflows/R-CMD-check.yaml
@@ -66,7 +66,12 @@ jobs:
           cache-version: rcc-smoke-2
           needs: check, website
           # Beware of using dev pkgdown here, has brought in dev dependencies in the past
-          extra-packages: any::rcmdcheck r-lib/roxygen2 any::decor r-lib/styler pkgdown local::.
+          extra-packages: any::rcmdcheck r-lib/roxygen2 any::decor r-lib/styler pkgdown deps::.
+
+      - name: Install package
+        run: |
+          R CMD INSTALL .
+        shell: bash
 
       - uses: ./.github/workflows/custom/after-install
         if: hashFiles('.github/workflows/custom/after-install/action.yml') != ''
@@ -110,7 +115,7 @@ jobs:
           echo -n "${{ steps.commit.outputs.sha }}" > rcc-smoke-sha.txt
         shell: bash
 
-      - uses: actions/upload-artifact@v2
+      - uses: actions/upload-artifact@v4
         with:
           name: rcc-smoke-sha
           path: rcc-smoke-sha.txt

From 6f6e9dc89d4dbaf983ca02b151b5ab1cbf7518ca Mon Sep 17 00:00:00 2001
From: krlmlr <krlmlr@users.noreply.github.com>
Date: Sun, 15 Sep 2024 02:07:27 +0000
Subject: [PATCH 21/26] Bump version to 1.9.0.9023

---
 DESCRIPTION |  2 +-
 NEWS.md     | 11 +++++++++++
 2 files changed, 12 insertions(+), 1 deletion(-)

diff --git a/DESCRIPTION b/DESCRIPTION
index 58abf3a16..e7a00cb9c 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -1,6 +1,6 @@
 Package: pillar
 Title: Coloured Formatting for Columns
-Version: 1.9.0.9022
+Version: 1.9.0.9023
 Authors@R: 
     c(person(given = "Kirill",
              family = "M\u00fcller",
diff --git a/NEWS.md b/NEWS.md
index cb7ab0f15..82a94f689 100644
--- a/NEWS.md
+++ b/NEWS.md
@@ -1,5 +1,16 @@
 <!-- NEWS.md is maintained by https://fledge.cynkra.com, contributors should not edit this file -->
 
+# pillar 1.9.0.9023
+
+## Continuous integration
+
+  - Install via R CMD INSTALL ., not pak (#672).
+    
+      - ci: Install via R CMD INSTALL ., not pak
+    
+      - ci: Bump version of upload-artifact action
+
+
 # pillar 1.9.0.9022
 
 ## Continuous integration

From 49a63dec52f440b65cde9172831e2e6402b24398 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Kirill=20M=C3=BCller?= <kirill@cynkra.com>
Date: Sat, 19 Oct 2024 18:38:14 +0200
Subject: [PATCH 22/26] chore: Revdepcheck results

---
 revdep/README.md   |  8 +----
 revdep/cran.md     | 14 ++------
 revdep/failures.md | 42 ++++++++++++------------
 revdep/problems.md | 82 +---------------------------------------------
 4 files changed, 26 insertions(+), 120 deletions(-)

diff --git a/revdep/README.md b/revdep/README.md
index 8da62ac3d..5377f304a 100644
--- a/revdep/README.md
+++ b/revdep/README.md
@@ -4,11 +4,5 @@
 
 |package    |version |error |warning |note |
 |:----------|:-------|:-----|:-------|:----|
-|incidence2 |1.2.3   |1     |        |     |
-
-## New problems (1)
-
-|package |version |error  |warning |note |
-|:-------|:-------|:------|:-------|:----|
-|[prt](problems.md#prt)|0.1.5   |__+2__ |__+1__  |     |
+|tidyseurat |0.8.0   |1     |        |     |
 
diff --git a/revdep/cran.md b/revdep/cran.md
index f9b3f6301..95a78e658 100644
--- a/revdep/cran.md
+++ b/revdep/cran.md
@@ -1,20 +1,12 @@
 ## revdepcheck results
 
-We checked 100 reverse dependencies, comparing R CMD check results across CRAN and dev versions of this package.
+We checked 122 reverse dependencies, comparing R CMD check results across CRAN and dev versions of this package.
 
- * We saw 1 new problems
+ * We saw 0 new problems
  * We failed to check 1 packages
 
 Issues with CRAN packages are summarised below.
 
-### New problems
-(This reports the first line of each new failure)
-
-* prt
-  checking examples ... ERROR
-  checking tests ... ERROR
-  checking re-building of vignette outputs ... WARNING
-
 ### Failed to check
 
-* incidence2 (NA)
+* tidyseurat (NA)
diff --git a/revdep/failures.md b/revdep/failures.md
index 4097552ba..a49456a4a 100644
--- a/revdep/failures.md
+++ b/revdep/failures.md
@@ -1,23 +1,23 @@
-# incidence2
+# tidyseurat
 
 <details>
 
-* Version: 1.2.3
-* GitHub: https://github.com/reconverse/incidence2
-* Source code: https://github.com/cran/incidence2
-* Date/Publication: 2021-11-07 22:00:02 UTC
-* Number of recursive dependencies: 87
+* Version: 0.8.0
+* GitHub: https://github.com/stemangiola/tidyseurat
+* Source code: https://github.com/cran/tidyseurat
+* Date/Publication: 2024-01-10 04:50:02 UTC
+* Number of recursive dependencies: 195
 
-Run `revdepcheck::cloud_details(, "incidence2")` for more info
+Run `revdepcheck::cloud_details(, "tidyseurat")` for more info
 
 </details>
 
 ## In both
 
-*   checking whether package ‘incidence2’ can be installed ... ERROR
+*   checking whether package ‘tidyseurat’ can be installed ... ERROR
     ```
     Installation failed.
-    See ‘/tmp/workdir/incidence2/new/incidence2.Rcheck/00install.out’ for details.
+    See ‘/tmp/workdir/tidyseurat/new/tidyseurat.Rcheck/00install.out’ for details.
     ```
 
 ## Installation
@@ -25,38 +25,38 @@ Run `revdepcheck::cloud_details(, "incidence2")` for more info
 ### Devel
 
 ```
-* installing *source* package ‘incidence2’ ...
-** package ‘incidence2’ successfully unpacked and MD5 sums checked
+* installing *source* package ‘tidyseurat’ ...
+** package ‘tidyseurat’ successfully unpacked and MD5 sums checked
 ** using staged installation
 ** R
 ** data
 *** moving datasets to lazyload DB
 ** inst
 ** byte-compile and prepare package for lazy loading
-Error : The `x` argument of `as_tibble()` can't be missing as of tibble 3.0.0.
-Error: unable to load R code in package ‘incidence2’
+Error: package or namespace load failed for ‘SeuratObject’ in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
+ namespace ‘Matrix’ 1.5-4.1 is already loaded, but >= 1.6.4 is required
 Execution halted
-ERROR: lazy loading failed for package ‘incidence2’
-* removing ‘/tmp/workdir/incidence2/new/incidence2.Rcheck/incidence2’
+ERROR: lazy loading failed for package ‘tidyseurat’
+* removing ‘/tmp/workdir/tidyseurat/new/tidyseurat.Rcheck/tidyseurat’
 
 
 ```
 ### CRAN
 
 ```
-* installing *source* package ‘incidence2’ ...
-** package ‘incidence2’ successfully unpacked and MD5 sums checked
+* installing *source* package ‘tidyseurat’ ...
+** package ‘tidyseurat’ successfully unpacked and MD5 sums checked
 ** using staged installation
 ** R
 ** data
 *** moving datasets to lazyload DB
 ** inst
 ** byte-compile and prepare package for lazy loading
-Error : The `x` argument of `as_tibble()` can't be missing as of tibble 3.0.0.
-Error: unable to load R code in package ‘incidence2’
+Error: package or namespace load failed for ‘SeuratObject’ in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
+ namespace ‘Matrix’ 1.5-4.1 is already loaded, but >= 1.6.4 is required
 Execution halted
-ERROR: lazy loading failed for package ‘incidence2’
-* removing ‘/tmp/workdir/incidence2/old/incidence2.Rcheck/incidence2’
+ERROR: lazy loading failed for package ‘tidyseurat’
+* removing ‘/tmp/workdir/tidyseurat/old/tidyseurat.Rcheck/tidyseurat’
 
 
 ```
diff --git a/revdep/problems.md b/revdep/problems.md
index db8ee8a0a..9a2073633 100644
--- a/revdep/problems.md
+++ b/revdep/problems.md
@@ -1,81 +1 @@
-# prt
-
-<details>
-
-* Version: 0.1.5
-* GitHub: https://github.com/nbenn/prt
-* Source code: https://github.com/cran/prt
-* Date/Publication: 2022-07-18 09:40:02 UTC
-* Number of recursive dependencies: 67
-
-Run `revdepcheck::cloud_details(, "prt")` for more info
-
-</details>
-
-## Newly broken
-
-*   checking examples ... ERROR
-    ```
-    Running examples in ‘prt-Ex.R’ failed
-    The error most likely occurred in:
-    
-    > ### Name: print.prt
-    > ### Title: Printing prt
-    > ### Aliases: print.prt format.prt trunc_dt
-    > 
-    > ### ** Examples
-    > 
-    > cars <- as_prt(mtcars)
-    ...
-      9.   ├─base::format(x, ..., n = n, width = width, max_extra_cols = max_extra_cols)
-     10.   └─prt:::format.prt(x, ..., n = n, width = width, max_extra_cols = max_extra_cols)
-     11.     ├─base::format(trunc_dt(x, n = n, width = width, max_extra_cols = max_extra_cols))
-     12.     └─prt::trunc_dt(x, n = n, width = width, max_extra_cols = max_extra_cols)
-     13.       └─prt:::shrink_dt(df, rows)
-     14.         └─pillar::colonnade(df, has_row_id = FALSE)
-     15.           └─lifecycle::deprecate_stop("1.9.0", "pillar::colonnade()", "pillar::tbl_format_setup()")
-     16.             └─lifecycle:::deprecate_stop0(msg)
-     17.               └─rlang::cnd_signal(...)
-    Execution halted
-    ```
-
-*   checking tests ... ERROR
-    ```
-      Running ‘testthat.R’
-    Running the tests in ‘tests/testthat.R’ failed.
-    Last 13 lines of output:
-       16.   │ │     └─base::is.factor(x)
-       17.   │ └─base::paste0(...)
-       18.   ├─base::format(x, ..., n = n, width = width, max_extra_cols = max_extra_cols)
-       19.   └─prt:::format.prt(x, ..., n = n, width = width, max_extra_cols = max_extra_cols)
-       20.     ├─base::format(trunc_dt(x, n = n, width = width, max_extra_cols = max_extra_cols))
-       21.     └─prt::trunc_dt(x, n = n, width = width, max_extra_cols = max_extra_cols)
-       22.       └─prt:::shrink_dt(df, rows)
-       23.         └─pillar::colonnade(df, has_row_id = FALSE)
-       24.           └─lifecycle::deprecate_stop("1.9.0", "pillar::colonnade()", "pillar::tbl_format_setup()")
-       25.             └─lifecycle:::deprecate_stop0(msg)
-       26.               └─rlang::cnd_signal(...)
-      
-      [ FAIL 4 | WARN 0 | SKIP 0 | PASS 257 ]
-      Error: Test failures
-      Execution halted
-    ```
-
-*   checking re-building of vignette outputs ... WARNING
-    ```
-    Error(s) in re-building vignettes:
-      ...
-    --- re-building ‘prt.Rmd’ using rmarkdown
-    Quitting from lines 35-37 (prt.Rmd) 
-    Error: processing vignette 'prt.Rmd' failed with diagnostics:
-    `colonnade()` was deprecated in pillar 1.9.0 and is now defunct.
-    ℹ Please use `tbl_format_setup()` instead.
-    --- failed re-building ‘prt.Rmd’
-    
-    SUMMARY: processing the following file failed:
-      ‘prt.Rmd’
-    
-    Error: Vignette re-building failed.
-    Execution halted
-    ```
-
+*Wow, no problems at all. :)*
\ No newline at end of file

From 640717e82e3fb70051c5aa7767138055979b738e Mon Sep 17 00:00:00 2001
From: krlmlr <krlmlr@users.noreply.github.com>
Date: Sun, 20 Oct 2024 02:10:30 +0000
Subject: [PATCH 23/26] Bump version to 1.9.0.9024

---
 DESCRIPTION | 2 +-
 NEWS.md     | 7 +++++++
 2 files changed, 8 insertions(+), 1 deletion(-)

diff --git a/DESCRIPTION b/DESCRIPTION
index e7a00cb9c..edff1c6a8 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -1,6 +1,6 @@
 Package: pillar
 Title: Coloured Formatting for Columns
-Version: 1.9.0.9023
+Version: 1.9.0.9024
 Authors@R: 
     c(person(given = "Kirill",
              family = "M\u00fcller",
diff --git a/NEWS.md b/NEWS.md
index 82a94f689..b8b54ef71 100644
--- a/NEWS.md
+++ b/NEWS.md
@@ -1,5 +1,12 @@
 <!-- NEWS.md is maintained by https://fledge.cynkra.com, contributors should not edit this file -->
 
+# pillar 1.9.0.9024
+
+## Chore
+
+  - Revdepcheck results.
+
+
 # pillar 1.9.0.9023
 
 ## Continuous integration

From a856202f4800c34d27553984a3ac0e146d14a189 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Kirill=20M=C3=BCller?= <krlmlr@users.noreply.github.com>
Date: Sun, 27 Oct 2024 05:53:30 +0100
Subject: [PATCH 24/26] ci: Use pkgdown branch (#674)

* ci: Use pkgdown branch

* ci: Updates from duckdb
---
 .github/workflows/R-CMD-check-status.yaml     |  5 +-
 .github/workflows/R-CMD-check.yaml            | 94 ++++++++++++++++++-
 .github/workflows/pkgdown.yaml                |  2 +-
 .github/workflows/update-snapshots/action.yml |  9 +-
 4 files changed, 99 insertions(+), 11 deletions(-)

diff --git a/.github/workflows/R-CMD-check-status.yaml b/.github/workflows/R-CMD-check-status.yaml
index 15860acbb..b9bdf4e4a 100644
--- a/.github/workflows/R-CMD-check-status.yaml
+++ b/.github/workflows/R-CMD-check-status.yaml
@@ -16,11 +16,10 @@ jobs:
 
     name: "Update commit status"
 
-    # Only run if triggered by rcc workflow
-    if: github.event.workflow_run.name == 'rcc'
-
     steps:
       - name: "Update commit status"
+        # Only run if triggered by rcc workflow
+        if: github.event.workflow_run.name == 'rcc'
         env:
           GH_TOKEN: ${{ secrets.GITHUB_TOKEN }}
         run: |
diff --git a/.github/workflows/R-CMD-check.yaml b/.github/workflows/R-CMD-check.yaml
index 428cec137..56ae58c6b 100644
--- a/.github/workflows/R-CMD-check.yaml
+++ b/.github/workflows/R-CMD-check.yaml
@@ -18,9 +18,17 @@ on:
   workflow_dispatch:
     inputs:
       ref:
-        description: "Branch or tag to check out"
+        description: "Branch, tag, or commit to check out"
         required: false
         default: "main"
+      versions-matrix:
+        description: "Create a matrix of R versions"
+        type: boolean
+        default: false
+      dep-suggests-matrix:
+        description: "Create a matrix of suggested dependencies"
+        type: boolean
+        default: false
   merge_group:
     types:
       - checks_requested
@@ -51,6 +59,38 @@ jobs:
         with:
           ref: ${{ inputs.ref }}
 
+      - name: Update status for rcc
+        # FIXME: Wrap into action
+        if: github.event_name == 'workflow_dispatch'
+        env:
+          GH_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+        run: |
+          # Check status of this workflow
+          state="pending"
+          sha=${{ inputs.ref }}
+          if [ -z "${sha}" ]; then
+            sha=${{ github.head_ref }}
+          fi
+          if [ -z "${sha}" ]; then
+            sha=${{ github.sha }}
+          fi
+          sha=$(git rev-parse ${sha})
+
+          html_url=$(gh api \
+            -H "Accept: application/vnd.github+json" \
+            -H "X-GitHub-Api-Version: 2022-11-28" \
+            repos/${{ github.repository }}/actions/runs/${{ github.run_id }} | jq -r .html_url)
+
+          description="${{ github.workflow }} / ${{ github.job }}"
+
+          gh api \
+            --method POST \
+            -H "Accept: application/vnd.github+json" \
+            -H "X-GitHub-Api-Version: 2022-11-28" \
+            repos/${{ github.repository }}/statuses/${sha} \
+            -f "state=${state}" -f "target_url=${html_url}" -f "description=${description}" -f "context=rcc"
+        shell: bash
+
       - uses: ./.github/workflows/rate-limit
         with:
           token: ${{ secrets.GITHUB_TOKEN }}
@@ -66,25 +106,29 @@ jobs:
           cache-version: rcc-smoke-2
           needs: check, website
           # Beware of using dev pkgdown here, has brought in dev dependencies in the past
-          extra-packages: any::rcmdcheck r-lib/roxygen2 any::decor r-lib/styler pkgdown deps::.
+          extra-packages: any::rcmdcheck r-lib/roxygen2 any::decor r-lib/styler r-lib/pkgdown@f-readme-tweak deps::.
 
       - name: Install package
         run: |
-          R CMD INSTALL .
+          _R_SHLIB_STRIP_=true R CMD INSTALL .
         shell: bash
 
       - uses: ./.github/workflows/custom/after-install
         if: hashFiles('.github/workflows/custom/after-install/action.yml') != ''
 
       - id: versions-matrix
-        # Only run for pull requests if the base repo is different from the head repo, always run for other events
-        if: github.event_name != 'pull_request' || github.event.pull_request.head.repo.full_name != github.repository
+        # Only run for pull requests if the base repo is different from the head repo, not for workflow_dispatch if not requested, always run for other events
+        if: (github.event_name != 'pull_request' || github.event.pull_request.head.repo.full_name != github.repository) && (github.event_name != 'workflow_dispatch' || inputs.versions-matrix)
         uses: ./.github/workflows/versions-matrix
 
       - id: dep-suggests-matrix
+        # Not for workflow_dispatch if not requested, always run for other events
+        if: github.event_name != 'workflow_dispatch' || inputs.dep-suggests-matrix
         uses: ./.github/workflows/dep-suggests-matrix
 
       - uses: ./.github/workflows/update-snapshots
+        with:
+          base: ${{ inputs.ref || github.head_ref }}
 
       - uses: ./.github/workflows/style
 
@@ -120,6 +164,46 @@ jobs:
           name: rcc-smoke-sha
           path: rcc-smoke-sha.txt
 
+      - name: Update status for rcc
+        # FIXME: Wrap into action
+        if: always() && github.event_name == 'workflow_dispatch'
+        env:
+          GH_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+        run: |
+          # Check status of this workflow
+          if [ "${{ job.status }}" == "success" ]; then
+            state="success"
+          else
+            state="failure"
+          fi
+
+          sha=${{ steps.commit.outputs.sha }}
+          if [ -z "${sha}" ]; then
+            sha=${{ inputs.ref }}
+          fi
+          if [ -z "${sha}" ]; then
+            sha=${{ github.head_ref }}
+          fi
+          if [ -z "${sha}" ]; then
+            sha=${{ github.sha }}
+          fi
+            sha=$(git rev-parse ${sha})
+
+          html_url=$(gh api \
+            -H "Accept: application/vnd.github+json" \
+            -H "X-GitHub-Api-Version: 2022-11-28" \
+            repos/${{ github.repository }}/actions/runs/${{ github.run_id }} | jq -r .html_url)
+
+          description="${{ github.workflow }} / ${{ github.job }}"
+
+          gh api \
+            --method POST \
+            -H "Accept: application/vnd.github+json" \
+            -H "X-GitHub-Api-Version: 2022-11-28" \
+            repos/${{ github.repository }}/statuses/${sha} \
+            -f "state=${state}" -f "target_url=${html_url}" -f "description=${description}" -f "context=rcc"
+        shell: bash
+
   rcc-smoke-check-matrix:
     runs-on: ubuntu-latest
 
diff --git a/.github/workflows/pkgdown.yaml b/.github/workflows/pkgdown.yaml
index 09dc06382..6afddb16f 100644
--- a/.github/workflows/pkgdown.yaml
+++ b/.github/workflows/pkgdown.yaml
@@ -42,7 +42,7 @@ jobs:
           install-r: false
           cache-version: pkgdown-2
           needs: website
-          extra-packages: pkgdown local::.
+          extra-packages: r-lib/pkgdown@f-readme-tweak local::.
 
       - uses: ./.github/workflows/custom/after-install
         if: hashFiles('.github/workflows/custom/after-install/action.yml') != ''
diff --git a/.github/workflows/update-snapshots/action.yml b/.github/workflows/update-snapshots/action.yml
index 6322dc156..5ee7e3ecc 100644
--- a/.github/workflows/update-snapshots/action.yml
+++ b/.github/workflows/update-snapshots/action.yml
@@ -3,6 +3,11 @@ description: >
   This action will run `testthat::test_local()` for tests that seem to use snapshots,
   this is determined by reading and grepping the test files.
   If the tests are failing, snapshots are updated, and a pull request is opened.
+inputs:
+  base:
+    description: "The base branch to create the pull request against."
+    required: false
+    default: "main"
 
 runs:
   using: "composite"
@@ -67,8 +72,8 @@ runs:
       id: cpr
       uses: peter-evans/create-pull-request@v6
       with:
-        base: ${{ github.head_ref }}
-        branch: snapshot-${{ github.ref_name }}-${{ github.job }}-${{ steps.matrix-desc.outputs.branch }}
+        base: ${{ inputs.base }}
+        branch: snapshot-${{ inputs.base }}-${{ github.job }}-${{ steps.matrix-desc.outputs.branch }}
         delete-branch: true
         title: "test: Snapshot updates for ${{ github.job }} (${{ steps.matrix-desc.outputs.text }})"
         body: "Automated changes by [create-pull-request](https://github.com/peter-evans/create-pull-request) GitHub action${{ github.event.number && format(' for #{0}', github.event.number) || '' }}."

From 167c94354088af93ceebd24f4bac4a914ae51a3c Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Kirill=20M=C3=BCller?= <krlmlr@users.noreply.github.com>
Date: Sun, 27 Oct 2024 06:09:54 +0100
Subject: [PATCH 25/26] ci: Trigger run (#675)

---
 .github/workflows/R-CMD-check.yaml | 1 +
 1 file changed, 1 insertion(+)

diff --git a/.github/workflows/R-CMD-check.yaml b/.github/workflows/R-CMD-check.yaml
index 56ae58c6b..e2234cde6 100644
--- a/.github/workflows/R-CMD-check.yaml
+++ b/.github/workflows/R-CMD-check.yaml
@@ -41,6 +41,7 @@ concurrency:
 
 name: rcc
 
+
 jobs:
   rcc-smoke:
     runs-on: ubuntu-latest

From 8c9a06afb1adbace35dec0c9899d6ed0528205cb Mon Sep 17 00:00:00 2001
From: krlmlr <krlmlr@users.noreply.github.com>
Date: Mon, 28 Oct 2024 02:07:52 +0000
Subject: [PATCH 26/26] Bump version to 1.9.0.9025

---
 DESCRIPTION |  2 +-
 NEWS.md     | 13 +++++++++++++
 2 files changed, 14 insertions(+), 1 deletion(-)

diff --git a/DESCRIPTION b/DESCRIPTION
index edff1c6a8..20429ae09 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -1,6 +1,6 @@
 Package: pillar
 Title: Coloured Formatting for Columns
-Version: 1.9.0.9024
+Version: 1.9.0.9025
 Authors@R: 
     c(person(given = "Kirill",
              family = "M\u00fcller",
diff --git a/NEWS.md b/NEWS.md
index b8b54ef71..b52d20d26 100644
--- a/NEWS.md
+++ b/NEWS.md
@@ -1,5 +1,18 @@
 <!-- NEWS.md is maintained by https://fledge.cynkra.com, contributors should not edit this file -->
 
+# pillar 1.9.0.9025
+
+## Continuous integration
+
+  - Trigger run (#675).
+
+  - Use pkgdown branch (#674).
+    
+      - ci: Use pkgdown branch
+    
+      - ci: Updates from duckdb
+
+
 # pillar 1.9.0.9024
 
 ## Chore