Merge pull request #147 from raphael-group/default-ini

Count-alleles should be set to "True" by default
raphael-group · Jul 14, 2022 · 2f60bb6 · 2f60bb6
2 parents 9925e11 + c148451
commit 2f60bb6
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/script/hatchet.ini b/script/hatchet.ini
@@ -6,7 +6,7 @@ count_reads=True
 genotype_snps=True
 phase_snps=True
 fixed_width=False # True uses older fixed-width versions of some commands
-count_alleles=False
+count_alleles=True
 combine_counts=True
 cluster_bins=True
 loc_clust=True # True uses new locality-aware clustering