Add hdf5 as env dependency. Install dynamic library deps

ratschlab · Feb 15, 2022 · a45e87b · a45e87b
1 parent 380d2a4
commit a45e87b
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Showing 2 changed files with 7 additions and 3 deletions.
diff --git a/CMakeLists.txt b/CMakeLists.txt
@@ -108,13 +108,16 @@ gtest_discover_tests(tests)
 file(COPY tests/data DESTINATION ${CMAKE_CURRENT_BINARY_DIR})
 
 install(
-    TARGETS pileup
+    TARGETS pileup variant_calling similarity_matrix spectral_clustering expectation_maximization BamTools util
+    progress_bar armadillo spdlog
     ARCHIVE DESTINATION ${CMAKE_INSTALL_LIBDIR}
     LIBRARY DESTINATION ${CMAKE_INSTALL_LIBDIR}
-    RUNTIME DESTINATION ${CMAKE_INSTALL_BINDIR})
+    RUNTIME DESTINATION ${CMAKE_INSTALL_BINDIR}
+    )
 
 install(
     TARGETS secedo
     ARCHIVE DESTINATION ${CMAKE_INSTALL_LIBDIR}
     LIBRARY DESTINATION ${CMAKE_INSTALL_LIBDIR}
-    RUNTIME DESTINATION ${CMAKE_INSTALL_BINDIR})
+    RUNTIME DESTINATION ${CMAKE_INSTALL_BINDIR}
+   )
diff --git a/environment.yml b/environment.yml
@@ -4,6 +4,7 @@ dependencies:
   - cxx-compiler
   - make
   - cmake
+  - hdf5
   - openmp
   - openblas
-Original file line number
+Diff line change
@@ Expand Up / @@ -4,6 +4,7 @@ dependencies: @@
       - cxx-compiler
       - make
       - cmake
+      - hdf5
       - openmp
       - openblas