v0.5.0: package metadata in pyproject.toml & Similarity.depth

Commits

• b077168 Similarity.depth function
• 829c084 README: update CI badge
• 758388c pre-commit autoupdate & flake8 repo
• b13b0ef CI: update action dependencies, test py 3.11
• 71e203f CI: fix setup-graphviz config (#24)
• abbd3d2 pre-commit autoupdate & move mypy config
• 883eedb pre-commit: switch to ruff
• 3cf1b4d move package metadata to pyproject.toml

Full Changelog: v0.4.1...v0.5.0

v0.4.1: nxontology metadata & python >= 3.8

Commits

• bb4acda fsspec dependency: require http extras
• 7f4ba41 readme: link to nxontology-data
• 4c31d04 add nxontology metadata to new instances
• 14873e1 upgrade python requires >= 3.8

Full Changelog: v0.4.0...v0.4.1

v0.4.0: refactoring & additional graph/node properties

Commits

• 6cc2b48 split similarity/node/utils from ontology module (#19)
• d019783 NodeInfo: roots & leaves properties
• 6b6829c Node_Info: parents, children, paths_* properties
• 3a0cd3a NXOntology.root property
• be4e985 node_info_by_name
• 09cd067 rename node label to node name
• 8c32548 retain more metadata from pronto
• db12684 CI: build python 3.10
• 9cdcf06 pre-commit: pyupgrade with __future__.annotations

Full Changelog: v0.3.4...v0.4.0

v0.3.4: fix graph data preservation during transitive reduction

Full Changelog: v0.3.3...v0.3.4

v0.3.3: preserve data during transitive reduction

What's Changed

• Preserve node/edge/graph data in multidigraph_to_digraph by @dhimmel in #18

Full Changelog: v0.3.2...v0.3.3

v0.3.2: transitive reduction of multiple relationship types

What's Changed

• multidigraph_to_digraph transitive reduction option by @dhimmel in #16

Full Changelog: v0.3.1...v0.3.2

v0.3.1: load ontologies with multiple relationship types

Changes

edde267 update config & pre-commit dependencies
b7679f2 Support extraction of multiple relationships types using Pronto (#15)

v0.3.0: bug fixes, convenience methods, better error message

Changes

57e2851 NXOntology.check_is_dag: show cycles in error message
5bd9d6e NXOntology.n_edges
8d1ffde Include isolates in roots & leaves (potentially breaking change)
6c2b154 Similarity.batet_log: fix -0.0 sign

v0.2.1: improved support for type hints

Use generic type annotation for nodes in NxOntology (#9)

merges https://github.com/related-sciences/nxontology/pull/9

v0.2.0: import methods to load ontologies via pronto

readme: fix OWL URL typo