v1.7

NEW FEATURES

• create_consensus_topology_conservation can save multiple sequence alignment

MINOR IMPROVEMENTS

• None

BUG FIXES

• None

DEPRECATED AND DEFUNCT

• None

v1.6

• Allow to specify temp filenames for Windows, instead of /dev/null, for Windows users, thanks @Joshua260403
• Update EpitopePrediction interface after jtextor/epitope-prediction#1

v1.5

• Can use EpitopePrediction to predict IC50s of MHC-I haplotypes
• Can use netmhc2pan to predict IC50s of MHC-II haplotypes

v1.4

NEW FEATURES

• Use 21 MHC-II classes, instead of 13
• MHC-II uses a 13-mer, instead of a 9-mer

MINOR IMPROVEMENTS

• Work on per-haplotype per-protein basis

BUG FIXES

• None

DEPRECATED AND DEFUNCT

• None

v1.3

• Use of 13 MHC-II haplotypes, before switching back to 21

v1.2

• Use mhcnuggetsr
• Use more other repos

v1.1

• Use pureseqtmr instead of tmhmm
• Removed use of netmhc2pan

v1.0.2

Minor updates

v1.0.1

Builds on Xenial

v1.0

First release