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pyproject.toml
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pyproject.toml
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[project]
name = "softcopy"
version = "0.0.2"
description = "Copies zarr archives from an acquisition frontend to a different disk, using filesystem watching and lockfiles to allow copying during acquisition."
authors = [{ name = "Seth Hinz", email = "[email protected]" }]
readme = "README.md"
keywords = ['python']
requires-python = ">=3.11"
dependencies = [
"numpy==2.1.1",
"watchdog>=5.0.3",
"psutil>=6.0.0",
"click>=8.1.7",
"pyyaml>=6.0.2",
"tensorstore>=0.1.66",
]
[project.urls]
Homepage = "https://royerlab.github.io/softcopy/"
Repository = "https://github.com/royerlab/softcopy"
Documentation = "https://royerlab.github.io/softcopy/"
[project.scripts]
softcopy = "softcopy.main:main"
# slow_write = "softcopy.slow_write:main"
# to_ome = "softcopy.add_ome_metadata:main"
[tool.uv]
dev-dependencies = [
"pytest>=7.2.0",
"pre-commit>=2.20.0",
"tox-uv>=1.11.3",
"deptry>=0.20.0",
"mypy>=0.991",
"ruff>=0.0.235",
"pytest-cov>=5.0.0",
]
[build-system]
requires = ["setuptools >= 61.0"]
build-backend = "setuptools.build_meta"
[tool.mypy]
files = ["softcopy"]
disallow_untyped_defs = "True"
disallow_any_unimported = "True"
no_implicit_optional = "True"
check_untyped_defs = "True"
warn_return_any = "True"
warn_unused_ignores = "True"
show_error_codes = "True"
[tool.pytest.ini_options]
testpaths = ["tests"]
[tool.ruff]
target-version = "py39"
line-length = 120
fix = true
[tool.ruff.lint]
select = [
# flake8-2020
"YTT",
# flake8-bandit
"S",
# flake8-bugbear
"B",
# flake8-builtins
"A",
# flake8-comprehensions
"C4",
# flake8-debugger
"T10",
# flake8-simplify
"SIM",
# isort
"I",
# mccabe
"C90",
# pycodestyle
"E", "W",
# pyflakes
"F",
# pygrep-hooks
"PGH",
# pyupgrade
"UP",
# ruff
"RUF",
# tryceratops
"TRY",
]
ignore = [
# LineTooLong
"E501",
# DoNotAssignLambda
"E731",
# Avoid specifying long messages outside the exception class
"TRY003"
]
[tool.ruff.lint.per-file-ignores]
"tests/*" = ["S101"]
[tool.ruff.format]
preview = true