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rpetit3 · Aug 8, 2024 · 03fe725 · 03fe725
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diff --git a/v0.3.1/api/engines/blast/index.html b/v0.3.1/api/engines/blast/index.html
@@ -877,10 +877,10 @@ <h1 id="blast">Blast<a class="headerlink" href="#blast" title="Permanent link">&
 <div class="doc doc-object doc-function">
 
 
-<h2 id="camlhmp.engines.blast.run_blast" class="doc doc-heading">
+<h3 id="camlhmp.engines.blast.run_blast" class="doc doc-heading">
             <code class="highlight language-python"><span class="n">camlhmp</span><span class="o">.</span><span class="n">engines</span><span class="o">.</span><span class="n">blast</span><span class="o">.</span><span class="n">run_blast</span><span class="p">(</span><span class="n">engine</span><span class="p">,</span> <span class="n">subject</span><span class="p">,</span> <span class="n">query</span><span class="p">,</span> <span class="n">min_pident</span><span class="p">,</span> <span class="n">min_coverage</span><span class="p">)</span></code>
 
-<a href="#camlhmp.engines.blast.run_blast" class="headerlink" title="Permanent link">&para;</a></h2>
+<a href="#camlhmp.engines.blast.run_blast" class="headerlink" title="Permanent link">&para;</a></h3>
 
 
     <div class="doc doc-contents first">
@@ -1095,10 +1095,10 @@ <h2 id="camlhmp.engines.blast.run_blast" class="doc doc-heading">
 <div class="doc doc-object doc-function">
 
 
-<h2 id="camlhmp.engines.blast.run_blastn" class="doc doc-heading">
+<h3 id="camlhmp.engines.blast.run_blastn" class="doc doc-heading">
             <code class="highlight language-python"><span class="n">camlhmp</span><span class="o">.</span><span class="n">engines</span><span class="o">.</span><span class="n">blast</span><span class="o">.</span><span class="n">run_blastn</span><span class="p">(</span><span class="n">subject</span><span class="p">,</span> <span class="n">query</span><span class="p">,</span> <span class="n">min_pident</span><span class="p">,</span> <span class="n">min_coverage</span><span class="p">)</span></code>
 
-<a href="#camlhmp.engines.blast.run_blastn" class="headerlink" title="Permanent link">&para;</a></h2>
+<a href="#camlhmp.engines.blast.run_blastn" class="headerlink" title="Permanent link">&para;</a></h3>
 
 
     <div class="doc doc-contents first">
@@ -1237,10 +1237,10 @@ <h2 id="camlhmp.engines.blast.run_blastn" class="doc doc-heading">
 <div class="doc doc-object doc-function">
 
 
-<h2 id="camlhmp.engines.blast.run_tblastn" class="doc doc-heading">
+<h3 id="camlhmp.engines.blast.run_tblastn" class="doc doc-heading">
             <code class="highlight language-python"><span class="n">camlhmp</span><span class="o">.</span><span class="n">engines</span><span class="o">.</span><span class="n">blast</span><span class="o">.</span><span class="n">run_tblastn</span><span class="p">(</span><span class="n">subject</span><span class="p">,</span> <span class="n">query</span><span class="p">,</span> <span class="n">min_pident</span><span class="p">,</span> <span class="n">min_coverage</span><span class="p">)</span></code>
 
-<a href="#camlhmp.engines.blast.run_tblastn" class="headerlink" title="Permanent link">&para;</a></h2>
+<a href="#camlhmp.engines.blast.run_tblastn" class="headerlink" title="Permanent link">&para;</a></h3>
 
 
     <div class="doc doc-contents first">

diff --git a/v0.3.1/api/parsers/blast/index.html b/v0.3.1/api/parsers/blast/index.html
@@ -737,9 +737,10 @@
     </span>
   </a>
 
-</li>
-
-        <li class="md-nav__item">
+    <nav class="md-nav" aria-label="get_blast_allele_hits">
+      <ul class="md-nav__list">
+
+          <li class="md-nav__item">
   <a href="#camlhmp.parsers.blast.get_blast_allele_hits" class="md-nav__link">
     <span class="md-ellipsis">
 
@@ -748,6 +749,11 @@
     </span>
   </a>
 
+</li>
+
+      </ul>
+    </nav>
+
 </li>
 
         <li class="md-nav__item">
@@ -759,9 +765,10 @@
     </span>
   </a>
 
-</li>
-
-        <li class="md-nav__item">
+    <nav class="md-nav" aria-label="get_blast_region_hits">
+      <ul class="md-nav__list">
+
+          <li class="md-nav__item">
   <a href="#camlhmp.parsers.blast.get_blast_region_hits" class="md-nav__link">
     <span class="md-ellipsis">
 
@@ -770,6 +777,11 @@
     </span>
   </a>
 
+</li>
+
+      </ul>
+    </nav>
+
 </li>
 
         <li class="md-nav__item">
@@ -781,9 +793,10 @@
     </span>
   </a>
 
-</li>
-
-        <li class="md-nav__item">
+    <nav class="md-nav" aria-label="get_blast_target_hits">
+      <ul class="md-nav__list">
+
+          <li class="md-nav__item">
   <a href="#camlhmp.parsers.blast.get_blast_target_hits" class="md-nav__link">
     <span class="md-ellipsis">
 
@@ -792,6 +805,11 @@
     </span>
   </a>
 
+</li>
+
+      </ul>
+    </nav>
+
 </li>
 
     </ul>
@@ -853,9 +871,10 @@
     </span>
   </a>
 
-</li>
-
-        <li class="md-nav__item">
+    <nav class="md-nav" aria-label="get_blast_allele_hits">
+      <ul class="md-nav__list">
+
+          <li class="md-nav__item">
   <a href="#camlhmp.parsers.blast.get_blast_allele_hits" class="md-nav__link">
     <span class="md-ellipsis">
 
@@ -864,6 +883,11 @@
     </span>
   </a>
 
+</li>
+
+      </ul>
+    </nav>
+
 </li>
 
         <li class="md-nav__item">
@@ -875,9 +899,10 @@
     </span>
   </a>
 
-</li>
-
-        <li class="md-nav__item">
+    <nav class="md-nav" aria-label="get_blast_region_hits">
+      <ul class="md-nav__list">
+
+          <li class="md-nav__item">
   <a href="#camlhmp.parsers.blast.get_blast_region_hits" class="md-nav__link">
     <span class="md-ellipsis">
 
@@ -886,6 +911,11 @@
     </span>
   </a>
 
+</li>
+
+      </ul>
+    </nav>
+
 </li>
 
         <li class="md-nav__item">
@@ -897,9 +927,10 @@
     </span>
   </a>
 
-</li>
-
-        <li class="md-nav__item">
+    <nav class="md-nav" aria-label="get_blast_target_hits">
+      <ul class="md-nav__list">
+
+          <li class="md-nav__item">
   <a href="#camlhmp.parsers.blast.get_blast_target_hits" class="md-nav__link">
     <span class="md-ellipsis">
 
@@ -908,6 +939,11 @@
     </span>
   </a>
 
+</li>
+
+      </ul>
+    </nav>
+
 </li>
 
     </ul>
@@ -942,10 +978,10 @@ <h2 id="get_blast_allele_hits"><code>get_blast_allele_hits</code><a class="heade
 <div class="doc doc-object doc-function">
 
 
-<h2 id="camlhmp.parsers.blast.get_blast_allele_hits" class="doc doc-heading">
+<h3 id="camlhmp.parsers.blast.get_blast_allele_hits" class="doc doc-heading">
             <code class="highlight language-python"><span class="n">camlhmp</span><span class="o">.</span><span class="n">parsers</span><span class="o">.</span><span class="n">blast</span><span class="o">.</span><span class="n">get_blast_allele_hits</span><span class="p">(</span><span class="n">targets</span><span class="p">,</span> <span class="n">results</span><span class="p">,</span> <span class="n">min_pident</span><span class="p">,</span> <span class="n">min_coverage</span><span class="p">)</span></code>
 
-<a href="#camlhmp.parsers.blast.get_blast_allele_hits" class="headerlink" title="Permanent link">&para;</a></h2>
+<a href="#camlhmp.parsers.blast.get_blast_allele_hits" class="headerlink" title="Permanent link">&para;</a></h3>
 
 
     <div class="doc doc-contents first">
@@ -1233,10 +1269,10 @@ <h2 id="camlhmp.parsers.blast.get_blast_allele_hits" class="doc doc-heading">
 <div class="doc doc-object doc-function">
 
 
-<h2 id="camlhmp.parsers.blast.get_blast_region_hits" class="doc doc-heading">
+<h3 id="camlhmp.parsers.blast.get_blast_region_hits" class="doc doc-heading">
             <code class="highlight language-python"><span class="n">camlhmp</span><span class="o">.</span><span class="n">parsers</span><span class="o">.</span><span class="n">blast</span><span class="o">.</span><span class="n">get_blast_region_hits</span><span class="p">(</span><span class="n">targets</span><span class="p">,</span> <span class="n">results</span><span class="p">,</span> <span class="n">min_pident</span><span class="p">,</span> <span class="n">min_coverage</span><span class="p">)</span></code>
 
-<a href="#camlhmp.parsers.blast.get_blast_region_hits" class="headerlink" title="Permanent link">&para;</a></h2>
+<a href="#camlhmp.parsers.blast.get_blast_region_hits" class="headerlink" title="Permanent link">&para;</a></h3>
 
 
     <div class="doc doc-contents first">
@@ -1476,10 +1512,10 @@ <h2 id="camlhmp.parsers.blast.get_blast_region_hits" class="doc doc-heading">
 <div class="doc doc-object doc-function">
 
 
-<h2 id="camlhmp.parsers.blast.get_blast_target_hits" class="doc doc-heading">
+<h3 id="camlhmp.parsers.blast.get_blast_target_hits" class="doc doc-heading">
             <code class="highlight language-python"><span class="n">camlhmp</span><span class="o">.</span><span class="n">parsers</span><span class="o">.</span><span class="n">blast</span><span class="o">.</span><span class="n">get_blast_target_hits</span><span class="p">(</span><span class="n">targets</span><span class="p">,</span> <span class="n">results</span><span class="p">)</span></code>
 
-<a href="#camlhmp.parsers.blast.get_blast_target_hits" class="headerlink" title="Permanent link">&para;</a></h2>
+<a href="#camlhmp.parsers.blast.get_blast_target_hits" class="headerlink" title="Permanent link">&para;</a></h3>
 
 
     <div class="doc doc-contents first">