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Commits on Jun 7, 2024

• Add link to new paper

  rrwick

  committed
  d1f2450

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Commits on Feb 7, 2024

• Fix error messages

  rrwick

  committed
  fb54520

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• Merge pull request #20 from lavafroth/faster-rounding

  Show description for f9be6e0
  rrwick

  authored
  f9be6e0

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• Extra line break

  rrwick

  authored
  225b4da

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Commits on Jan 22, 2024

• feat: faster rounding with bitwise and operation

  lavafroth

  committed
  8a92e5e

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Commits on Jan 15, 2024

• Remove old CI badge

  rrwick

  committed
  7523fd2

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• Include FASTA descriptions in output

  rrwick

  committed
  ca53a8e

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• Add load_fasta tests

  rrwick

  committed
  ea22188

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Commits on Jan 12, 2024

• Add --careful option

  rrwick

  committed
  9cf49fd

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• Remove unnecessary references

  rrwick

  committed
  3d866ab

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Commits on Jan 11, 2024

• Format code

  rrwick

  committed
  7ba1c0b

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• Fix bug in get_orientation

  rrwick

  committed
  dfad550

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• Format code

  rrwick

  committed
  590d455

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• Add same-reference-sequence checks

  rrwick

  committed
  16f2b82

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• Improve efficiency

  rrwick

  committed
  b235d3c

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• Don't store read sequences in Alignment when not needed

  rrwick

  committed
  c479adf

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• Add estimated qscore

  rrwick

  committed
  a5a7935

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• Update dependency versions

  rrwick

  committed
  39f04b6

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• Update Rust version and edition

  rrwick

  committed
  96599b6

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• Remove scripts dir

  rrwick

  committed
  19d1f06

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• Add tests

  rrwick

  committed
  ba209c3

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Commits on Jan 10, 2024

• Bump version

  rrwick

  committed
  a3f14a2

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• Implement insert size filter in Rust

  rrwick

  committed
  06db6d4

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• Split Polypolish into subcommands

  rrwick

  committed
  23c9d83

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Commits on Jul 25, 2022

• Small changes to human-readable script output

  rrwick

  committed
  c04dae7

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Commits on Jun 29, 2022

• Allow padding of zero

  rrwick

  committed
  a4ddc38

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• Fix error messages and change mappy preset

  rrwick

  committed
  71f1731

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Commits on Jun 21, 2022

• Add settings to stderr message

  rrwick

  committed
  95fd412

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Commits on Jun 17, 2022

• Use mappy to do affine-gap alignment

  rrwick

  committed
  b053f3a

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Commits on May 30, 2022

• Fix after-filtering alignment counts

  rrwick

  committed
  de62102

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Commits on Feb 2, 2022

• Update manuscript link

  rrwick

  committed
  5dbc15a

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Commits on Jan 13, 2022

• Add script to produce human-readable output

  rrwick

  committed
  06f8529

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• Update to work with clap v3

  rrwick

  committed
  6f5cecf

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Commits on Jan 12, 2022

• Add Cython pxd file

  rrwick

  committed
  22431cc

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Commits on Dec 5, 2021

• Fix bug with * CIGAR

  rrwick

  committed
  2cd381d

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