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DESCRIPTION
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DESCRIPTION
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Package: microbiotaPair
Version: 0.0.2
Date: 2020-01-7
Title: An R Package for Simplified Microbiome Analysis Workflows
on Intervention Study
Author: Huahui Ren
Maintainer: Huahui Ren <[email protected]>
Description: An R Package for Simplified Microbiome Analysis Workflows
on Intervention Study
License: GPL
Encoding: UTF-8
LazyData: true
URL: https://github.com/rusher321/microbiotaPair
BugReports: https://github.com/rusher321/microbiotaPair/issues
RoxygenNote: 7.1.1
NeedsCompilation: no
Packaged: 2020-01-01 09:53:27 UTC; pz
Suggests:
knitr,
rmarkdown,
roxygen2
VignetteBuilder: knitr
Depends:
R (>= 3.5.0)
Imports:
ggplot2 (>= 3.2.0),
ggpubr (>= 0.4.0),
tidyr (>= 0.8.1),
dplyr (>= 0.8.1),
tibble (>= 2.1.3),
varhandle (>= 2.0.3),
vegan (>= 2.5-6),
microbiome (>= 1.8.0),
phyloseq (>= 1.30.0),
data.table (>= 1.12.6),
tsnemicrobiota (>= 0.1.0),
geepack (>= 1.3-1),
igraph (>= 1.2.5),
Matrix (>= 1.2-17),
SpiecEasi (>= 1.0.7),
iNEXT (>= 2.0.20),
grid (>= 3.6.1),
pROC (>= 1.16.2),
ade4 (>= 1.7-15),
tsnemicrobiota (>= 0.1.0),
ppcor (>= 1.1)