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On page three of "Using the Bio::TraDIS pipeline" pdf file the user is directed to download a .bam file using curl. The ftp link provided no longer exists, but the http link to the file in the ebi website still works correctly.
On page three of "Using the Bio::TraDIS pipeline" pdf file the user is directed to download a .bam file using
curl
. The ftp link provided no longer exists, but the http link to the file in the ebi website still works correctly.The incorrect line is:
"curl ftp://ftp.sra.ebi.ac.uk/vol1/ERA320/ERA320707/bam/12418_1%2310.bam > 12418_1#10.bam"
It should be:
"curl ftp://ftp.sra.ebi.ac.uk/vol1/run/ERR541/ERR541286/12418_1%2310.bam > 12418_1#10.bam"
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