From 6de504939e87e9b2e74f9c9f1ff239559f085568 Mon Sep 17 00:00:00 2001 From: andrewjpage Date: Thu, 7 Sep 2017 14:36:41 +0100 Subject: [PATCH] fix cd hit download directory --- .travis.yml | 5 ++--- install_dependencies.sh | 4 ++-- 2 files changed, 4 insertions(+), 5 deletions(-) diff --git a/.travis.yml b/.travis.yml index c5a419f..5789ffe 100644 --- a/.travis.yml +++ b/.travis.yml @@ -10,15 +10,14 @@ cache: - build/parallel-20160722 - build/parallel-20170822 - build/bedtools2 - - build/cd-hit-v4.6.8-2017-0621-source + - build/cd-hit-v4.6.8-2017-0621 - build/prank-msa-master - build/ncbi-blast-2.6.0+ - build/mcl-14-137 - build/fasttree perl: - "5.14" - - "5.20" - - "5.24" + - "5.26" env: - PARALLEL_VERSION=20160722 - PARALLEL_VERSION=20170822 diff --git a/install_dependencies.sh b/install_dependencies.sh index 8ab5566..253ed7b 100755 --- a/install_dependencies.sh +++ b/install_dependencies.sh @@ -16,9 +16,9 @@ BEDTOOLS_DOWNLOAD_FILENAME="bedtools-${BEDTOOLS_VERSION}.tar.gz" BEDTOOLS_URL="https://github.com/arq5x/bedtools2/releases/download/v${BEDTOOLS_VERSION}/${BEDTOOLS_DOWNLOAD_FILENAME}" CDHIT_SHORT_VERSION="4.6.8" -CDHIT_LONG_VERSION="4.6.8-2017-0621-source" +CDHIT_LONG_VERSION="4.6.8-2017-0621" CDHIT_DOWNLOAD_FILENAME="cd-hit-${CDHIT_SHORT_VERSION}.tar.gz" -CDHIT_URL="https://github.com/weizhongli/cdhit/releases/download/V${CDHIT_SHORT_VERSION}/cd-hit-v${CDHIT_LONG_VERSION}.tar.gz" +CDHIT_URL="https://github.com/weizhongli/cdhit/releases/download/V${CDHIT_SHORT_VERSION}/cd-hit-v${CDHIT_LONG_VERSION}-source.tar.gz" PRANK_VERSION="0.140603" PRANK_DOWNLOAD_FILENAME="prank-msa-master.tar.gz"