Merge pull request #29 from sanjaynagi/allow-python3.10-17-04-23

Allow python 3.10 and 3.11 and test in CI
sanjaynagi · Apr 17, 2023 · 0015c4c · 0015c4c
2 parents 9d13641 + 563e14b
commit 0015c4c
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diff --git a/.github/workflows/github-action-anoexpress.yaml b/.github/workflows/github-action-anoexpress.yaml
@@ -4,13 +4,17 @@ on: [push]
 
 jobs:
   run:
+    strategy:
+      fail-fast: true
+      matrix:
+          python-version: ['3.7', '3.10', '3.11']
     runs-on: ubuntu-latest
     steps:
     - uses: actions/checkout@v3
     - name: Set up Python
       uses: actions/setup-python@v4
       with:
-        python-version: '3.7'
+        python-version:  ${{ matrix.python-version }}
     - run: python3 -m pip install anoexpress malariagen_data nbformat ipykernel papermill nbconvert
     - run: python -m ipykernel install --user --name anoexpress
     - run: papermill workflow/notebooks/plot-gene-expression.ipynb ci.ipynb -k anoexpress

diff --git a/pyproject.toml b/pyproject.toml
@@ -11,7 +11,7 @@ packages = [
 license = "MIT"
 
 [tool.poetry.dependencies]
-python = ">=3.7.1,<3.10"
+python = ">=3.7.1"
 malariagen_data = "*"
 pandas = [
     {version="<1.4", python=">=3.7.1,<3.8"},