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agent_config.yaml
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agent_config.yaml
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# metamodel_version: 1.7.0# version: 3.5.4id: agent
schema_generating: true
description: person, group, organization or project that provides a piece of information
(i.e. a knowledge association)
display_name: agent
document_category: agent
weight: 20
fields:
- id: iri
description: An IRI for an entity. This is determined by the id using expansion
rules.
display_name: iri
- id: type
display_name: type
cardinality: multi
- id: description
description: a human-readable description of an entity
display_name: description
- id: has_attribute
description: connects any entity to an attribute
display_name: has attribute
cardinality: multi
- id: provided_by
description: The value in this node property represents the knowledge provider that
created or assembled the node and all of its attributes. Used internally to represent
how a particular node made its way into a knowledge provider or graph.
display_name: provided by
cardinality: multi
- id: xref
description: A database cross reference or alternative identifier for a NamedThing
or edge between two NamedThings. This property should point to a database record
or webpage that supports the existence of the edge, or gives more detail about
the edge. This property can be used on a node or edge to provide multiple URIs
or CURIE cross references.
display_name: xref
cardinality: multi
- id: full_name
description: a long-form human readable name for a thing
display_name: full name
- id: synonym
description: Alternate human-readable names for a thing
display_name: synonym
cardinality: multi
- id: category
description: "Name of the high level ontology class in which this entity is categorized.\
\ Corresponds to the label for the biolink entity type class.\n * In a neo4j database\
\ this MAY correspond to the neo4j label tag.\n * In an RDF database it should\
\ be a biolink model class URI.\nThis field is multi-valued. It should include\
\ values for ancestors of the biolink class; for example, a protein such as Shh\
\ would have category values `biolink:Protein`, `biolink:GeneProduct`, `biolink:MolecularEntity`,\
\ ...\nIn an RDF database, nodes will typically have an rdf:type triples. This\
\ can be to the most specific biolink class, or potentially to a class more specific\
\ than something in biolink. For example, a sequence feature `f` may have a rdf:type\
\ assertion to a SO class such as TF_binding_site, which is more specific than\
\ anything in biolink. Here we would have categories {biolink:GenomicEntity, biolink:MolecularEntity,\
\ biolink:NamedThing}"
display_name: named thing_category
cardinality: multi
- id: affiliation
description: a professional relationship between one provider (often a person) within
another provider (often an organization). Target provider identity should be specified
by a CURIE. Providers may have multiple affiliations.
display_name: affiliation
cardinality: multi
- id: address
description: the particulars of the place where someone or an organization is situated. For
now, this slot is a simple text "blob" containing all relevant details of the
given location for fitness of purpose. For the moment, this "address" can include
other contact details such as email and phone number(?).
display_name: address
- id: id
description: Different classes of agents have distinct preferred identifiers. For
publishers, use the ISBN publisher code. See https://grp.isbn-international.org/
for publisher code lookups. For editors, authors and individual providers, use
the individual's ORCID if available; Otherwise, a ScopusID, ResearchID or Google
Scholar ID ('GSID') may be used if the author ORCID is unknown. Institutional
agents could be identified by an International Standard Name Identifier ('ISNI')
code.
display_name: agent_id
- id: name
description: it is recommended that an author's 'name' property be formatted as
"surname, firstname initial."
display_name: agent_name