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@@ -39,14 +39,14 @@ jobs: | |
with: | ||
path: dist | ||
|
||
test: | ||
unix-test: | ||
# This workflow only runs on the origin org | ||
if: github.repository_owner == 'sgkit-dev' | ||
needs: ['build'] | ||
strategy: | ||
matrix: | ||
# don't use macos-latest as it uses M1 which doesn't work | ||
os: [ubuntu-latest, macos-12, windows-latest] | ||
os: [ubuntu-latest, macos-12] | ||
python-version: ["3.9", "3.10", "3.11"] | ||
runs-on: ${{ matrix.os }} | ||
steps: | ||
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@@ -70,11 +70,40 @@ jobs: | |
python sgkit-copy/.github/scripts/test_sgkit_bgen.py | ||
python sgkit-copy/.github/scripts/test_sgkit_plink.py | ||
windows-test: | ||
# This workflow only runs on the origin org | ||
if: github.repository_owner == 'sgkit-dev' | ||
runs-on: windows-latest | ||
needs: ['build'] | ||
strategy: | ||
matrix: | ||
python-version: ["3.9"] | ||
steps: | ||
# checkout repo to subdirectory to get access to scripts | ||
- uses: actions/checkout@v2 | ||
with: | ||
path: sgkit-copy | ||
- name: Download artifacts | ||
uses: actions/[email protected] | ||
- name: Set up Python ${{ matrix.python-version }} | ||
uses: actions/setup-python@v2 | ||
with: | ||
python-version: ${{ matrix.python-version }} | ||
- name: Install wheel and test | ||
run: | | ||
python -VV | ||
# Install the local wheel | ||
$env:wheel = $(ls artifact/sgkit-*.whl) | ||
pip install $env:wheel "$env:wheel[bgen]" "$env:wheel[plink]" | ||
python sgkit-copy/.github/scripts/test_sgkit.py | ||
python sgkit-copy/.github/scripts/test_sgkit_bgen.py | ||
python sgkit-copy/.github/scripts/test_sgkit_plink.py | ||
pypi-upload: | ||
if: github.repository_owner == 'sgkit-dev' | ||
runs-on: ubuntu-latest | ||
needs: ['test'] | ||
needs: ['unix-test', 'windows-test'] | ||
steps: | ||
- name: Download all | ||
uses: actions/[email protected] | ||
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