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23 Open 3 Closed
23 Open 3 Closed
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Issues list

Releasing new versions of the spec
#32 opened Sep 27, 2024 by tomwhite
1
Clarify call_genotype_phased for ploidy=1
#31 opened Sep 5, 2024 by hyanwong
3
Add contig metadata
#30 opened Aug 6, 2024 by jeromekelleher
Add non-redundant header entries as a list of name-value tuples
#29 opened Aug 6, 2024 by jeromekelleher
Add filter_description field
#28 opened Aug 6, 2024 by jeromekelleher
VCF spec 4.4 introduces the 'P' number for ploidy vcf-4.4
#25 opened Jul 1, 2024 by timothymillar
2
VCF-Zarr spec does not support partial phasing following the VCF 4.4 spec vcf-4.4
#24 opened Jul 1, 2024 by timothymillar
3
Index supporting overlap queries
#23 opened May 23, 2024 by jeromekelleher
Recommendations about chunk sizes
#22 opened May 22, 2024 by jeromekelleher
3
Dedicated array for chrom/pos lookup?
#21 opened May 22, 2024 by jeromekelleher
3
Clarify mixed ploidy status in spec
#20 opened May 8, 2024 by jeromekelleher
Filter description not provided
#19 opened May 2, 2024 by jeromekelleher
Reserve the parents dimention
#18 opened Apr 10, 2024 by timothymillar
1
Clarify type of vcf_zarr_version attr
#16 opened Feb 26, 2024 by jeromekelleher
2
Clarify purpose of the vcf_header attribute and/or refine?
#15 opened Feb 26, 2024 by jeromekelleher
3
Change Character dtype to U1?
#14 opened Feb 25, 2024 by jeromekelleher
3
Provide validator script enhancement New feature or request
#13 opened Feb 20, 2024 by jeromekelleher
Clarify status of negative integers in spec bug Something isn't working
#12 opened Feb 20, 2024 by jeromekelleher
5
Clarify missing data status of INFO and FORMAT fields
#11 opened Feb 20, 2024 by jeromekelleher
Add optional top-level attribute for source
#6 opened Mar 28, 2023 by tomwhite
Top-level attribute(s) for assembly information
#4 opened Nov 3, 2022 by jeromekelleher
Add optional top-level attribute for contig lengths
#3 opened Nov 3, 2022 by tomwhite
Add top-level attribute to denote default phased/unphased status
#2 opened Nov 24, 2021 by jeromekelleher
2
ProTip! Exclude everything labeled bug with -label:bug.