From d6a1fdb9242afc6371bcd66a724ebf66d3fb5779 Mon Sep 17 00:00:00 2001 From: willtyler Date: Fri, 18 Oct 2024 14:59:06 +0000 Subject: [PATCH] Add view command on real data --- performance/compare.py | 1 + 1 file changed, 1 insertion(+) diff --git a/performance/compare.py b/performance/compare.py index 3af4680..dd7c3f8 100644 --- a/performance/compare.py +++ b/performance/compare.py @@ -28,6 +28,7 @@ def run_vcztools(command: str, dataset_name: str): if __name__ == "__main__": commands = [ ("view", "sim_10k"), + ("view", "chr22"), ("view -s tsk_7068,tsk_8769,tsk_8820", "sim_10k"), (r"query -f '%CHROM %POS %REF %ALT{0}\n'", "sim_10k"), (r"query -f '%CHROM:%POS\n' -i 'POS=49887394 | POS=50816415'", "sim_10k"),