deploy: c4a1d68

sib-swiss · Aug 6, 2024 · 1731ece · 1731ece
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diff --git a/about.html b/about.html
@@ -31,6 +31,8 @@
 <script src="site_libs/quarto-search/quarto-search.js"></script>
 <meta name="quarto:offset" content="./">
 <link href="./assets/SIB_logo.svg" rel="icon" type="image/svg+xml">
+<script src="site_libs/cookie-consent/cookie-consent.js"></script>
+<link href="site_libs/cookie-consent/cookie-consent.css" rel="stylesheet">
 <script src="site_libs/quarto-html/quarto.js"></script>
 <script src="site_libs/quarto-html/popper.min.js"></script>
 <script src="site_libs/quarto-html/tippy.umd.min.js"></script>
@@ -60,6 +62,31 @@
     "search-label": "Search"
   }
 }</script>
+<script async="" src="https://www.googletagmanager.com/gtag/js?id=G-1H5B39PY7V"></script>
+
+<script type="text/plain" cookie-consent="tracking">
+
+window.dataLayer = window.dataLayer || [];
+function gtag(){dataLayer.push(arguments);}
+gtag('js', new Date());
+gtag('config', 'G-1H5B39PY7V', { 'anonymize_ip': true});
+</script>
+
+<script type="text/javascript" charset="UTF-8">
+document.addEventListener('DOMContentLoaded', function () {
+cookieconsent.run({
+  "notice_banner_type":"simple",
+  "consent_type":"implied",
+  "palette":"light",
+  "language":"en",
+  "page_load_consent_levels":["strictly-necessary","functionality","tracking","targeting"],
+  "notice_banner_reject_button_hide":false,
+  "preferences_center_close_button_hide":false,
+  "website_name":""
+  });
+});
+</script> 
+
 <link rel="stylesheet" href="https://fonts.googleapis.com/css?family=Source+Sans+Pro">
 
 
@@ -461,6 +488,17 @@ <h1 class="title">About</h1>
 });
 </script>
 </div> <!-- /content -->
+<footer class="footer">
+  <div class="nav-footer">
+    <div class="nav-footer-left">
+      &nbsp;
+    </div>   
+    <div class="nav-footer-center"><div class="cookie-consent-footer"><a href="#" id="open_preferences_center">Cookie Preferences</a></div></div>
+    <div class="nav-footer-right">
+      &nbsp;
+    </div>
+  </div>
+</footer>
 
 
 

diff --git a/course_schedule.html b/course_schedule.html
@@ -31,6 +31,8 @@
 <script src="site_libs/quarto-search/quarto-search.js"></script>
 <meta name="quarto:offset" content="./">
 <link href="./assets/SIB_logo.svg" rel="icon" type="image/svg+xml">
+<script src="site_libs/cookie-consent/cookie-consent.js"></script>
+<link href="site_libs/cookie-consent/cookie-consent.css" rel="stylesheet">
 <script src="site_libs/quarto-html/quarto.js"></script>
 <script src="site_libs/quarto-html/popper.min.js"></script>
 <script src="site_libs/quarto-html/tippy.umd.min.js"></script>
@@ -60,6 +62,31 @@
     "search-label": "Search"
   }
 }</script>
+<script async="" src="https://www.googletagmanager.com/gtag/js?id=G-1H5B39PY7V"></script>
+
+<script type="text/plain" cookie-consent="tracking">
+
+window.dataLayer = window.dataLayer || [];
+function gtag(){dataLayer.push(arguments);}
+gtag('js', new Date());
+gtag('config', 'G-1H5B39PY7V', { 'anonymize_ip': true});
+</script>
+
+<script type="text/javascript" charset="UTF-8">
+document.addEventListener('DOMContentLoaded', function () {
+cookieconsent.run({
+  "notice_banner_type":"simple",
+  "consent_type":"implied",
+  "palette":"light",
+  "language":"en",
+  "page_load_consent_levels":["strictly-necessary","functionality","tracking","targeting"],
+  "notice_banner_reject_button_hide":false,
+  "preferences_center_close_button_hide":false,
+  "website_name":""
+  });
+});
+</script> 
+
 <link rel="stylesheet" href="https://fonts.googleapis.com/css?family=Source+Sans+Pro">
 
 
@@ -658,6 +685,17 @@ <h2 class="anchored" data-anchor-id="day-3">Day 3</h2>
 });
 </script>
 </div> <!-- /content -->
+<footer class="footer">
+  <div class="nav-footer">
+    <div class="nav-footer-left">
+      &nbsp;
+    </div>   
+    <div class="nav-footer-center"><div class="cookie-consent-footer"><a href="#" id="open_preferences_center">Cookie Preferences</a></div></div>
+    <div class="nav-footer-right">
+      &nbsp;
+    </div>
+  </div>
+</footer>
 
 
 

diff --git a/day1/day1-1_setup.html b/day1/day1-1_setup.html
diff --git a/day1/day1-1a_cellranger.html b/day1/day1-1a_cellranger.html
diff --git a/day1/day1-2_analysis_tools_qc.html b/day1/day1-2_analysis_tools_qc.html
diff --git a/day1/day1-3_normalization_scaling.html b/day1/day1-3_normalization_scaling.html
@@ -61,6 +61,8 @@
 <script src="../site_libs/quarto-search/quarto-search.js"></script>
 <meta name="quarto:offset" content="../">
 <link href="../assets/SIB_logo.svg" rel="icon" type="image/svg+xml">
+<script src="../site_libs/cookie-consent/cookie-consent.js"></script>
+<link href="../site_libs/cookie-consent/cookie-consent.css" rel="stylesheet">
 <script src="../site_libs/quarto-html/quarto.js"></script>
 <script src="../site_libs/quarto-html/popper.min.js"></script>
 <script src="../site_libs/quarto-html/tippy.umd.min.js"></script>
@@ -88,7 +90,26 @@
     "search-submit-button-title": "Submit",
     "search-label": "Search"
   }
-}</script><link rel="stylesheet" href="https://fonts.googleapis.com/css?family=Source+Sans+Pro">
+}</script><script async="" src="https://www.googletagmanager.com/gtag/js?id=G-1H5B39PY7V"></script><script type="text/plain" cookie-consent="tracking">
+
+window.dataLayer = window.dataLayer || [];
+function gtag(){dataLayer.push(arguments);}
+gtag('js', new Date());
+gtag('config', 'G-1H5B39PY7V', { 'anonymize_ip': true});
+</script><script type="text/javascript" charset="UTF-8">
+document.addEventListener('DOMContentLoaded', function () {
+cookieconsent.run({
+  "notice_banner_type":"simple",
+  "consent_type":"implied",
+  "palette":"light",
+  "language":"en",
+  "page_load_consent_levels":["strictly-necessary","functionality","tracking","targeting"],
+  "notice_banner_reject_button_hide":false,
+  "preferences_center_close_button_hide":false,
+  "website_name":""
+  });
+});
+</script><link rel="stylesheet" href="https://fonts.googleapis.com/css?family=Source+Sans+Pro">
 </head>
 <body class="nav-sidebar floating nav-fixed">
 
@@ -770,7 +791,16 @@ <h1 class="title">Normalization and scaling</h1>
 });
 </script>
 </div> <!-- /content -->
-
+<footer class="footer"><div class="nav-footer">
+    <div class="nav-footer-left">
+      &nbsp;
+    </div>   
+    <div class="nav-footer-center"><div class="cookie-consent-footer"><a href="#" id="open_preferences_center">Cookie Preferences</a></div></div>
+    <div class="nav-footer-right">
+      &nbsp;
+    </div>
+  </div>
+</footer>
 
 
 </body></html>
diff --git a/day2/day2-1_dimensionality_reduction.html b/day2/day2-1_dimensionality_reduction.html
diff --git a/day2/day2-2_integration.html b/day2/day2-2_integration.html
@@ -61,6 +61,8 @@
 <script src="../site_libs/quarto-search/quarto-search.js"></script>
 <meta name="quarto:offset" content="../">
 <link href="../assets/SIB_logo.svg" rel="icon" type="image/svg+xml">
+<script src="../site_libs/cookie-consent/cookie-consent.js"></script>
+<link href="../site_libs/cookie-consent/cookie-consent.css" rel="stylesheet">
 <script src="../site_libs/quarto-html/quarto.js"></script>
 <script src="../site_libs/quarto-html/popper.min.js"></script>
 <script src="../site_libs/quarto-html/tippy.umd.min.js"></script>
@@ -88,7 +90,26 @@
     "search-submit-button-title": "Submit",
     "search-label": "Search"
   }
-}</script><link rel="stylesheet" href="https://fonts.googleapis.com/css?family=Source+Sans+Pro">
+}</script><script async="" src="https://www.googletagmanager.com/gtag/js?id=G-1H5B39PY7V"></script><script type="text/plain" cookie-consent="tracking">
+
+window.dataLayer = window.dataLayer || [];
+function gtag(){dataLayer.push(arguments);}
+gtag('js', new Date());
+gtag('config', 'G-1H5B39PY7V', { 'anonymize_ip': true});
+</script><script type="text/javascript" charset="UTF-8">
+document.addEventListener('DOMContentLoaded', function () {
+cookieconsent.run({
+  "notice_banner_type":"simple",
+  "consent_type":"implied",
+  "palette":"light",
+  "language":"en",
+  "page_load_consent_levels":["strictly-necessary","functionality","tracking","targeting"],
+  "notice_banner_reject_button_hide":false,
+  "preferences_center_close_button_hide":false,
+  "website_name":""
+  });
+});
+</script><link rel="stylesheet" href="https://fonts.googleapis.com/css?family=Source+Sans+Pro">
 </head>
 <body class="nav-sidebar floating nav-fixed">
 
@@ -550,7 +571,16 @@ <h1 class="title">Integration</h1>
 });
 </script>
 </div> <!-- /content -->
-
+<footer class="footer"><div class="nav-footer">
+    <div class="nav-footer-left">
+      &nbsp;
+    </div>   
+    <div class="nav-footer-center"><div class="cookie-consent-footer"><a href="#" id="open_preferences_center">Cookie Preferences</a></div></div>
+    <div class="nav-footer-right">
+      &nbsp;
+    </div>
+  </div>
+</footer>
 
 
 </body></html>
diff --git a/day2/day2-3_clustering.html b/day2/day2-3_clustering.html
diff --git a/day2/day2-4_cell_annotation.html b/day2/day2-4_cell_annotation.html
diff --git a/day3/day3-1_differential_gene_expression.html b/day3/day3-1_differential_gene_expression.html
diff --git a/day3/day3-2_enrichment_analysis.html b/day3/day3-2_enrichment_analysis.html
@@ -61,6 +61,8 @@
 <script src="../site_libs/quarto-search/quarto-search.js"></script>
 <meta name="quarto:offset" content="../">
 <link href="../assets/SIB_logo.svg" rel="icon" type="image/svg+xml">
+<script src="../site_libs/cookie-consent/cookie-consent.js"></script>
+<link href="../site_libs/cookie-consent/cookie-consent.css" rel="stylesheet">
 <script src="../site_libs/quarto-html/quarto.js"></script>
 <script src="../site_libs/quarto-html/popper.min.js"></script>
 <script src="../site_libs/quarto-html/tippy.umd.min.js"></script>
@@ -88,7 +90,26 @@
     "search-submit-button-title": "Submit",
     "search-label": "Search"
   }
-}</script><link rel="stylesheet" href="https://fonts.googleapis.com/css?family=Source+Sans+Pro">
+}</script><script async="" src="https://www.googletagmanager.com/gtag/js?id=G-1H5B39PY7V"></script><script type="text/plain" cookie-consent="tracking">
+
+window.dataLayer = window.dataLayer || [];
+function gtag(){dataLayer.push(arguments);}
+gtag('js', new Date());
+gtag('config', 'G-1H5B39PY7V', { 'anonymize_ip': true});
+</script><script type="text/javascript" charset="UTF-8">
+document.addEventListener('DOMContentLoaded', function () {
+cookieconsent.run({
+  "notice_banner_type":"simple",
+  "consent_type":"implied",
+  "palette":"light",
+  "language":"en",
+  "page_load_consent_levels":["strictly-necessary","functionality","tracking","targeting"],
+  "notice_banner_reject_button_hide":false,
+  "preferences_center_close_button_hide":false,
+  "website_name":""
+  });
+});
+</script><link rel="stylesheet" href="https://fonts.googleapis.com/css?family=Source+Sans+Pro">
 </head>
 <body class="nav-sidebar floating nav-fixed">
 
@@ -845,7 +866,16 @@ <h1 class="title">Enrichment analysis</h1>
 });
 </script>
 </div> <!-- /content -->
-
+<footer class="footer"><div class="nav-footer">
+    <div class="nav-footer-left">
+      &nbsp;
+    </div>   
+    <div class="nav-footer-center"><div class="cookie-consent-footer"><a href="#" id="open_preferences_center">Cookie Preferences</a></div></div>
+    <div class="nav-footer-right">
+      &nbsp;
+    </div>
+  </div>
+</footer>
 
 
 </body></html>
diff --git a/day3/day3-3_trajectory_analysis.html b/day3/day3-3_trajectory_analysis.html
diff --git a/day3/day3-4_advanced_analyses.html b/day3/day3-4_advanced_analyses.html
diff --git a/index.html b/index.html
@@ -31,6 +31,8 @@
 <script src="site_libs/quarto-search/quarto-search.js"></script>
 <meta name="quarto:offset" content="./">
 <link href="./assets/SIB_logo.svg" rel="icon" type="image/svg+xml">
+<script src="site_libs/cookie-consent/cookie-consent.js"></script>
+<link href="site_libs/cookie-consent/cookie-consent.css" rel="stylesheet">
 <script src="site_libs/quarto-html/quarto.js"></script>
 <script src="site_libs/quarto-html/popper.min.js"></script>
 <script src="site_libs/quarto-html/tippy.umd.min.js"></script>
@@ -60,6 +62,31 @@
     "search-label": "Search"
   }
 }</script>
+<script async="" src="https://www.googletagmanager.com/gtag/js?id=G-1H5B39PY7V"></script>
+
+<script type="text/plain" cookie-consent="tracking">
+
+window.dataLayer = window.dataLayer || [];
+function gtag(){dataLayer.push(arguments);}
+gtag('js', new Date());
+gtag('config', 'G-1H5B39PY7V', { 'anonymize_ip': true});
+</script>
+
+<script type="text/javascript" charset="UTF-8">
+document.addEventListener('DOMContentLoaded', function () {
+cookieconsent.run({
+  "notice_banner_type":"simple",
+  "consent_type":"implied",
+  "palette":"light",
+  "language":"en",
+  "page_load_consent_levels":["strictly-necessary","functionality","tracking","targeting"],
+  "notice_banner_reject_button_hide":false,
+  "preferences_center_close_button_hide":false,
+  "website_name":""
+  });
+});
+</script> 
+
 <link rel="stylesheet" href="https://fonts.googleapis.com/css?family=Source+Sans+Pro">
 
 
@@ -546,6 +573,17 @@ <h3 class="anchored" data-anchor-id="exercises">Exercises</h3>
 });
 </script>
 </div> <!-- /content -->
+<footer class="footer">
+  <div class="nav-footer">
+    <div class="nav-footer-left">
+      &nbsp;
+    </div>   
+    <div class="nav-footer-center"><div class="cookie-consent-footer"><a href="#" id="open_preferences_center">Cookie Preferences</a></div></div>
+    <div class="nav-footer-right">
+      &nbsp;
+    </div>
+  </div>
+</footer>