diff --git a/.bumpversion.toml b/.bumpversion.toml
index c592ed1a..5d83ac4c 100644
--- a/.bumpversion.toml
+++ b/.bumpversion.toml
@@ -1,5 +1,5 @@
 [tool.bumpversion]
-current_version = "2.1.2.9000"
+current_version = "2.1.2.9001"
 search = "{current_version}"
 replace = "{new_version}"
 message = "Bump version: {current_version} → {new_version}"
diff --git a/.github/workflows/build_conda_recipes.yaml b/.github/workflows/build_conda_recipes.yaml
index 452d70e6..4d742e23 100644
--- a/.github/workflows/build_conda_recipes.yaml
+++ b/.github/workflows/build_conda_recipes.yaml
@@ -11,7 +11,7 @@ env:
   recipe_path: conda/recipe
   env_yml_path: conda/env/yml
   env_lock_path: conda/env/lock
-  VERSION: '2.1.2.9000' # versioned by bump2version
+  VERSION: '2.1.2.9001' # versioned by bump2version
 jobs:
   build_pcgrr_conda_pkg:
     # When merging to one of the branches above and the commit message matches
diff --git a/conda/env/yml/pcgr.yml b/conda/env/yml/pcgr.yml
index a8b003f3..1d195d8b 100644
--- a/conda/env/yml/pcgr.yml
+++ b/conda/env/yml/pcgr.yml
@@ -6,7 +6,7 @@ channels:
   - conda-forge
 
 dependencies:
-  - pcgr::pcgr ==2.1.2.9000 # versioned by bump2version
+  - pcgr::pcgr ==2.1.2.9001 # versioned by bump2version
   - bedtools
   - bcftools
   - cyvcf2
diff --git a/conda/env/yml/pcgrr.yml b/conda/env/yml/pcgrr.yml
index f1b81f76..e62aa255 100644
--- a/conda/env/yml/pcgrr.yml
+++ b/conda/env/yml/pcgrr.yml
@@ -7,7 +7,7 @@ channels:
 
 dependencies:
   - python
-  - pcgr::r-pcgrr ==2.1.2.9000 # versioned by bump2version
+  - pcgr::r-pcgrr ==2.1.2.9001 # versioned by bump2version
   - pcgr::r-cpsr
   - r-argparse
   - bioconductor-bsgenome.hsapiens.ucsc.hg38
diff --git a/conda/env/yml/pkgdown.yml b/conda/env/yml/pkgdown.yml
index d12d6fd1..ef37b1b8 100644
--- a/conda/env/yml/pkgdown.yml
+++ b/conda/env/yml/pkgdown.yml
@@ -4,7 +4,7 @@ channels:
   - bioconda
   - conda-forge
 dependencies:
-  - pcgr::r-pcgrr ==2.1.2.9000 # versioned by bump2version
+  - pcgr::r-pcgrr ==2.1.2.9001 # versioned by bump2version
   - r-pkgdown
   - r-readr
   - r-glue
diff --git a/conda/recipe/pcgr/meta.yaml b/conda/recipe/pcgr/meta.yaml
index 3a47d811..aaacfd9a 100644
--- a/conda/recipe/pcgr/meta.yaml
+++ b/conda/recipe/pcgr/meta.yaml
@@ -1,6 +1,6 @@
 package:
   name: pcgr
-  version: 2.1.2.9000 # versioned by bump2version
+  version: 2.1.2.9001 # versioned by bump2version
 
 source:
   path: ../../..
diff --git a/conda/recipe/pcgrr/meta.yaml b/conda/recipe/pcgrr/meta.yaml
index d8a56855..b50f6bc4 100644
--- a/conda/recipe/pcgrr/meta.yaml
+++ b/conda/recipe/pcgrr/meta.yaml
@@ -1,6 +1,6 @@
 package:
   name: r-pcgrr
-  version: 2.1.2.9000 # versioned by bump2version
+  version: 2.1.2.9001 # versioned by bump2version
 
 source:
   path: ../../../pcgrr
diff --git a/pcgr/_version.py b/pcgr/_version.py
index c91626e1..13eddf3d 100644
--- a/pcgr/_version.py
+++ b/pcgr/_version.py
@@ -1,2 +1,2 @@
 # versioned by bump2version
-__version__ = '2.1.2.9000'
+__version__ = '2.1.2.9001'
diff --git a/pcgrr/DESCRIPTION b/pcgrr/DESCRIPTION
index a278ac97..11aeb1b6 100644
--- a/pcgrr/DESCRIPTION
+++ b/pcgrr/DESCRIPTION
@@ -1,7 +1,7 @@
 Package: pcgrr
 Type: Package
 Title: Personal Cancer Genome ReporteR
-Version: 2.1.2.9000
+Version: 2.1.2.9001
 Authors@R:
     c(person(given = "Sigve",
              family = "Nakken",
diff --git a/pcgrr/vignettes/installation.Rmd b/pcgrr/vignettes/installation.Rmd
index fc78f84d..b7af5f2d 100644
--- a/pcgrr/vignettes/installation.Rmd
+++ b/pcgrr/vignettes/installation.Rmd
@@ -15,7 +15,7 @@ require(glue, include.only = "glue")
 
 ```{r vars, echo=FALSE}
 Sys.setenv(VEP_VERSION = "112")
-Sys.setenv(PCGR_VERSION = "2.1.2.9000")
+Sys.setenv(PCGR_VERSION = "2.1.2.9001")
 Sys.setenv(BUNDLE_VERSION = "20240927")
 VEP_VERSION <- Sys.getenv("VEP_VERSION")
 PCGR_VERSION <- Sys.getenv("PCGR_VERSION")
diff --git a/pyproject.toml b/pyproject.toml
index 35b87810..d1675b30 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -5,7 +5,7 @@ build-backend = "setuptools.build_meta"
 
 [project]
 name = "pcgr"
-version = "2.1.2.9000" # versioned by bump2version
+version = "2.1.2.9001" # versioned by bump2version
 description = "Personal Cancer Genome Reporter (PCGR) - variant interpretation for precision cancer medicine"
 authors = [
     {name = "Sigve Nakken", email = "sigven@gmail.com"},