ci.yaml

name: CI
on:
  pull_request:
  push:
    branches:
      - main

# The goal here is to cancel older workflows when a PR is updated (because it's pointless work)
concurrency:
  group: ${{ github.workflow }}-${{ github.head_ref || github.ref_name }}
  cancel-in-progress: true

jobs:
  unittest:
    name: unit tests
    runs-on: ubuntu-latest
    strategy:
      matrix:
        python-version: ["3.8", "3.9", "3.10", "3.11", "3.12"]

    steps:
      - uses: actions/checkout@v4

      - name: Set up Python ${{ matrix.python-version }}
        uses: actions/setup-python@v5
        with:
          python-version: ${{ matrix.python-version }}
          cache: pip

      - name: Install dependencies
        run: |
          python -m pip install --upgrade pip
          pip install -r requirements.txt
          pip install pytest pytest-cov

      - name: Test with pytest
        run: |
          python -m pytest --cov=fhirclient --cov-report=xml

      - name: Log missing coverage
        run: |
          coverage report -m --skip-covered

# Disable coverage checking until there is a secure fix for:
# https://github.com/orgoro/coverage/issues/259
#      - name: Check coverage report
#        if: github.ref != 'refs/heads/main'
#        uses: orgoro/coverage@v3.2
#        with:
#          coverageFile: coverage.xml
#          token: ${{ secrets.GITHUB_TOKEN }}
#          thresholdAll: .45
#          thresholdNew: 1
#          thresholdModified: .40