fixed cython interface

Author: gjkennedy

Makefile

@@ -13,7 +13,7 @@ default:
 	    echo "making $@ in $$subdir"; \
 	    echo; (cd $$subdir && $(MAKE) TMR_DIR=${TMR_DIR}) || exit 1; \
 	done
-	${CXX} ${SO_LINK_FLAGS} ${TMR_OBJS} ${TMR_EXTERN_LIBS} -o ${TMR_DIR}/lib/libtmr.${SO_EXT} 
+	${CXX} ${SO_LINK_FLAGS} ${TMR_OBJS} ${TMR_EXTERN_LIBS} -o ${TMR_DIR}/lib/libtmr.${SO_EXT}
 
 debug:
 	echo "Building Real TMR"
@@ -24,7 +24,7 @@ debug:
 	${CXX} ${SO_LINK_FLAGS} ${TMR_OBJS} ${TMR_EXTERN_LIBS} -o ${TMR_DIR}/lib/libtmr.${SO_EXT}
 
 interface:
-	${PYTHON} setup.py build_ext --inplace
+	pip install -e .\[all\]
 
 clean:
 	${RM} lib/*.a lib/*.so

setup.py

@@ -2,17 +2,16 @@
 from subprocess import check_output
 import sys
 
-# Numpy/mpi4py must be installed prior to installing TACS
+# Numpy/mpi4py must be installed prior to installing
 import numpy
 import mpi4py
 
 # Import distutils
-from setuptools import setup
+from setuptools import setup, find_packages
 from distutils.core import Extension as Ext
 from Cython.Build import cythonize
 from Cython.Compiler import Options
 
-Options.embedsignature = True
 Options.docstrings = True
 
 
@@ -127,16 +126,16 @@ def get_mpi_flags():
 
 for e in exts:
     e.cython_directives = {
-        "language_level": "3",
         "embedsignature": True,
         "binding": True,
     }
 
 setup(
     name="tmr",
-    version=0.1,
+    version=1.0,
     description="Parallel mesh generation utilities",
     author="Graeme J. Kennedy",
     author_email="[email protected]",
+    packages=find_packages(include=["tmr*"]),
     ext_modules=cythonize(exts, include_path=inc_dirs),
 )