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Releases: snakemake-workflows/dna-seq-varlociraptor

v5.8.1

17 Jul 07:17
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5.8.1 (2024-07-17)

Bug Fixes

  • always use the same type for label list in datavzrd config (#312) (9d20f50)
  • fix typo in description of variant calls tables (9d02274)
  • minor fixes (#311) (a96e071)

v5.8.0

02 Jul 07:33
44552fd
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5.8.0 (2024-07-01)

Features

Bug Fixes

v5.7.0

07 Jun 08:47
940439e
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5.7.0 (2024-06-07)

Features

  • Add improved visualization for clinical significance (#301) (82eb4dd)
  • add linkouts to non-coding tables (#302) (15ce609)
  • support selecting the fdr control mode via the config (#306) (ac27206)

Bug Fixes

v5.6.0

04 May 06:48
f558487
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5.6.0 (2024-05-04)

Features

Bug Fixes

  • fusion candidate filtering (#299) (6cc658a)
  • use latest datavzrd wrapper that integrates template rendering (#300) (0ad923f)

v5.5.0

10 Apr 10:15
246e186
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5.5.0 (2024-04-09)

Features

  • add ability to store variants in a population database (BCF) (#288) (e52c29b)
  • add alphamissense linkout (#294) (a775627)

v5.4.1

28 Mar 12:57
d9ac7b6
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5.4.1 (2024-03-28)

Bug Fixes

  • use latest wrapper for obtaining known variants (#292) (1268dd9)

v5.4.0

25 Mar 15:48
a8ff5e8
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5.4.0 (2024-03-23)

Features

Bug Fixes

v5.3.1

13 Mar 10:07
bca26e2
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5.3.1 (2024-03-12)

Bug Fixes

  • avoid piping if there is no glob pattern in the given fastqs (#286) (645e5c0)
  • require Snakemake 8 (#284) (9a19971)

v5.3.0

01 Mar 11:49
c8b6026
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5.3.0 (2024-02-27)

Features

Performance Improvements

  • reorganize tests to first only do dry-runs and then run long and short tests in one runner each (#280) (ee973c6)

v5.2.0

01 Dec 09:06
526c4ce
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5.2.0 (2023-11-30)

Features

  • colored tick plots in datavzrd report (#279) (757aa0e)
  • improve and run sra download ci test case (#276) (074661e)
  • map primers by bwa and update datavzrd template (#275) (12f22e9)

Bug Fixes

  • unique values when extracting samples column for repeated samples (in multiple groups) (#278) (aaac1b5)