.gitlab-ci.yml

image: ubuntu:18.04

before_script:
  - apt-get update -qq &> /dev/null
  - apt-get install -qq -y apt-utils wget git build-essential &> /dev/null
  - dpkg --configure -a &> /dev/null
  - apt-get -f install -qq -y &> /dev/null
  - apt-get install -qq -y gfortran &> /dev/null
  - apt-get install -qq -y mpich libmpich-dev &> /dev/null
  - apt-get install -qq -y libgsl0-dbg libgsl0-dev &> /dev/null
  - mkdir -p /usr/local/hdf5-parallel
  - wget --quiet https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-1.8/hdf5-1.8.21/src/hdf5-1.8.21.tar.gz
  - tar -xzf hdf5-1.8.21.tar.gz
  - cd hdf5-1.8.21
  - FC=mpif90 CC=mpicc ./configure --enable-parallel --enable-fortran --prefix=/usr/local/hdf5-parallel > /dev/null
  - make -sj &> /dev/null
  - make -s install &> /dev/null
  - cd ..
  - export CC=/usr/local/hdf5-parallel/bin/h5pcc
  - export FC=/usr/local/hdf5-parallel/bin/h5pfc
  - wget --quiet https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh
  - bash Miniconda3-latest-Linux-x86_64.sh -b -p /usr/local/miniconda3 &> /dev/null
  - /usr/local/miniconda3/bin/conda install --yes --quiet numpy scipy h5py matplotlib pip psutil &> /dev/null
  - mkdir -p /usr/local/bin
  - ln -s /usr/local/miniconda3/bin/python /usr/local/bin/python
  - export PATH=/usr/local/bin:${PATH}
  - mkdir -p ${HOME}/.config/matplotlib
  - cp script/dependencies/matplotlibrc ${HOME}/.config/matplotlib

test_env:
  only:
    - schedules
  script:
    - whoami
    - pwd
    - echo "Testing environment"
    - echo "Python version"
    - python --version
    - python -c "import h5py; print(h5py.__version__)"
    - python -c "import numpy; print(numpy.__version__)"
    - python -c "import scipy; print(scipy.__version__)"
    - python -c "import psutil; print(psutil.__version__)"
    - echo "OS version"
    - uname -a
    - echo "RAM"
    - free -mh
    - echo "Number of processors"
    - grep -c ^processor /proc/cpuinfo
    - echo "Compiler"
    - gcc --version
    - echo "GSL"
    - gsl-config --version
    - gsl-config --libs
    - echo "MPI"
    - mpirun -np 2 echo "hello world"
    - mpicc -show
    - mpif90 -show
    - which mpirun
    - echo "HDF5"
    - echo ${CC}
    - ${CC} -show
    - echo ${FC}
    - ${FC} -show
    - echo "Current directory"
    - pwd
    - echo "directory contains"
    - ls -a

test_fast:
  except:
    - schedules
  script:
    - cd test
    - python test_all.py -fast

test_full:
  only:
    - schedules
  script:
    - cd test
    - python test_all.py