Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

NGFF axes order and _ARRAY_DIMENSIONS order don't match #41

Open
PaulHax opened this issue May 13, 2022 · 1 comment
Open

NGFF axes order and _ARRAY_DIMENSIONS order don't match #41

PaulHax opened this issue May 13, 2022 · 1 comment

Comments

@PaulHax
Copy link
Contributor

PaulHax commented May 13, 2022 •
edited
Loading

The order of the axes entry in the topLevel .zattrs does not match the shape of the chunks. _ARRAY_DIMENSIONS order does match the chunk shape. Expecting the order of axes and _ARRAY_DIMENSIONS to match.

@thewtex

Also see that direction is adjacent to _ARRAY_DIMENSIONS. Not all NGFF datasets i've seen have array level .zattrs, resulting in 404s for Kitware/itk-vtk-viewer#480. Maybe duplicate direction/range/etc in top level .zattrs?
@PaulHax PaulHax mentioned this issue May 19, 2022
Merged
@thewtex
Copy link
Contributor

thewtex commented Sep 15, 2022

Ongoing standardization and developments in NGFF should resolve these issues.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
2 participants
@thewtex @PaulHax