diff --git a/.github/DOCS.md b/.github/DOCS.md index c740c32..1350254 100644 --- a/.github/DOCS.md +++ b/.github/DOCS.md @@ -2,25 +2,25 @@ In this folder there is configuration for codecoverage, dependabot and ci workflows. -This folder can be merged using a `--allow-unrelated-histories` merge strategy from which provides a reasonably sensible base for writing your own ci on. By using this strategy the history of the CI repo is included in your repo, and future updates to the CI can be merged later. +This folder can be merged using a `--allow-unrelated-histories` merge strategy from which provides a reasonably sensible base for writing your own ci on. By using this strategy the history of the CI repo is included in your repo, and future updates to the CI can be merged later. The workflows in this folder requires a root Makefile with a couple of targets defined. -As base can the Makefile in be used. +As base can the Makefile in be used. ## Publish -The `publish`-step in [test.yml](./workflows/test.yml) is configured to use the GitHub environment `release`, create that or change to your preferred environment. +The `publish`-step in [release.yml](./workflows/release.yml) is configured to use the GitHub environment `release`, create that or change to your preferred environment. To publish to PyPI you must also configure your Pypi-project settings to use Trusted Publisher Management, by setting repo, workflow and environment on PyPI. To perform this merge run: ```shell -git remote add ci git@github.com:spraakbanken/python-pdm-ci-conf.git +git remote add ci git@github.com:spraakbanken/python-uv-ci-conf.git git fetch ci git merge --allow-unrelated-histories ci/main ``` -or add the remote as `git remote add ci https://github.com/spraakbanken/python-pdm-ci-conf.git` +or add the remote as `git remote add ci https://github.com/spraakbanken/python-uv-ci-conf.git` To later merge updates to this repo, just run: diff --git a/.github/workflows/check.yml b/.github/workflows/check.yml index c11b683..c676a96 100644 --- a/.github/workflows/check.yml +++ b/.github/workflows/check.yml @@ -11,7 +11,8 @@ permissions: contents: read env: - MINIMUM_PYTHON_VERSION: "3.8" + MINIMUM_PYTHON_VERSION: "3.9" + UV_VERSION: "0.5.1" # If new code is pushed to a PR branch, then cancel in progress workflows for that PR. Ensures that # we don't waste CI time, and returns results quicker https://github.com/jonhoo/rust-ci-conf/pull/5 @@ -22,82 +23,117 @@ concurrency: jobs: fmt: runs-on: ubuntu-latest - name: ubuntu / 3.8 / fmt + name: ubuntu / 3.9 / fmt steps: - uses: actions/checkout@v4 with: submodules: true - name: Set up the python ${{ env.MINIMUM_PYTHON_VERSION }} - uses: pdm-project/setup-pdm@v4 + uses: actions/setup-python@v5 id: setup-python with: python-version: ${{ env.MINIMUM_PYTHON_VERSION }} - + + #---------------------------------------------- + # ----- setup uv and load cache ----- + #---------------------------------------------- + - name: Set up uv + uses: astral-sh/setup-uv@v3 + with: + version: ${{ env.UV_VERSION }} + enable-cache: true + - name: Load cached venv id: cached-venv uses: actions/cache@v4 with: path: .venv - key: venv-${{ runner.os }}-${{ steps.setup-python.outputs.python-version }}-${{ hashFiles('**/pyproject.toml') }}-${{ hashFiles('.github/workflows/check.yml') }} - + key: venv-${{ runner.os }}-${{ steps.setup-python.outputs.python-version }}-${{ hashFiles('**/pyproject.toml') }}-${{ hashFiles('**/uv.lock') }} + - name: Install dependencies if: steps.cached-venv.outputs.cache-hit != 'true' run: make install-dev - + - name: check formatting run: make check-fmt + lint: runs-on: ubuntu-latest - name: ubuntu / 3.8 / lint + name: ubuntu / 3.9 / lint steps: - uses: actions/checkout@v4 with: submodules: true - name: Set up the python ${{ env.MINIMUM_PYTHON_VERSION }} - uses: pdm-project/setup-pdm@v4 + uses: actions/setup-python@v5 id: setup-python with: python-version: ${{ env.MINIMUM_PYTHON_VERSION }} + + #---------------------------------------------- + # ----- setup uv and load cache ----- + #---------------------------------------------- + - name: Set up uv + uses: astral-sh/setup-uv@v3 + with: + version: ${{ env.UV_VERSION }} + enable-cache: true + - name: Load cached venv id: cached-venv uses: actions/cache@v4 with: path: .venv - key: venv-${{ runner.os }}-${{ steps.setup-python.outputs.python-version }}-${{ hashFiles('**/pyproject.toml') }}-${{ hashFiles('.github/workflows/check.yml') }} + key: venv-${{ runner.os }}-${{ steps.setup-python.outputs.python-version }}-${{ hashFiles('**/pyproject.toml') }}-${{ hashFiles('**/uv.lock') }} + - name: Install dependencies if: steps.cached-venv.outputs.cache-hit != 'true' run: make install-dev + - name: lint code run: make lint + type-check: runs-on: ubuntu-latest - name: ubuntu / 3.8 / type-check + name: ubuntu / 3.9 / type-check steps: - uses: actions/checkout@v4 with: submodules: true - name: Set up the python ${{ env.MINIMUM_PYTHON_VERSION }} - uses: pdm-project/setup-pdm@v4 + uses: actions/setup-python@v5 id: setup-python with: python-version: ${{ env.MINIMUM_PYTHON_VERSION }} + + #---------------------------------------------- + # ----- setup uv and load cache ----- + #---------------------------------------------- + - name: Set up uv + uses: astral-sh/setup-uv@v3 + with: + version: ${{ env.UV_VERSION }} + enable-cache: true + - name: Load cached venv id: cached-venv uses: actions/cache@v4 with: path: .venv - key: venv-${{ runner.os }}-${{ steps.setup-python.outputs.python-version }}-${{ hashFiles('**/pyproject.toml') }}-${{ hashFiles('.github/workflows/check.yml') }} + key: venv-${{ runner.os }}-${{ steps.setup-python.outputs.python-version }}-${{ hashFiles('**/pyproject.toml') }}-${{ hashFiles('**/uv.lock') }} + - name: Install dependencies if: steps.cached-venv.outputs.cache-hit != 'true' run: make install-dev + - name: type-check code run: make type-check # https://github.com/marketplace/actions/alls-green#why used for branch protection checks check-check: if: always() - needs: + needs: - fmt - lint - type-check diff --git a/.github/workflows/release-viklofg-sweocr.yml b/.github/workflows/release-viklofg-sweocr.yml index 462e89f..d056f87 100644 --- a/.github/workflows/release-viklofg-sweocr.yml +++ b/.github/workflows/release-viklofg-sweocr.yml @@ -5,7 +5,7 @@ on: branches: - main tags: - - 'ocr-correction-viklofg-sweocr-v[0-9]+.[0-9]+.[0-9]+' + - "ocr-correction-viklofg-sweocr-v[0-9]+.[0-9]+.[0-9]+" pull_request: merge_group: @@ -16,13 +16,14 @@ permissions: contents: read env: - MINIMUM_PYTHON_VERSION: "3.8" + MINIMUM_PYTHON_VERSION: "3.9" + UV_VERSION: "0.5.1" jobs: build: # This action builds distribution files for upload to PyPI - name: ubuntu / 3.8 / build + name: ubuntu / 3.9 / build runs-on: ubuntu-latest steps: #---------------------------------------------- @@ -32,16 +33,25 @@ jobs: uses: actions/checkout@v4 with: submodules: true - + #---------------------------------------------- # ----- setup python ----- #---------------------------------------------- - name: Set up the environment - uses: pdm-project/setup-pdm@v4 + uses: actions/setup-python@v5 id: setup-python with: python-version: ${{ env.MINIMUM_PYTHON_VERSION }} - + + #---------------------------------------------- + # ----- setup uv and load cache ----- + #---------------------------------------------- + - name: Set up uv + uses: astral-sh/setup-uv@v3 + with: + version: ${{ env.UV_VERSION }} + enable-cache: true + #---------------------------------------------- # ----- build distribution ----- #---------------------------------------------- @@ -60,14 +70,16 @@ jobs: # This action runs the test suite on the built artifact in the `build` action. # The default is to run this in ubuntu, macos and windows - name: ${{ matrix.os }} / 3.8 / test built artifact + name: ${{ matrix.os }} / 3.9 / test built artifact needs: [build] strategy: fail-fast: false matrix: - os: + os: - ubuntu + - macos + - windows runs-on: ${{ matrix.os }}-latest steps: @@ -91,11 +103,11 @@ jobs: - run: pip install -r ocr-correction-viklofg-sweocr/tests/requirements-testing.lock - run: pip install sparv-sbx-ocr-correction-viklofg-sweocr --no-index --no-deps --find-links dist --force-reinstall - run: pytest ocr-correction-viklofg-sweocr/tests - + # https://github.com/marketplace/actions/alls-green#why used for branch protection checks release-check: if: always() - needs: + needs: - build - test-build runs-on: ubuntu-latest @@ -108,9 +120,9 @@ jobs: # allowed-failures: coverage publish: - # This action publishes the built and tested artifact to PyPI, but only on a tag + # This action publishes the built and tested artifact to PyPI, but only on a tag - needs: + needs: - test-build if: success() && startsWith(github.ref, 'refs/tags/ocr-correction-viklofg-sweocr-v') runs-on: ubuntu-latest diff --git a/.github/workflows/scheduled.yml b/.github/workflows/scheduled.yml index df4f7a9..ab75168 100644 --- a/.github/workflows/scheduled.yml +++ b/.github/workflows/scheduled.yml @@ -9,7 +9,7 @@ on: branches: [main] pull_request: schedule: - - cron: '7 7 * * *' + - cron: "7 7 * * *" concurrency: group: ${{ github.workflow }}-${{ github.head_ref || github.run_id }} @@ -17,60 +17,76 @@ concurrency: name: rolling +env: + UV_VERSION: "0.5.1" + jobs: # https://twitter.com/mycoliza/status/1571295690063753218 nightly: runs-on: ubuntu-latest - name: ubuntu / 3.13-dev - continue-on-error: true # allow failure until py3.8 is dropped + name: ubuntu / 3.14-dev steps: - uses: actions/checkout@v4 with: submodules: true - - name: Install pdm - uses: pdm-project/setup-pdm@v4 + + - name: Set up uv + uses: astral-sh/setup-uv@v3 with: - python-version: "3.11" + version: ${{ env.UV_VERSION }} + enable-cache: true + - name: Install python uses: actions/setup-python@v5 with: - python-version: "3.13-dev" + python-version: "3.14-dev" + - run: python --version - - name: pdm lock - if: hashFiles('pdm.lock') == '' - run: pdm lock - - name: pdm sync --dev - run: pdm sync --dev + + - name: uv lock + if: hashFiles('uv.lock') == '' + run: uv lock + + - name: uv sync --dev + run: uv sync --dev + - name: make test run: make test + # https://twitter.com/alcuadrado/status/1571291687837732873 update: # This action checks that updating the dependencies of this crate to the latest available that - # satisfy the versions in Cargo.toml does not break this crate. This is important as consumers + # satisfy the versions in pyproject.toml does not break this crate. This is important as consumers # of this crate will generally use the latest available crates. This is subject to the standard # Cargo semver rules (i.e cargo does not update to a new major version unless explicitly told # to). runs-on: ubuntu-latest name: ubuntu / 3.12 / updates work - # There's no point running this if no Cargo.lock was checked in in the first place, since we'd + # There's no point running this if no uv.lock was checked in in the first place, since we'd # just redo what happened in the regular test job. Unfortunately, hashFiles only works in if on # steps, so we repeat it. - continue-on-error: true # allow failure until py3.8 is dropped steps: - uses: actions/checkout@v4 with: submodules: true + + - name: Set up uv + if: hashFiles('uv.lock') != '' + uses: astral-sh/setup-uv@v3 + with: + version: ${{ env.UV_VERSION }} + enable-cache: true + - name: Install 3.12 - if: hashFiles('pdm.lock') != '' - uses: pdm-project/setup-pdm@v4 + if: hashFiles('uv.lock') != '' + uses: actions/setup-python@v5 with: python-version: "3.12" - - name: pdm update - if: hashFiles('pdm.lock') != '' - run: pdm update - - name: pdm sync --dev - if: hashFiles('pdm.lock') != '' - run: pdm sync --dev + + - name: uv sync --dev --upgrade + if: hashFiles('uv.lock') != '' + run: uv sync --dev --upgrade + - name: make test - if: hashFiles('pdm.lock') != '' + if: hashFiles('uv.lock') != '' run: make test diff --git a/.github/workflows/test.yml b/.github/workflows/test.yml index 6f47355..a748cb3 100644 --- a/.github/workflows/test.yml +++ b/.github/workflows/test.yml @@ -15,13 +15,14 @@ permissions: contents: read env: - MINIMUM_PYTHON_VERSION: "3.8" + MINIMUM_PYTHON_VERSION: "3.9" + UV_VERSION: "0.5.1" + UV_CACHE_DIR: /tmp/.uv-cache jobs: - coverage: # This action runs tests for coverage collection and uploads them to codecov.io. - # This requires the secret `CODECOV_TOKEN` be set as secret on GitHub, both for + # This requires the secret `CODECOV_TOKEN` be set as secret on GitHub, both for # Actions and Dependabot name: "${{ matrix.os }} / ${{ matrix.python-version }} / coverage" @@ -29,14 +30,14 @@ jobs: max-parallel: 4 fail-fast: false matrix: - os: [ubuntu] + os: [ubuntu] python-version: # remove the unused versions - - "3.8" - "3.9" - "3.10" - "3.11" - # - "3.12" + - "3.12" + # - "3.13" TODO tokenizers need to be at version >=0.20.2 to support python 3.13 runs-on: ${{ matrix.os }}-latest env: @@ -47,28 +48,35 @@ jobs: with: submodules: true - - name: Set up the environment - uses: pdm-project/setup-pdm@v4 + - name: Set up Python ${{ matrix.python-version }} id: setup-python + uses: actions/setup-python@v5 with: python-version: ${{ matrix.python-version }} - - - name: Load cached venv - id: cached-venv + + - name: Set up uv + run: curl -LsSf https://astral.sh/uv/${{ env.UV_VERSION }}/install.sh | sh + + - name: Restore uv cache uses: actions/cache@v4 with: - path: .venv - key: venv-${{ runner.os }}-${{ steps.setup-python.outputs.python-version }}-${{ hashFiles('**/pyproject.toml') }}-${{ hashFiles('.github/workflows/test.yml') }} - + path: ${{ env.UV_CACHE_DIR }} + key: uv-${{ runner.os }}-${{ hashFiles('uv.lock') }} + restore-keys: | + uv-${{ runner.os }}-${{ hashFiles('uv.lock') }} + uv-${{ runner.os }} + - name: Install dependencies - if: steps.cached-venv.outputs.cache-hit != 'true' - run: make install-dev - + run: uv sync --all-extras --all-packages --dev + - name: Run tests for coverage run: make test-w-coverage cov_report=xml + - name: Minimize uv cache + run: uv cache prune --ci + - name: Upload coverage to Codecov - uses: codecov/codecov-action@v4 + uses: codecov/codecov-action@v5 with: token: ${{ secrets.CODECOV_TOKEN }} # directory: ./coverage @@ -86,74 +94,35 @@ jobs: # later than the actual version specified (e.g., when we choose just a major version, but a # method was added after this version). # - + runs-on: ubuntu-latest - name: ubuntu / 3.8 / minimal-versions + name: ubuntu / 3.9 / minimal-versions steps: - uses: actions/checkout@v4 with: submodules: true - - name: Set up the environment - uses: pdm-project/setup-pdm@v4 + + - name: Set up uv + run: curl -LsSf https://astral.sh/uv/${{ env.UV_VERSION }}/install.sh | sh + + - name: Set up Python ${{ env.MINIMUM_PYTHON_VERSION }} id: setup-python + uses: actions/setup-python@v5 with: python-version: ${{ env.MINIMUM_PYTHON_VERSION }} - - - name: pdm lock --strategy direct_minimal_versions - run: pdm lock --strategy direct_minimal_versions - - name: pdm sync --dev - run: pdm sync --dev + + - name: install lowest direct dependencies + run: uv sync --resolution lowest-direct --all-extras --all-packages --dev + - name: make test run: make test - run-example: - name: ubuntu / 3.8 / run-example / ${{ matrix.example-name }} - strategy: - max-parallel: 4 - fail-fast: false - matrix: - example-name: - - ocr-correction-viklofg-sweocr - - christoph-borg - runs-on: ubuntu-latest - steps: - - name: Check out repository - uses: actions/checkout@v4 - #---------------------------------------------- - # ----- setup python ----- - #---------------------------------------------- - - name: Set up the environment - uses: pdm-project/setup-pdm@v4 - id: setup-python - with: - python-version: ${{ env.MINIMUM_PYTHON_VERSION }} - - - - name: Load cached venv - id: cached-venv - uses: actions/cache@v4 - with: - path: .venv - key: venv-${{ runner.os }}-${{ steps.setup-python.outputs.python-version }}-${{ hashFiles('**/pyproject.toml') }}-${{ hashFiles('.github/workflows/ci.yml') }} - - - name: Install dependencies - if: steps.cached-venv.outputs.cache-hit != 'true' - run: make install-dev - - - name: Run example - run: | - source .venv/bin/activate - cd examples/${{ matrix.example-name }} - echo "" | sparv setup - sparv run - ls -R # https://github.com/marketplace/actions/alls-green#why used for branch protection checks test-check: if: always() - needs: + needs: - coverage - minimal - - run-example runs-on: ubuntu-latest permissions: {} steps: diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index 23fc147..a84b1f6 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -1,34 +1,27 @@ # See https://pre-commit.com for more information # See https://pre-commit.com/hooks.html for more hooks repos: - - repo: https://github.com/pre-commit/pre-commit-hooks - rev: v4.5.0 - hooks: - - id: check-yaml - stages: [commit] - - id: check-json - stages: [commit] - - id: check-toml - stages: [commit] - - id: check-merge-conflict - stages: [commit] - - id: check-case-conflict - stages: [commit] - - id: detect-private-key - stages: [commit] - # - id: end-of-file-fixer - - id: check-added-large-files - stages: [commit] - - repo: https://github.com/astral-sh/ruff-pre-commit - # Ruff version. - rev: v0.3.2 - hooks: - # Run the linter. - - id: ruff - # Run the formatter. - - id: ruff-format - - repo: https://github.com/crate-ci/committed - rev: v1.0.20 - hooks: - - id: committed - stages: [commit-msg] + - repo: https://github.com/pre-commit/pre-commit-hooks + rev: v5.0.0 + hooks: + - id: check-yaml + - id: check-json + - id: check-toml + - id: check-merge-conflict + - id: check-case-conflict + - id: detect-private-key + # - id: end-of-file-fixer + - id: check-added-large-files + - repo: https://github.com/astral-sh/ruff-pre-commit + # Ruff version. + rev: v0.7.4 + hooks: + # Run the linter. + - id: ruff + # Run the formatter. + - id: ruff-format + - repo: https://github.com/crate-ci/committed + rev: v1.0.20 + hooks: + - id: committed + stages: [commit-msg] diff --git a/Makefile b/Makefile index bf99b85..a569233 100644 --- a/Makefile +++ b/Makefile @@ -1,6 +1,7 @@ + # use this Makefile as base in your project by running -# git remote add make https://github.com/spraakbanken/python-pdm-make-conf +# git remote add make https://github.com/spraakbanken/python-uv-make-conf # git fetch make # git merge --allow-unrelated-histories make/main # @@ -57,12 +58,12 @@ help: @echo "" PLATFORM := `uname -o` -REPO := "sparv-sbx-ocr-correction" -PROJECT_SRC := "ocr-correction-viklofg-sweocr/src" +REPO := sparv-sbx-ocr-correction +PROJECT_SRC := ocr-correction-viklofg-sweocr/src ifeq (${VIRTUAL_ENV},) VENV_NAME = .venv - INVENV = pdm run + INVENV = uv run else VENV_NAME = ${VIRTUAL_ENV} INVENV = @@ -83,16 +84,16 @@ dev: install-dev # setup development environment install-dev: - pdm install --dev + uv sync --all-packages --group dev --verbose # setup production environment install: - pdm sync --prod + uv sync --no-dev -lock: pdm.lock +lock: uv.lock -pdm.lock: pyproject.toml - pdm lock +uv.lock: pyproject.toml + uv lock .PHONY: test test: @@ -139,7 +140,7 @@ check-fmt: ${INVENV} ruff format --check ${PROJECT_SRC} ${tests} build: - pdm build + uvx --from build pyproject-build --installer uv branch := "main" publish: @@ -150,12 +151,13 @@ publish: prepare-release: update-changelog tests/requirements-testing.lock # we use lock extension so that dependabot doesn't pick up changes in this file -tests/requirements-testing.lock: pyproject.toml pdm.lock - pdm export --dev --format requirements --output $@ +tests/requirements-testing.lock: pyproject.toml + uv export --dev --format requirements-txt --no-hashes --output-file $@ .PHONY: update-changelog update-changelog: CHANGELOG.md +.PHONY: CHANGELOG.md CHANGELOG.md: git cliff --unreleased --prepend $@ @@ -164,7 +166,8 @@ CHANGELOG.md: snapshot-update: ${INVENV} pytest --snapshot-update -.PHONY: kb-bert-prepare-release +### === project targets below this line === +.PHONY: viklofg-sweocr-prepare-release viklofg-sweocr-prepare-release: ocr-correction-viklofg-sweocr/CHANGELOG.md .PHONY: ocr-correction-viklofg-sweocr/CHANGELOG.md diff --git a/README.md b/README.md index 7220e56..8b6b1ab 100644 --- a/README.md +++ b/README.md @@ -8,3 +8,8 @@ This repo contains the following projects: - [sparv-sbx-ocr-correction-viklofg-sweocr](./ocr-correction-viklofg-sweocr/) [![PyPI version](https://badge.fury.io/py/sparv-sbx-ocr-correction-viklofg-sweocr.svg)](https://pypi.org/project/sparv-sbx-ocr-correction-viklofg-sweocr) + + +## Develop + +> [!NOTE] You might need to prepend `export CFLAGS="-Wno-error=incompatible-pointer-types" ; export CXXFLAGS="-Wno-error=incompatible-pointer-types" ;` to the `make dev` or `make install` calls. diff --git a/mypy.ini b/mypy.ini index f8584b4..6fcaf90 100644 --- a/mypy.ini +++ b/mypy.ini @@ -1,2 +1,2 @@ [mypy] -python_version = 3.8 +python_version = 3.9 diff --git a/ocr-correction-viklofg-sweocr/Makefile b/ocr-correction-viklofg-sweocr/Makefile index 88603cc..d69c38b 100644 --- a/ocr-correction-viklofg-sweocr/Makefile +++ b/ocr-correction-viklofg-sweocr/Makefile @@ -1,6 +1,6 @@ # use this Makefile as base in your project by running -# git remote add make https://github.com/spraakbanken/python-pdm-make-conf +# git remote add make https://github.com/spraakbanken/python-uv-make-conf # git fetch make # git merge --allow-unrelated-histories make/main # @@ -50,19 +50,19 @@ help: @echo "" @echo "publish [branch=]" @echo " pushes the given branch including tags to origin, for CI to publish based on tags. (Default: branch='main')" - @echo " Typically used after `make bumpversion`" + @echo " Typically used after 'make bumpversion'" @echo "" @echo "prepare-release" @echo " run tasks to prepare a release" @echo "" PLATFORM := `uname -o` -REPO := "sparv-sbx-ocr-correction" -PROJECT_SRC := "src/ocr_correction_viklofg_sweocr" +REPO := sparv-sbx-ocr-correction +PROJECT_SRC := src/ocr_correction_viklofg_sweocr ifeq (${VIRTUAL_ENV},) VENV_NAME = .venv - INVENV = pdm run + INVENV = uv run else VENV_NAME = ${VIRTUAL_ENV} INVENV = @@ -83,11 +83,16 @@ dev: install-dev # setup development environment install-dev: - pdm install --dev + uv sync --dev # setup production environment install: - pdm sync --prod + uv sync --no-dev + +lock: uv.lock + +uv.lock: pyproject.toml + uv lock .PHONY: test test: @@ -134,7 +139,7 @@ check-fmt: ${INVENV} ruff format --check ${PROJECT_SRC} ${tests} build: - pdm build + uvx --from build pyproject-build --installer uv branch := "main" publish: @@ -142,20 +147,28 @@ publish: .PHONY: prepare-release -prepare-release: tests/requirements-testing.lock +prepare-release: update-changelog tests/requirements-testing.lock # we use lock extension so that dependabot doesn't pick up changes in this file tests/requirements-testing.lock: pyproject.toml - pdm export --dev --format requirements --no-hashes --output $@ - -.PHONY: kb-bert-prepare-release -kb-bert-prepare-release: ocr-correction-viklofg-sweocr/CHANGELOG.md + uv export --dev --format requirements-txt --no-hashes --output-file $@ -update-changelog: CHANGELOG.md ocr-correction-viklofg-sweocr/CHANGELOG.md +.PHONY: update-changelog +update-changelog: CHANGELOG.md +.PHONY: CHANGELOG.md CHANGELOG.md: git cliff --unreleased --prepend $@ +# update snapshots for `syrupy` +.PHONY: snapshot-update +snapshot-update: + ${INVENV} pytest --snapshot-update + +### === project targets below this line === +.PHONY: viklofg-sweocr-prepare-release +viklofg-sweocr-prepare-release: ocr-correction-viklofg-sweocr/CHANGELOG.md + .PHONY: ocr-correction-viklofg-sweocr/CHANGELOG.md ocr-correction-viklofg-sweocr/CHANGELOG.md: git cliff --unreleased --include-path "ocr-correction-viklofg-sweocr/**/*" --include-path "examples/ocr-correction-viklofg-sweocr/**/*" --prepend $@ diff --git a/ocr-correction-viklofg-sweocr/README.md b/ocr-correction-viklofg-sweocr/README.md index c54b137..74d8769 100644 --- a/ocr-correction-viklofg-sweocr/README.md +++ b/ocr-correction-viklofg-sweocr/README.md @@ -13,6 +13,9 @@ Sparv plugin to annotate corrections to OCR:ed documents. ## Install +> [!NOTE] You might need to prepend `export CFLAGS="-Wno-error=incompatible-pointer-types" ; export CXXFLAGS="-Wno-error=incompatible-pointer-types" ;` to the `pip install` call. + + In a virtual environment: ```bash diff --git a/ocr-correction-viklofg-sweocr/pdm.lock b/ocr-correction-viklofg-sweocr/pdm.lock deleted file mode 100644 index 50b8d53..0000000 --- a/ocr-correction-viklofg-sweocr/pdm.lock +++ /dev/null @@ -1,2265 +0,0 @@ -# This file is @generated by PDM. -# It is not intended for manual editing. - 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sparv plugin for computing suggested OCR improvements." +readme = "README.md" authors = [ { name = "SprĆ„kbanken Text", email = "sb-info@svenska.gu.se" }, { name = "Kristoffer Andersson", email = "kristoffer.andersson@gu.se" }, ] +license = { text = "MIT" } +requires-python = ">=3.9" dependencies = [ - "sparv-pipeline >=5.2.0", - "transformers>=4.34.1", - "parallel-corpus>=0.1.2", + "parallel-corpus>=0.2.0", + "sparv-pipeline>=5.2.0", + "transformers>=4.40.0,<4.45.0", # Code behave strange with transformers==4.45, see https://github.com/spraakbanken/sparv-sbx-ocr-correction/issues/52 ] -license = { text = "MIT" } -readme = "README.md" -requires-python = ">=3.8.1,<3.12" classifiers = [ "Development Status :: 3 - Alpha", # "Development Status :: 4 - Beta", @@ -22,24 +22,33 @@ classifiers = [ "License :: OSI Approved :: MIT License", "Operating System :: Unix", "Operating System :: POSIX", - # "Operating System :: Microsoft :: Windows", - "Programming Language :: Python :: 3.8", + "Operating System :: Microsoft :: Windows", + "Operating System :: MacOS", "Programming Language :: Python :: 3.9", "Programming Language :: Python :: 3.10", "Programming Language :: Python :: 3.11", - # "Programming Language :: Python :: 3.12", + "Programming Language :: Python :: 3.12", + "Programming Language :: Python :: 3.13", "Programming Language :: Python :: Implementation :: CPython", # "uncomment if you test on these interpreters:", # "Programming Language :: Python :: Implementation :: IronPython", # "Programming Language :: Python :: Implementation :: Jython", # "Programming Language :: Python :: Implementation :: Stackless", "Topic :: Utilities", + "Typing :: Typed", ] [build-system] requires = ["hatchling"] build-backend = "hatchling.build" +[dependency-groups] +dev = [ + "pytest>=8.3.3", + "syrupy>=4.7.2", + "sparv-pipeline-testing @ git+https://github.com/spraakbanken/sparv-pipeline-testing.git@v0.1.7", +] + [project.entry-points."sparv.plugin"] sbx_ocr_correction_viklofg_sweocr = "sbx_ocr_correction_viklofg_sweocr" @@ -57,13 +66,5 @@ packages = ["src/sbx_ocr_correction_viklofg_sweocr"] [tool.hatch.metadata] allow-direct-references = true -[tool.pdm] -distribution = true - - -[dependency-groups] -dev = [ - "pytest>=7.4.4", - "syrupy>=4.0.0", - "sparv-pipeline-testing @ git+https://github.com/spraakbanken/sparv-pipeline-testing.git@v0.1.7", -] +[tool.uv] +package = true diff --git a/ocr-correction-viklofg-sweocr/src/sbx_ocr_correction_viklofg_sweocr/__init__.py b/ocr-correction-viklofg-sweocr/src/sbx_ocr_correction_viklofg_sweocr/__init__.py index 4e7b87c..e63b139 100644 --- a/ocr-correction-viklofg-sweocr/src/sbx_ocr_correction_viklofg_sweocr/__init__.py +++ b/ocr-correction-viklofg-sweocr/src/sbx_ocr_correction_viklofg_sweocr/__init__.py @@ -1,7 +1,9 @@ +"""Sparv plugin to annotate tokens with correction of OCR errors.""" + from sbx_ocr_correction_viklofg_sweocr.annotations import annotate_ocr_correction __all__ = ["annotate_ocr_correction"] -__description__ = "Annotate words with corrections of OCR-errors." +__description__ = "Annotate tokens with corrections of OCR-errors." __version__ = "0.3.0" diff --git a/ocr-correction-viklofg-sweocr/src/sbx_ocr_correction_viklofg_sweocr/annotations.py b/ocr-correction-viklofg-sweocr/src/sbx_ocr_correction_viklofg_sweocr/annotations.py index 304a13b..4b016eb 100644 --- a/ocr-correction-viklofg-sweocr/src/sbx_ocr_correction_viklofg_sweocr/annotations.py +++ b/ocr-correction-viklofg-sweocr/src/sbx_ocr_correction_viklofg_sweocr/annotations.py @@ -1,4 +1,6 @@ -from typing import List, Optional, Tuple +"""Annotatinos for Sparv.""" + +from typing import Optional from sparv import api as sparv_api # type: ignore [import-untyped] from sparv.api import Annotation, Output, annotator # type: ignore [import-untyped] @@ -10,27 +12,20 @@ @annotator("OCR corrections as annotations", language=["swe"]) def annotate_ocr_correction( - out_ocr: Output = Output( - "sbx_ocr_correction_viklofg_sweocr.sbx-ocr-correction", cls="ocr_correction" - ), + out_ocr: Output = Output("sbx_ocr_correction_viklofg_sweocr.sbx-ocr-correction", cls="ocr_correction"), out_ocr_corr: Output = Output( "sbx_ocr_correction_viklofg_sweocr.sbx-ocr-correction:sbx_ocr_correction_viklofg_sweocr.ocr-correction--viklofg-sweocr", cls="ocr_correction:correction", ), - # out_ocr_correction: Output = Output( - # ":sbx_ocr_correction_viklofg_sweocr.ocr-correction--viklofg-sweocr", - # cls="sbx_ocr_correction_viklofg_sweocr", - # description="OCR Corrections from viklfog/swedish-ocr (format: '|:|...|)", # noqa: E501 - # ), word: Annotation = Annotation(""), sentence: Annotation = Annotation(""), token: Annotation = Annotation(""), ) -> None: + """Sparv annotator to compute OCR corrections as annotations.""" ocr_corrector = OcrCorrector.default() sentences, _orphans = sentence.get_children(word) token_word = list(word.read()) - # out_ocr_correction_annotation = word.create_empty_attribute() ocr_corrections = [] @@ -40,22 +35,18 @@ def annotate_ocr_correction( sent = [token_word[token_index] for token_index in sent_idx] ocr_corrections.append(ocr_corrector.calculate_corrections(sent)) - # for i, ocr_correction in enumerate(ocr_corrections, start=sent[0]): - # out_ocr_correction_annotation[i] = ocr_correction - # logger.info("writing annotations") - # out_ocr.write(ocr_spans) - # out_ocr_corr.write(ocr_corr_ann) parse_ocr_corrections(sentences, token, ocr_corrections, out_ocr, out_ocr_corr) def parse_ocr_corrections( - sentences: List, + sentences: list, token: Annotation, - ocr_corrections: List[List[Tuple[Tuple[int, int], Optional[str]]]], + ocr_corrections: list[list[tuple[tuple[int, int], Optional[str]]]], out_ocr: Output, out_ocr_corr: Output, ) -> None: + """Parse OCR corrections and write output.""" ocr_spans = [] ocr_corr_ann = [] diff --git a/ocr-correction-viklofg-sweocr/src/sbx_ocr_correction_viklofg_sweocr/ocr_corrector.py b/ocr-correction-viklofg-sweocr/src/sbx_ocr_correction_viklofg_sweocr/ocr_corrector.py index acf753b..f0957ab 100644 --- a/ocr-correction-viklofg-sweocr/src/sbx_ocr_correction_viklofg_sweocr/ocr_corrector.py +++ b/ocr-correction-viklofg-sweocr/src/sbx_ocr_correction_viklofg_sweocr/ocr_corrector.py @@ -1,8 +1,10 @@ +"""OCR corrector.""" + import re -from typing import List, Optional, Tuple +from typing import Any, Optional from parallel_corpus import graph -from parallel_corpus.token import Token +from parallel_corpus.text_token import Token from sparv import api as sparv_api # type: ignore [import-untyped] from transformers import ( # type: ignore [import-untyped] AutoTokenizer, @@ -12,6 +14,7 @@ def bytes_length(s: str) -> int: + """Compute the length in bytes of a str.""" return len(s.encode("utf-8")) @@ -26,34 +29,31 @@ def bytes_length(s: str) -> int: class OcrCorrector: + """OCR Corrector.""" + TEXT_LIMIT: int = 127 - def __init__(self, *, tokenizer, model) -> None: + def __init__(self, *, tokenizer: Any, model: Any) -> None: + """Construct an OcrCorrector.""" self.tokenizer = tokenizer self.model = model - self.pipeline = pipeline( - "text2text-generation", model=model, tokenizer=tokenizer - ) + self.pipeline = pipeline("text2text-generation", model=model, tokenizer=tokenizer) @classmethod def default(cls) -> "OcrCorrector": - tokenizer = AutoTokenizer.from_pretrained( - TOKENIZER_NAME, revision=TOKENIZER_REVISION - ) - model = T5ForConditionalGeneration.from_pretrained( - MODEL_NAME, revision=MODEL_REVISION - ) + """Create a default OcrCorrector.""" + tokenizer = AutoTokenizer.from_pretrained(TOKENIZER_NAME, revision=TOKENIZER_REVISION) + model = T5ForConditionalGeneration.from_pretrained(MODEL_NAME, revision=MODEL_REVISION) return cls(model=model, tokenizer=tokenizer) - def calculate_corrections( - self, text: List[str] - ) -> List[Tuple[Tuple[int, int], Optional[str]]]: + def calculate_corrections(self, text: list[str]) -> list[tuple[tuple[int, int], Optional[str]]]: + """Calculate OCR corrections for a given text.""" logger.debug("Analyzing '%s'", text) - parts: List[str] = [] - curr_part: List[str] = [] + parts: list[str] = [] + curr_part: list[str] = [] curr_len = 0 - ocr_corrections: List[Tuple[Tuple[int, int], Optional[str]]] = [] + ocr_corrections: list[tuple[tuple[int, int], Optional[str]]] = [] for word in text: len_word = bytes_length(word) if (curr_len + len_word + 1) > self.TEXT_LIMIT: @@ -66,20 +66,24 @@ def calculate_corrections( parts.append(TOK_SEP.join(curr_part)) curr_start = 0 for part in parts: - suggested_text = self.pipeline(part)[0]["generated_text"] + pipeline_result = self.pipeline(part) + logger.debug("type(pipeline_result)=%s", type(pipeline_result)) + if len(pipeline_result) != 1: + raise NotImplementedError(f"Unexpected length of result = {len(pipeline_result)}") + logger.debug("part=%s pipeline_result[0]=%s", part, pipeline_result[0]) + suggested_text = pipeline_result[0]["generated_text"] suggested_text = PUNCTUATION.sub(r" \g<0>", suggested_text) graph_aligned = graph.init_with_source_and_target(part, suggested_text) - span_ann, curr_start = align_and_diff(graph_aligned, curr_start=curr_start) + span_ann, curr_start = _align_and_diff(graph_aligned, curr_start=curr_start) ocr_corrections.extend(span_ann) logger.debug("Finished analyzing. ocr_corrections=%s", ocr_corrections) return ocr_corrections -def align_and_diff( - g: graph.Graph, *, curr_start: int -) -> Tuple[List[Tuple[Tuple[int, int], Optional[str]]], int]: +def _align_and_diff(g: graph.Graph, *, curr_start: int) -> tuple[list[tuple[tuple[int, int], Optional[str]]], int]: corrections = [] + edge_map = graph.edge_map(g) visited_tokens = set() for s_token in g.source: @@ -95,12 +99,8 @@ def align_and_diff( logger.debug("processing s_token=%s", s_token) if len(source_ids) == len(target_ids): - source_text = "".join( - lookup_text(g.source, s_id) for s_id in source_ids - ).strip() - target_text = "".join( - lookup_text(g.target, s_id) for s_id in target_ids - ).strip() + source_text = "".join(lookup_text(g.source, s_id) for s_id in source_ids).strip() + target_text = "".join(lookup_text(g.target, s_id) for s_id in target_ids).strip() start = curr_start curr_start += 1 corrections.append( @@ -111,9 +111,7 @@ def align_and_diff( ) elif len(source_ids) == 1: - target_texts = " ".join( - lookup_text(g.target, id_).strip() for id_ in target_ids - ) + target_texts = " ".join(lookup_text(g.target, id_).strip() for id_ in target_ids) source_text = s_token.text.strip() start = curr_start curr_start += 1 @@ -131,14 +129,13 @@ def align_and_diff( corrections.append(((start, curr_start), target_text)) else: # TODO Handle this correct (https://github.com/spraakbanken/sparv-sbx-ocr-correction/issues/50) - raise NotImplementedError( - f"Handle several sources, {source_ids=} {target_ids=} {g.source=} {g.target=}" # noqa: E501 - ) + raise NotImplementedError(f"Handle several sources, {source_ids=} {target_ids=} {g.source=} {g.target=}") return corrections, curr_start -def lookup_text(tokens: List[Token], id_: str) -> str: +def lookup_text(tokens: list[Token], id_: str) -> str: + """Lookup text from a token with id `id_`.""" for token in tokens: if token.id == id_: return token.text diff --git a/ocr-correction-viklofg-sweocr/tests/requirements-testing.lock b/ocr-correction-viklofg-sweocr/tests/requirements-testing.lock index a65bd38..4fbe848 100644 --- a/ocr-correction-viklofg-sweocr/tests/requirements-testing.lock +++ b/ocr-correction-viklofg-sweocr/tests/requirements-testing.lock @@ -1,98 +1,94 @@ -# This file is @generated by PDM. -# Please do not edit it manually. - +# This file was autogenerated by uv via the following command: +# uv export --dev --format requirements-txt --no-hashes --output-file tests/requirements-testing.lock +-e ./ocr-correction-viklofg-sweocr appdirs==1.4.4 argcomplete==3.1.6 -attrs==23.2.0 -certifi==2024.2.2 -cffi==1.16.0; platform_python_implementation != "PyPy" -charset-normalizer==3.3.2 +attrs==24.2.0 +certifi==2024.8.30 +cffi==1.17.1 ; platform_python_implementation != 'PyPy' +charset-normalizer==3.4.0 click==8.1.7 -colorama==0.4.6; sys_platform == "win32" or platform_system == "Windows" +colorama==0.4.6 ; sys_platform == 'win32' or platform_system == 'Windows' configargparse==1.7 connection-pool==0.0.3 -cryptography==42.0.7 +cryptography==43.0.3 datrie==0.8.2 -diff-match-patch==20230430 -docutils==0.20.1 +diff-match-patch==20241021 +docutils==0.21.2 docx2python==1.27.1 -dpath==2.1.6 -emoji==2.11.1 -exceptiongroup==1.2.1; python_version < "3.11" -fastjsonschema==2.19.1 -filelock==3.14.0 -fsspec==2024.3.1 +dpath==2.2.0 +emoji==2.14.0 +exceptiongroup==1.2.2 ; python_full_version < '3.11' +fastjsonschema==2.20.0 +filelock==3.16.1 +fsspec==2024.10.0 gitdb==4.0.11 gitpython==3.1.43 -huggingface-hub==0.23.0 +huggingface-hub==0.26.1 humanfriendly==10.0 -idna==3.7 +idna==3.10 importlib-metadata==6.8.0 -importlib-resources==6.4.0; python_version < "3.9" iniconfig==2.0.0 -intel-openmp==2021.4.0; platform_system == "Windows" jinja2==3.1.4 joblib==1.4.2 jsonschema==4.20.0 -jsonschema-specifications==2023.12.1 +jsonschema-specifications==2024.10.1 jupyter-core==5.7.2 markdown-it-py==3.0.0 -markupsafe==2.1.5 +markupsafe==3.0.2 mdurl==0.1.2 -mkl==2021.4.0; platform_system == "Windows" -more-itertools==10.2.0 +more-itertools==10.5.0 mpmath==1.3.0 mypy-extensions==1.0.0 nbformat==5.10.4 -networkx==3.1 +networkx==3.2.1 nltk==3.8.1 -numpy==1.24.4 -nvidia-cublas-cu12==12.1.3.1; platform_system == "Linux" and platform_machine == "x86_64" -nvidia-cuda-cupti-cu12==12.1.105; platform_system == "Linux" and platform_machine == "x86_64" -nvidia-cuda-nvrtc-cu12==12.1.105; platform_system == "Linux" and platform_machine == "x86_64" -nvidia-cuda-runtime-cu12==12.1.105; platform_system == "Linux" and platform_machine == "x86_64" -nvidia-cudnn-cu12==8.9.2.26; platform_system == "Linux" and platform_machine == "x86_64" -nvidia-cufft-cu12==11.0.2.54; platform_system == "Linux" and platform_machine == "x86_64" -nvidia-curand-cu12==10.3.2.106; platform_system == "Linux" and platform_machine == "x86_64" -nvidia-cusolver-cu12==11.4.5.107; platform_system == "Linux" and platform_machine == "x86_64" -nvidia-cusparse-cu12==12.1.0.106; platform_system == "Linux" and platform_machine == "x86_64" -nvidia-nccl-cu12==2.20.5; platform_system == "Linux" and platform_machine == "x86_64" -nvidia-nvjitlink-cu12==12.4.127; platform_system == "Linux" and platform_machine == "x86_64" -nvidia-nvtx-cu12==12.1.105; platform_system == "Linux" and platform_machine == "x86_64" -packaging==24.0 -parallel-corpus==0.1.2 +numpy==1.26.4 +nvidia-cublas-cu12==12.4.5.8 ; platform_machine == 'x86_64' and platform_system == 'Linux' +nvidia-cuda-cupti-cu12==12.4.127 ; platform_machine == 'x86_64' and platform_system == 'Linux' +nvidia-cuda-nvrtc-cu12==12.4.127 ; platform_machine == 'x86_64' and platform_system == 'Linux' +nvidia-cuda-runtime-cu12==12.4.127 ; platform_machine == 'x86_64' and platform_system == 'Linux' +nvidia-cudnn-cu12==9.1.0.70 ; platform_machine == 'x86_64' and platform_system == 'Linux' +nvidia-cufft-cu12==11.2.1.3 ; platform_machine == 'x86_64' and platform_system == 'Linux' +nvidia-curand-cu12==10.3.5.147 ; platform_machine == 'x86_64' and platform_system == 'Linux' +nvidia-cusolver-cu12==11.6.1.9 ; platform_machine == 'x86_64' and platform_system == 'Linux' +nvidia-cusparse-cu12==12.3.1.170 ; platform_machine == 'x86_64' and platform_system == 'Linux' +nvidia-nccl-cu12==2.21.5 ; platform_machine == 'x86_64' and platform_system == 'Linux' +nvidia-nvjitlink-cu12==12.4.127 ; platform_machine == 'x86_64' and platform_system == 'Linux' +nvidia-nvtx-cu12==12.4.127 ; platform_machine == 'x86_64' and platform_system == 'Linux' +packaging==24.1 +parallel-corpus==0.2.0 pdfminer-six==20221105 pdfplumber==0.10.3 -pillow==10.3.0 -pkgutil-resolve-name==1.3.10; python_version < "3.9" +pillow==11.0.0 plac==1.4.3 -platformdirs==4.2.1 +platformdirs==4.3.6 pluggy==1.5.0 -prompt-toolkit==3.0.43 +prompt-toolkit==3.0.36 protobuf==3.20.3 -psutil==5.9.8 -pulp==2.8.0 +psutil==6.1.0 +pulp==2.9.0 pycountry==22.3.5 -pycparser==2.22; platform_python_implementation != "PyPy" +pycparser==2.22 ; platform_python_implementation != 'PyPy' pygments==2.18.0 -pypdfium2==4.29.0 -pyreadline3==3.4.1; sys_platform == "win32" and python_version >= "3.8" -pytest==8.2.0 +pypdfium2==4.30.0 +pyreadline3==3.5.4 ; sys_platform == 'win32' +pytest==8.3.3 python-dateutil==2.8.2 python-json-logger==2.0.7 -pywin32==306; sys_platform == "win32" and platform_python_implementation != "PyPy" +pywin32==308 ; platform_python_implementation != 'PyPy' and sys_platform == 'win32' pyyaml==6.0.1 questionary==1.10.0 referencing==0.35.1 -regex==2024.4.28 -requests==2.31.0 +regex==2024.9.11 +requests==2.32.3 reretry==0.11.8 rich==13.7.0 -rpds-py==0.18.1 -safetensors==0.4.3 -setuptools==69.5.1 +rpds-py==0.20.0 +safetensors==0.4.5 +setuptools==75.2.0 six==1.16.0 -smart-open==7.0.4 +smart-open==7.0.5 smmap==5.0.1 snakemake==7.32.3 sparv-pipeline==5.2.0 @@ -100,23 +96,22 @@ sparv-pipeline-testing @ git+https://github.com/spraakbanken/sparv-pipeline-test stanza==1.5.1 stopit==1.1.2 strenum==0.4.15 -sympy==1.12 -syrupy==4.6.1 +sympy==1.13.1 +syrupy==4.7.2 tabulate==0.9.0 -tbb==2021.12.0; platform_system == "Windows" throttler==1.2.2 tokenizers==0.19.1 -tomli==2.0.1; python_version < "3.11" +tomli==2.0.2 ; python_full_version < '3.11' toposort==1.10 -torch==2.3.0 -tqdm==4.66.4 +torch==2.5.0 +tqdm==4.66.5 traitlets==5.14.3 -transformers==4.40.2 -triton==2.3.0; platform_system == "Linux" and platform_machine == "x86_64" and python_version < "3.12" -typing-extensions==4.11.0 +transformers==4.44.2 +triton==3.1.0 ; python_full_version < '3.13' and platform_machine == 'x86_64' and platform_system == 'Linux' +typing-extensions==4.12.2 typing-inspect==0.9.0 -urllib3==2.2.1 +urllib3==2.2.3 wcwidth==0.2.13 wrapt==1.16.0 yte==1.5.4 -zipp==3.18.1 +zipp==3.20.2 diff --git a/ocr-correction-viklofg-sweocr/tests/test_annotations.py b/ocr-correction-viklofg-sweocr/tests/test_annotations.py index 50ca4ea..b498252 100644 --- a/ocr-correction-viklofg-sweocr/tests/test_annotations.py +++ b/ocr-correction-viklofg-sweocr/tests/test_annotations.py @@ -2,16 +2,14 @@ from sparv_pipeline_testing import MemoryOutput, MockAnnotation -def test_annotate_ocr_correction(snapshot) -> None: +def test_annotate_ocr_correction(snapshot) -> None: # noqa: ANN001 output_ocr: MemoryOutput = MemoryOutput() output_ocr_corr: MemoryOutput = MemoryOutput() # "Jonath an saknades ." # "12345678901234567890" # " 1 2" word = MockAnnotation(name="", values=["Jonath", "an", "saknades", "."]) - sentence = MockAnnotation( - name="", children={"": [[0, 1, 2, 3]]} - ) + sentence = MockAnnotation(name="", children={"": [[0, 1, 2, 3]]}) token = MockAnnotation(name="", spans=[(0, 6), (7, 9), (10, 18), (19, 20)]) annotate_ocr_correction(output_ocr, output_ocr_corr, word, sentence, token) diff --git a/ocr-correction-viklofg-sweocr/tests/test_ocr_suggestor.py b/ocr-correction-viklofg-sweocr/tests/test_ocr_suggestor.py index fa90704..b660f07 100644 --- a/ocr-correction-viklofg-sweocr/tests/test_ocr_suggestor.py +++ b/ocr-correction-viklofg-sweocr/tests/test_ocr_suggestor.py @@ -1,7 +1,7 @@ from sbx_ocr_correction_viklofg_sweocr.ocr_corrector import OcrCorrector -def test_short_text(ocr_corrector: OcrCorrector, snapshot): +def test_short_text(ocr_corrector: OcrCorrector, snapshot) -> None: # noqa: ANN001 text = [ "Den", "i", @@ -21,7 +21,7 @@ def test_short_text(ocr_corrector: OcrCorrector, snapshot): assert actual == snapshot -def test_long_text(ocr_corrector: OcrCorrector, snapshot): +def test_long_text(ocr_corrector: OcrCorrector, snapshot) -> None: # noqa: ANN001 text1 = [ "Fƶrvaltningen", "af", @@ -62,7 +62,7 @@ def test_long_text(ocr_corrector: OcrCorrector, snapshot): assert actual == snapshot -def test_issue_40(ocr_corrector: OcrCorrector, snapshot) -> None: +def test_issue_40(ocr_corrector: OcrCorrector, snapshot) -> None: # noqa: ANN001 example = [ "Jonathan", "saknades", diff --git a/pdm.lock b/pdm.lock deleted file mode 100644 index f55ba39..0000000 --- a/pdm.lock +++ /dev/null @@ -1,2609 +0,0 @@ -# This file is @generated by PDM. -# It is not intended for manual editing. - -[metadata] -groups = ["default", "dev"] -strategy = ["inherit_metadata"] -lock_version = "4.5.0" -content_hash = "sha256:e402f3604a71fcf2e2fbec0fc4534703e51fdd7d599400893f8db559853a316c" - -[[metadata.targets]] -requires_python = ">=3.8.1,<3.12" - -[[package]] -name = "annotated-types" -version = "0.7.0" -requires_python = ">=3.8" -summary = "Reusable constraint types to use with typing.Annotated" -groups = ["dev"] -dependencies = [ - "typing-extensions>=4.0.0; python_version < \"3.9\"", -] -files = [ - {file = "annotated_types-0.7.0-py3-none-any.whl", hash = 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"-e ocr-correction-viklofg-sweocr @ file:///${PROJECT_ROOT}/ocr-correction-viklofg-sweocr", - "pytest>=8.1.1", - "pytest-cov>=4.1.0", - "mypy>=1.9.0", - "ruff>=0.3.2", - "bump-my-version>=0.19.0", - "syrupy>=4.0.0", + "bump-my-version>=0.28.0", + "mypy>=1.12.1", + "pytest>=8.3.3", + "pytest-cov>=5.0.0", + "ruff>=0.7.0", + "syrupy>=4.7.2", "sparv-pipeline-testing @ git+https://github.com/spraakbanken/sparv-pipeline-testing.git@v0.1.7", ] + +[tool.uv] + +[tool.uv.workspace] +members = ["ocr-correction-viklofg-sweocr"] + +[tool.pytest.ini_options] +# log_cli = true +# log_cli_level = "WARNING" +# log_cli_format = "%(asctime)s [%(levelname)8s] %(message)s (%(filename)s:%(lineno)s)" +# log_cli_date_format = "%Y-%m-%d %H:%M:%S" + +log_file = "pytest.log" +log_file_level = "DEBUG" +log_file_format = "%(asctime)s [%(levelname)8s] %(message)s (%(filename)s:%(lineno)s)" +log_file_date_format = "%Y-%m-%d %H:%M:%S" diff --git a/ruff.toml b/ruff.toml index 31a5169..7dd77f6 100644 --- a/ruff.toml +++ b/ruff.toml @@ -1,31 +1,61 @@ -target-version = "py38" +line-length = 120 + +target-version = "py39" [lint] select = [ - "A", -# "ANN", - "B", - "BLE", - "C4", - "C90", -# "D", - "E", - "F", - "FBT", - "I", - "RUF", - "S", - "YTT", + "A", # flake8-builtins + "ANN", # flake8-annotations + "ARG", # flake8-unused-arguments + "B", # flake8-bugbear + "C4", # flake8-comprehensions + "COM", # flake8-commas + "D", # pydocstyle + "D400", # pydocstyle: ends-in-period + "D401", # pydocstyle: non-imperative-mood + "E", # pycodestyle: errors + "F", # Pyflakes + "FLY", # flynt + "FURB", # refurb + "G", # flake8-logging-format + "I", # isort + "ISC", # flake8-implicit-str-concat + "N", # pep8-naming + "PERF", # Perflint + "PIE", # flake8-pie + "PL", # Pylint + # "PT", # flake8-pytest-style + "PTH", # flake8-use-pathlib + "Q", # flake8-quotes + "RET", # flake8-return + "RSE", # flake8-raise + "RUF", # Ruff-specific rules + "SIM", # flake8-simplify + "T20", # flake8-print + "TID", # flake8-tidy-imports + "UP", # pyupgrade + "W", # pycodestyle: warnings ] - -# Never enforce `E501` (line length violations). -# ignore = ["E501"] -ignore = ["ANN101", "ANN102","D203", "D213", "B008"] +ignore = [ + "ANN101", # flake8-annotations: missing-type-self (deprecated) + "ANN102", # flake8-annotations: missing-type-cls (deprecated) + "ANN401", # flake8-annotations: any-type + "B008", # flake8-bugbear: function-call-in-default-argument + "ISC001", + "COM812", # flake8-commas: missing-trailing-comma + "PLR09", # Pylint: too-many-* + "SIM105", # flake8-simplify: suppressible-exception +] +preview = true # Avoid trying to fix flake8-bugbear (`B`) violations. unfixable = ["B"] + +[lint.pydocstyle] +convention = "google" + + # Ignore `E402` (import violations) in all `__init__.py` files, and in `path/to/file.py`. 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