From 9176ace7ed0fea8eb6ff05e1b00be21d798dd15a Mon Sep 17 00:00:00 2001 From: Kilian Cavalotti Date: Tue, 9 Jan 2024 14:01:46 -0800 Subject: [PATCH] docs: updated software list --- includes/data/software.yml | 624 ++++++++++++++++++---------------- src/docs/software/updates.xml | 18 + 2 files changed, 340 insertions(+), 302 deletions(-) diff --git a/includes/data/software.yml b/includes/data/software.yml index ac3f0cab2..e61312af0 100644 --- a/includes/data/software.yml +++ b/includes/data/software.yml @@ -2380,21 +2380,26 @@ software_modules: from Bayesian hierarchical models using Markov chain Monte Carlo (MCMC)., markedDefault: false, versionName: 4.3.1} - categories: math, numerical library - defaultVersionName: 3.1.0 - description: libflame is a portable library for dense matrix computations, providing - much of the functionality present in LAPACK - package: libflame - url: https://github.com/amd/libflame + defaultVersionName: 1.14.3_py27 + description: NumPy is the fundamental package for scientific computing with + Python. + package: py-numpy + url: http://www.numpy.org versions: - - {description: 'libflame is a portable library for dense matrix computations, - providing much of the functionality present in LAPACK', markedDefault: false, - versionName: '2.1'} - - {description: 'libflame is a portable library for dense matrix computations, - providing much of the functionality present in LAPACK', markedDefault: false, - versionName: 2.2.4} - - {description: 'libflame is a portable library for dense matrix computations, - providing much of the functionality present in LAPACK', markedDefault: false, - versionName: 3.1.0} + - {description: NumPy is the fundamental package for scientific computing with + Python., markedDefault: false, versionName: 1.14.3_py36} + - {description: NumPy is the fundamental package for scientific computing with + Python., markedDefault: false, versionName: 1.17.2_py36} + - {description: NumPy is the fundamental package for scientific computing with + Python., markedDefault: false, versionName: 1.18.1_py36} + - {description: NumPy is the fundamental package for scientific computing with + Python., markedDefault: false, versionName: 1.19.2_py36} + - {description: NumPy is the fundamental package for scientific computing with + Python., markedDefault: false, versionName: 1.20.3_py39} + - {description: NumPy is the fundamental package for scientific computing with + Python., markedDefault: false, versionName: 1.24.2_py39} + - {description: NumPy is the fundamental package for scientific computing with + Python., markedDefault: true, versionName: 1.14.3_py27} - categories: math, deep learning defaultVersionName: 8.5.1.7_py39 description: Python bindings for the TensorRT library. @@ -2540,6 +2545,27 @@ software_modules: versions: - {description: NLopt is a free/open-source library for nonlinear optimization., markedDefault: false, versionName: 2.6.2} + - categories: math, optimization + defaultVersionName: 2.10.0_py39 + description: Optuna is an automatic hyperparameter optimization software framework, + particularly designed for machine learning. + package: py-optuna + url: https://optuna.readthedocs.io/ + versions: + - {description: 'Optuna is an automatic hyperparameter optimization software + framework, particularly designed for machine learning.', markedDefault: false, + versionName: 2.10.0_py39} + - categories: math, technical computing + defaultVersionName: 13.1.0 + description: A symbolic language and platform for modern technical computing. + package: mathematica + url: http://www.wolfram.com/mathematica + versions: + - description: A symbolic language and platform for modern technical computing. + markedDefault: false + properties: + license: {restricted: 1} + versionName: 13.1.0 - categories: math, numerical library defaultVersionName: 4.1.0 description: The MPFR library is a C library for multiple-precision floating-point @@ -2560,57 +2586,94 @@ software_modules: - {description: 'glum is a fast, modern, Python-first GLM estimation library.', markedDefault: false, versionName: 2.1.2_py39} - categories: math, numerical library - defaultVersionName: 3.18.5_py39 - description: Python bindings for PETSc, the Portable, Extensible Toolkit for - Scientific Computation. - package: py-petsc4py - url: http://petsc.org + defaultVersionName: 3.1.0 + description: libflame is a portable library for dense matrix computations, providing + much of the functionality present in LAPACK + package: libflame + url: https://github.com/amd/libflame versions: - - {description: 'Python bindings for PETSc, the Portable, Extensible Toolkit - for Scientific Computation.', markedDefault: false, versionName: 3.18.5_py39} + - {description: 'libflame is a portable library for dense matrix computations, + providing much of the functionality present in LAPACK', markedDefault: false, + versionName: '2.1'} + - {description: 'libflame is a portable library for dense matrix computations, + providing much of the functionality present in LAPACK', markedDefault: false, + versionName: 2.2.4} + - {description: 'libflame is a portable library for dense matrix computations, + providing much of the functionality present in LAPACK', markedDefault: false, + versionName: 3.1.0} + - categories: math, machine learning + defaultVersionName: 0.19.1_py27 + description: Scikit-learn is a free software machine learning library for the + Python programming language. + package: py-scikit-learn + url: http://scikit-learn.org + versions: + - {description: Scikit-learn is a free software machine learning library for + the Python programming language., markedDefault: false, versionName: 0.19.1_py36} + - {description: Scikit-learn is a free software machine learning library for + the Python programming language., markedDefault: false, versionName: 0.24.2_py36} + - {description: Scikit-learn is a free software machine learning library for + the Python programming language., markedDefault: false, versionName: 1.0.2_py39} + - {description: Scikit-learn is a free software machine learning library for + the Python programming language., markedDefault: false, versionName: 1.3.2_py39} + - {description: Scikit-learn is a free software machine learning library for + the Python programming language., markedDefault: true, versionName: 0.19.1_py27} - categories: math, deep learning - defaultVersionName: 1.8_py27 - description: TensorboardX is TensorBoard™ for PyTorch (and Chainer, MXNet, NumPy...) - package: py-tensorboardx - url: https://tensorboardx.readthedocs.io + defaultVersionName: '20180202' + description: Torch is a scientific computing framework with wide support for + machine learning algorithms that puts GPUs first. + package: torch + url: http://torch.ch versions: - - description: TensorboardX is TensorBoard™ for PyTorch (and Chainer, MXNet, - NumPy...) + - description: Torch is a scientific computing framework with wide support for + machine learning algorithms that puts GPUs first. markedDefault: false properties: arch: {gpu: 1} - versionName: 1.8_py27 - - categories: math, numerical library - defaultVersionName: 3.18.5 - description: PETSc, the Portable, Extensible Toolkit for Scientific Computation, - is a suite of data structures and routines for the scalable (parallel) solution - of scientific applications modeled by partial differential equations. - package: petsc - url: http://petsc.org + versionName: '20180202' + - categories: math, deep learning + defaultVersionName: 2.1.5_py27 + description: Keras is a high-level neural networks API, written in Python and + capable of running on top of TensorFlow, CNTK, or Theano. + package: py-keras + url: http://keras.io versions: - - description: PETSc is a suite of data structures and routines for the scalable - (parallel) solution of scientific applications modeled by partial differential - equations. + - description: Keras is a high-level neural networks API, written in Python + and capable of running on top of TensorFlow, CNTK, or Theano. markedDefault: false properties: - parallel: {mpi: 1} - versionName: 3.10.3 - - description: PETSc, the Portable, Extensible Toolkit for Scientific Computation, - is a suite of data structures and routines for the scalable (parallel) solution - of scientific applications modeled by partial differential equations. + arch: {gpu: 1} + versionName: 2.0.8_py27 + - description: Keras is a high-level neural networks API, written in Python + and capable of running on top of TensorFlow, CNTK, or Theano. markedDefault: false properties: - parallel: {mpi: 1} - versionName: 3.18.5 - - categories: math, numerical library - defaultVersionName: 2017.1_py27 - description: PyUblas provides a seamless glue layer between Numpy and Boost.Ublas - for use with Boost.Python. - package: py-pyublas - url: https://mathema.tician.de/software/pyublas/ - versions: - - {description: PyUblas provides a seamless glue layer between Numpy and Boost.Ublas - for use with Boost.Python., markedDefault: false, versionName: 2017.1_py27} + arch: {gpu: 1} + versionName: 2.1.5_py36 + - description: Keras is a high-level neural networks API, written in Python + and capable of running on top of TensorFlow, CNTK, or Theano. + markedDefault: false + properties: + arch: {gpu: 1} + versionName: 2.2.4_py27 + - description: Keras is a high-level neural networks API, written in Python + and capable of running on top of TensorFlow, CNTK, or Theano. + markedDefault: false + properties: + arch: {gpu: 1} + versionName: 2.2.4_py36 + - description: Keras is a high-level neural networks API, written in Python + and capable of running on top of TensorFlow, CNTK, or Theano. + markedDefault: false + properties: + arch: {gpu: 1} + versionName: 2.3.1_py36 + - description: Keras is a high-level neural networks API, written in Python + and capable of running on top of TensorFlow, CNTK, or Theano. + markedDefault: true + properties: + arch: {gpu: 1} + versionName: 2.1.5_py27 - categories: math, statistics defaultVersionName: '1.3' description: GNU datamash is a command-line program which performs basic numeric, @@ -2621,19 +2684,19 @@ software_modules: - {description: 'GNU datamash is a command-line program which performs basic numeric, textual and statistical operations on input textual data files.', markedDefault: false, versionName: '1.3'} - - categories: math, numerical library - defaultVersionName: 6.2.1 - description: GMP is a free library for arbitrary precision arithmetic, operating - on signed integers, rational numbers, and floating-point numbers. - package: gmp - url: https://gmplib.org + - categories: math, linear algebra + defaultVersionName: 0.2.0.1 + description: NVIDIA cuSPARSELt is a high-performance CUDA library for sparse + matrix-matrix multiplication. + package: cusparselt + url: https://docs.nvidia.com/cuda/cusparselt/index.html versions: - - {description: 'GMP is a free library for arbitrary precision arithmetic, operating - on signed integers, rational numbers, and floating-point numbers.', markedDefault: false, - versionName: 6.1.2} - - {description: 'GMP is a free library for arbitrary precision arithmetic, operating - on signed integers, rational numbers, and floating-point numbers.', markedDefault: false, - versionName: 6.2.1} + - description: NVIDIA cuSPARSELt is a high-performance CUDA library for sparse + matrix-matrix multiplication. + markedDefault: false + properties: + arch: {gpu: 1} + versionName: 0.2.0.1 - categories: math, symbolic defaultVersionName: 1.1.11 description: GNU libmatheval is a library (callable from C and Fortran) to parse @@ -2657,30 +2720,25 @@ software_modules: properties: arch: {gpu: 1} versionName: 1.6.3_py27 - - categories: math, deep learning - defaultVersionName: '20180202' - description: Torch is a scientific computing framework with wide support for - machine learning algorithms that puts GPUs first. - package: torch - url: http://torch.ch + - categories: math, statistics + defaultVersionName: 2.9.2_py36 + description: rpy2 is an interface to R running embedded in a Python process. + package: py-rpy2 + url: https://rpy2.bitbucket.io versions: - - description: Torch is a scientific computing framework with wide support for - machine learning algorithms that puts GPUs first. - markedDefault: false - properties: - arch: {gpu: 1} - versionName: '20180202' - - categories: math, technical computing - defaultVersionName: 13.1.0 - description: A symbolic language and platform for modern technical computing. - package: mathematica - url: http://www.wolfram.com/mathematica + - {description: rpy2 is an interface to R running embedded in a Python process., + markedDefault: false, versionName: 2.8.6_py27} + - {description: rpy2 is an interface to R running embedded in a Python process., + markedDefault: false, versionName: 2.9.2_py36} + - categories: math, numerical library + defaultVersionName: 2017.1_py27 + description: PyUblas provides a seamless glue layer between Numpy and Boost.Ublas + for use with Boost.Python. + package: py-pyublas + url: https://mathema.tician.de/software/pyublas/ versions: - - description: A symbolic language and platform for modern technical computing. - markedDefault: false - properties: - license: {restricted: 1} - versionName: 13.1.0 + - {description: PyUblas provides a seamless glue layer between Numpy and Boost.Ublas + for use with Boost.Python., markedDefault: false, versionName: 2017.1_py27} - categories: math, numerical library defaultVersionName: 0.3.10 description: OpenBLAS is an optimized BLAS library @@ -2697,16 +2755,17 @@ software_modules: versionName: 0.3.20} - {description: OpenBLAS is an optimized BLAS library, family: blas, markedDefault: true, versionName: 0.3.10} - - categories: math, statistics - defaultVersionName: 2.9.2_py36 - description: rpy2 is an interface to R running embedded in a Python process. - package: py-rpy2 - url: https://rpy2.bitbucket.io + - categories: math, numerical library + defaultVersionName: 7.4.0 + description: SuiteSparse is a suite of sparse matrix algorithms. + package: suitesparse + url: https://people.engr.tamu.edu/davis/suitesparse.html versions: - - {description: rpy2 is an interface to R running embedded in a Python process., - markedDefault: false, versionName: 2.8.6_py27} - - {description: rpy2 is an interface to R running embedded in a Python process., - markedDefault: false, versionName: 2.9.2_py36} + - description: SuiteSparse is a suite of sparse matrix algorithms. + markedDefault: false + properties: + arch: {gpu: 1} + versionName: 7.4.0 - categories: math, numerical library defaultVersionName: '2.7' description: The GNU Scientific Library (GSL) is a numerical library for C and @@ -2727,6 +2786,15 @@ software_modules: C and C++ programmers. The library provides a wide range of mathematical routines such as random number generators, special functions and least-squares fitting.', markedDefault: false, versionName: '2.7'} + - categories: math, numerical library + defaultVersionName: 1.1.2 + description: qrupdate is a Fortran library for fast updates of QR and Cholesky + decompositions. + package: qrupdate + url: https://sourceforge.net/projects/qrupdate/ + versions: + - {description: qrupdate is a Fortran library for fast updates of QR and Cholesky + decompositions., markedDefault: false, versionName: 1.1.2} - categories: math, computational geometry defaultVersionName: '4.10' description: polymake is open source software for research in polyhedral geometry. @@ -2735,33 +2803,14 @@ software_modules: versions: - {description: polymake is open source software for research in polyhedral geometry., markedDefault: false, versionName: '4.10'} - - categories: math, deep learning - defaultVersionName: 1.0.1_py27 - description: Theano is a Python library that allows you to define, optimize, - and evaluate mathematical expressions involving multi-dimensional arrays efficiently. - package: py-theano - url: http://deeplearning.net/software/theano - versions: - - description: Theano is a Python library that allows you to define, optimize, - and evaluate mathematical expressions involving multi-dimensional arrays - efficiently. - markedDefault: false - properties: - arch: {gpu: 1} - versionName: 1.0.1_py27 - - categories: math, linear algebra - defaultVersionName: 0.2.0.1 - description: NVIDIA cuSPARSELt is a high-performance CUDA library for sparse - matrix-matrix multiplication. - package: cusparselt - url: https://docs.nvidia.com/cuda/cusparselt/index.html + - categories: math, symbolic + defaultVersionName: 0.12.3_py39 + description: High-Performance Symbolic Regression in Python and Julia. + package: py-pysr + url: https://github.com/MilesCranmer/PySR versions: - - description: NVIDIA cuSPARSELt is a high-performance CUDA library for sparse - matrix-matrix multiplication. - markedDefault: false - properties: - arch: {gpu: 1} - versionName: 0.2.0.1 + - {description: High-Performance Symbolic Regression in Python and Julia., markedDefault: false, + versionName: 0.12.3_py39} - categories: math, deep learning defaultVersionName: 1.5.0.3 description: GPU-accelerated tensor linear algebra library. @@ -2778,15 +2827,20 @@ software_modules: properties: arch: {gpu: 1} versionName: 1.5.0.3 - - categories: math, numerical library - defaultVersionName: 1.1.2 - description: qrupdate is a Fortran library for fast updates of QR and Cholesky - decompositions. - package: qrupdate - url: https://sourceforge.net/projects/qrupdate/ + - categories: math, deep learning + defaultVersionName: 1.0.1_py27 + description: Theano is a Python library that allows you to define, optimize, + and evaluate mathematical expressions involving multi-dimensional arrays efficiently. + package: py-theano + url: http://deeplearning.net/software/theano versions: - - {description: qrupdate is a Fortran library for fast updates of QR and Cholesky - decompositions., markedDefault: false, versionName: 1.1.2} + - description: Theano is a Python library that allows you to define, optimize, + and evaluate mathematical expressions involving multi-dimensional arrays + efficiently. + markedDefault: false + properties: + arch: {gpu: 1} + versionName: 1.0.1_py27 - categories: math, numerical library defaultVersionName: 3.1.3 description: FlexiBLAS is a BLAS and LAPACK wrapper library with runtime exchangeable @@ -2813,15 +2867,19 @@ software_modules: versions: - {description: The MPI-IS Mesh Processing Library contains core functions for manipulating meshes and visualizing them., markedDefault: false, versionName: 0.4_py39} - - categories: math, deep learning - defaultVersionName: 0.15.1_py39 - description: Datasets, model architectures, and common image transformations - for computer vision for PyTorch. - package: py-torchvision - url: http://pytorch.org/vision + - categories: math, numerical library + defaultVersionName: 6.2.1 + description: GMP is a free library for arbitrary precision arithmetic, operating + on signed integers, rational numbers, and floating-point numbers. + package: gmp + url: https://gmplib.org versions: - - {description: 'Datasets, model architectures, and common image transformations - for computer vision for PyTorch.', markedDefault: false, versionName: 0.15.1_py39} + - {description: 'GMP is a free library for arbitrary precision arithmetic, operating + on signed integers, rational numbers, and floating-point numbers.', markedDefault: false, + versionName: 6.1.2} + - {description: 'GMP is a free library for arbitrary precision arithmetic, operating + on signed integers, rational numbers, and floating-point numbers.', markedDefault: false, + versionName: 6.2.1} - categories: math, topic modelling defaultVersionName: 4.2.0_py39 description: Gensim is a Python library for topic modelling, document indexing @@ -2832,20 +2890,12 @@ software_modules: - {description: 'Gensim is a Python library for topic modelling, document indexing and similarity retrieval with large corpora.', markedDefault: false, versionName: 4.2.0_py39} - categories: math, numerical library - defaultVersionName: 4.0.3 - description: ParMETIS is an MPI-based parallel library that implements a variety - of algorithms for partitioning unstructured graphs, meshes, and for computing - fill-reducing orderings of sparse matrices. - package: parmetis - url: http://glaros.dtc.umn.edu/gkhome/metis/parmetis/overview + defaultVersionName: 5.1.2 + description: A parallel sparse direct solver. + package: mumps + url: http://mumps.enseeiht.fr/ versions: - - description: ParMETIS is an MPI-based parallel library that implements a variety - of algorithms for partitioning unstructured graphs, meshes, and for computing - fill-reducing orderings of sparse matrices. - markedDefault: false - properties: - parallel: {mpi: 1} - versionName: 4.0.3 + - {description: A parallel sparse direct solver., markedDefault: false, versionName: 5.1.2} - categories: math, numerical library defaultVersionName: 3.9.0 description: Collection of Fortran77 subroutines designed to solve large scale @@ -2891,22 +2941,31 @@ software_modules: markedDefault: false properties: parallel: {mpi: 1} - versionName: 2.2.0 - - categories: math, symbolic - defaultVersionName: 0.12.3_py39 - description: High-Performance Symbolic Regression in Python and Julia. - package: py-pysr - url: https://github.com/MilesCranmer/PySR + versionName: 2.2.0 + - categories: math, deep learning + defaultVersionName: 0.15.1_py39 + description: Datasets, model architectures, and common image transformations + for computer vision for PyTorch. + package: py-torchvision + url: http://pytorch.org/vision versions: - - {description: High-Performance Symbolic Regression in Python and Julia., markedDefault: false, - versionName: 0.12.3_py39} + - {description: 'Datasets, model architectures, and common image transformations + for computer vision for PyTorch.', markedDefault: false, versionName: 0.15.1_py39} - categories: math, numerical library - defaultVersionName: 3.18.2_py39 - description: Python bindings for SLEPc. - package: py-slepc4py - url: https://slepc.upv.es/ + defaultVersionName: 4.0.3 + description: ParMETIS is an MPI-based parallel library that implements a variety + of algorithms for partitioning unstructured graphs, meshes, and for computing + fill-reducing orderings of sparse matrices. + package: parmetis + url: http://glaros.dtc.umn.edu/gkhome/metis/parmetis/overview versions: - - {description: Python bindings for SLEPc., markedDefault: false, versionName: 3.18.2_py39} + - description: ParMETIS is an MPI-based parallel library that implements a variety + of algorithms for partitioning unstructured graphs, meshes, and for computing + fill-reducing orderings of sparse matrices. + markedDefault: false + properties: + parallel: {mpi: 1} + versionName: 4.0.3 - categories: math, numerical library defaultVersionName: 3.3.10 description: The Fastest Fourier Transform in the West (FFTW) is a software @@ -3141,6 +3200,17 @@ software_modules: properties: license: {restricted: 1} versionName: '15' + - categories: math, optimization + defaultVersionName: 6.4.1 + description: SUNDIALS is a family of software packages providing robust and + efficient time integrators and nonlinear solvers that can easily be incorporated + into existing simulation codes. + package: sundials + url: https://github.com/LLNL/sundials + versions: + - {description: SUNDIALS is a family of software packages providing robust and + efficient time integrators and nonlinear solvers that can easily be incorporated + into existing simulation codes., markedDefault: false, versionName: 6.4.1} - categories: math, numerical library defaultVersionName: 3.1.0 description: BLIS is a portable software framework for instantiating high-performance @@ -3157,60 +3227,28 @@ software_modules: - {description: BLIS is a portable software framework for instantiating high-performance BLAS-like dense linear algebra libraries., family: blas, markedDefault: false, versionName: 3.1.0} - - categories: math, optimization - defaultVersionName: 6.4.1 - description: SUNDIALS is a family of software packages providing robust and - efficient time integrators and nonlinear solvers that can easily be incorporated - into existing simulation codes. - package: sundials - url: https://github.com/LLNL/sundials - versions: - - {description: SUNDIALS is a family of software packages providing robust and - efficient time integrators and nonlinear solvers that can easily be incorporated - into existing simulation codes., markedDefault: false, versionName: 6.4.1} - - categories: math, deep learning - defaultVersionName: 2.1.5_py27 - description: Keras is a high-level neural networks API, written in Python and - capable of running on top of TensorFlow, CNTK, or Theano. - package: py-keras - url: http://keras.io + - categories: math, numerical library + defaultVersionName: 3.18.5 + description: PETSc, the Portable, Extensible Toolkit for Scientific Computation, + is a suite of data structures and routines for the scalable (parallel) solution + of scientific applications modeled by partial differential equations. + package: petsc + url: http://petsc.org versions: - - description: Keras is a high-level neural networks API, written in Python - and capable of running on top of TensorFlow, CNTK, or Theano. - markedDefault: false - properties: - arch: {gpu: 1} - versionName: 2.0.8_py27 - - description: Keras is a high-level neural networks API, written in Python - and capable of running on top of TensorFlow, CNTK, or Theano. - markedDefault: false - properties: - arch: {gpu: 1} - versionName: 2.1.5_py36 - - description: Keras is a high-level neural networks API, written in Python - and capable of running on top of TensorFlow, CNTK, or Theano. - markedDefault: false - properties: - arch: {gpu: 1} - versionName: 2.2.4_py27 - - description: Keras is a high-level neural networks API, written in Python - and capable of running on top of TensorFlow, CNTK, or Theano. + - description: PETSc is a suite of data structures and routines for the scalable + (parallel) solution of scientific applications modeled by partial differential + equations. markedDefault: false properties: - arch: {gpu: 1} - versionName: 2.2.4_py36 - - description: Keras is a high-level neural networks API, written in Python - and capable of running on top of TensorFlow, CNTK, or Theano. + parallel: {mpi: 1} + versionName: 3.10.3 + - description: PETSc, the Portable, Extensible Toolkit for Scientific Computation, + is a suite of data structures and routines for the scalable (parallel) solution + of scientific applications modeled by partial differential equations. markedDefault: false properties: - arch: {gpu: 1} - versionName: 2.3.1_py36 - - description: Keras is a high-level neural networks API, written in Python - and capable of running on top of TensorFlow, CNTK, or Theano. - markedDefault: true - properties: - arch: {gpu: 1} - versionName: 2.1.5_py27 + parallel: {mpi: 1} + versionName: 3.18.5 - categories: math, numerical library defaultVersionName: 2.0.8_py36 description: gmpy2 is a C-coded Python extension module that supports multiple-precision @@ -3281,32 +3319,30 @@ software_modules: properties: license: {restricted: 1} versionName: R2022b - - categories: math, optimization - defaultVersionName: 10.0.1_py39 - description: The Gurobi Optimizer is a commercial optimization solver for mathematical - programming. - package: gurobi - url: http://www.gurobi.com + - categories: math, statistics + defaultVersionName: '9.4' + description: SAS is a software suite developed by SAS Institute for advanced + analytics, multivariate analyses, business intelligence, data management, + and predictive analytics. + package: sas + url: http://www.sas.com/ versions: - - {description: The Gurobi Optimizer is a commercial optimization solver for - mathematical programming., markedDefault: false, versionName: 7.5.1} - - {description: The Gurobi Optimizer is a commercial optimization solver for - mathematical programming., markedDefault: false, versionName: 8.0.1_py27} - - {description: The Gurobi Optimizer is a commercial optimization solver for - mathematical programming., markedDefault: false, versionName: 8.0.1_py36} - - {description: The Gurobi Optimizer is a commercial optimization solver for - mathematical programming., markedDefault: false, versionName: 9.0.3_py36} - - {description: The Gurobi Optimizer is a commercial optimization solver for - mathematical programming., markedDefault: false, versionName: 10.0.1_py39} - - categories: math, computational geometry - defaultVersionName: 7.6.2 - description: Open CASCADE Technology (OCCT) is an open-source full-scale 3D - geometry library - package: opencascade - url: https://dev.opencascade.org/ + - description: SAS is a software suite developed by SAS Institute for advanced + analytics, multivariate analyses, business intelligence, data management, + and predictive analytics. + markedDefault: false + properties: + license: {restricted: 1} + versionName: '9.4' + - categories: math, numerical library + defaultVersionName: 3.18.5_py39 + description: Python bindings for PETSc, the Portable, Extensible Toolkit for + Scientific Computation. + package: py-petsc4py + url: http://petsc.org versions: - - {description: Open CASCADE Technology (OCCT) is an open-source full-scale - 3D geometry library, markedDefault: false, versionName: 7.6.2} + - {description: 'Python bindings for PETSc, the Portable, Extensible Toolkit + for Scientific Computation.', markedDefault: false, versionName: 3.18.5_py39} - categories: math, numerical analysis defaultVersionName: 4.2.1 description: GNU Octave is a high-level language primarily intended for numerical @@ -3366,76 +3402,60 @@ software_modules: properties: arch: {gpu: 1} versionName: 12.1.0_py39 - - categories: math, numerical library - defaultVersionName: 5.1.2 - description: A parallel sparse direct solver. - package: mumps - url: http://mumps.enseeiht.fr/ + - categories: math, computational geometry + defaultVersionName: 7.6.2 + description: Open CASCADE Technology (OCCT) is an open-source full-scale 3D + geometry library + package: opencascade + url: https://dev.opencascade.org/ versions: - - {description: A parallel sparse direct solver., markedDefault: false, versionName: 5.1.2} - - categories: math, numerical library - defaultVersionName: 1.14.3_py27 - description: NumPy is the fundamental package for scientific computing with - Python. - package: py-numpy - url: http://www.numpy.org + - {description: Open CASCADE Technology (OCCT) is an open-source full-scale + 3D geometry library, markedDefault: false, versionName: 7.6.2} + - categories: math, symbolic + defaultVersionName: 5.47.0 + description: Maxima is a system for the manipulation of symbolic and numerical + expressions. + package: maxima + url: https://maxima.sourceforge.io/ + versions: + - {description: Maxima is a system for the manipulation of symbolic and numerical + expressions., markedDefault: false, versionName: 5.47.0} + - categories: math, optimization + defaultVersionName: 10.0.1_py39 + description: The Gurobi Optimizer is a commercial optimization solver for mathematical + programming. + package: gurobi + url: http://www.gurobi.com versions: - - {description: NumPy is the fundamental package for scientific computing with - Python., markedDefault: false, versionName: 1.14.3_py36} - - {description: NumPy is the fundamental package for scientific computing with - Python., markedDefault: false, versionName: 1.17.2_py36} - - {description: NumPy is the fundamental package for scientific computing with - Python., markedDefault: false, versionName: 1.18.1_py36} - - {description: NumPy is the fundamental package for scientific computing with - Python., markedDefault: false, versionName: 1.19.2_py36} - - {description: NumPy is the fundamental package for scientific computing with - Python., markedDefault: false, versionName: 1.20.3_py39} - - {description: NumPy is the fundamental package for scientific computing with - Python., markedDefault: false, versionName: 1.24.2_py39} - - {description: NumPy is the fundamental package for scientific computing with - Python., markedDefault: true, versionName: 1.14.3_py27} - - categories: math, statistics - defaultVersionName: '9.4' - description: SAS is a software suite developed by SAS Institute for advanced - analytics, multivariate analyses, business intelligence, data management, - and predictive analytics. - package: sas - url: http://www.sas.com/ + - {description: The Gurobi Optimizer is a commercial optimization solver for + mathematical programming., markedDefault: false, versionName: 7.5.1} + - {description: The Gurobi Optimizer is a commercial optimization solver for + mathematical programming., markedDefault: false, versionName: 8.0.1_py27} + - {description: The Gurobi Optimizer is a commercial optimization solver for + mathematical programming., markedDefault: false, versionName: 8.0.1_py36} + - {description: The Gurobi Optimizer is a commercial optimization solver for + mathematical programming., markedDefault: false, versionName: 9.0.3_py36} + - {description: The Gurobi Optimizer is a commercial optimization solver for + mathematical programming., markedDefault: false, versionName: 10.0.1_py39} + - categories: math, deep learning + defaultVersionName: 1.8_py27 + description: TensorboardX is TensorBoard™ for PyTorch (and Chainer, MXNet, NumPy...) + package: py-tensorboardx + url: https://tensorboardx.readthedocs.io versions: - - description: SAS is a software suite developed by SAS Institute for advanced - analytics, multivariate analyses, business intelligence, data management, - and predictive analytics. + - description: TensorboardX is TensorBoard™ for PyTorch (and Chainer, MXNet, + NumPy...) markedDefault: false properties: - license: {restricted: 1} - versionName: '9.4' - - categories: math, machine learning - defaultVersionName: 0.19.1_py27 - description: Scikit-learn is a free software machine learning library for the - Python programming language. - package: py-scikit-learn - url: http://scikit-learn.org - versions: - - {description: Scikit-learn is a free software machine learning library for - the Python programming language., markedDefault: false, versionName: 0.19.1_py36} - - {description: Scikit-learn is a free software machine learning library for - the Python programming language., markedDefault: false, versionName: 0.24.2_py36} - - {description: Scikit-learn is a free software machine learning library for - the Python programming language., markedDefault: false, versionName: 1.0.2_py39} - - {description: Scikit-learn is a free software machine learning library for - the Python programming language., markedDefault: false, versionName: 1.3.2_py39} - - {description: Scikit-learn is a free software machine learning library for - the Python programming language., markedDefault: true, versionName: 0.19.1_py27} - - categories: math, optimization - defaultVersionName: 2.10.0_py39 - description: Optuna is an automatic hyperparameter optimization software framework, - particularly designed for machine learning. - package: py-optuna - url: https://optuna.readthedocs.io/ + arch: {gpu: 1} + versionName: 1.8_py27 + - categories: math, numerical library + defaultVersionName: 3.18.2_py39 + description: Python bindings for SLEPc. + package: py-slepc4py + url: https://slepc.upv.es/ versions: - - {description: 'Optuna is an automatic hyperparameter optimization software - framework, particularly designed for machine learning.', markedDefault: false, - versionName: 2.10.0_py39} + - {description: Python bindings for SLEPc., markedDefault: false, versionName: 3.18.2_py39} - categories: math, numerical library defaultVersionName: '2019' description: Intel Math Kernel Library (Intel MKL) is a library of optimized diff --git a/src/docs/software/updates.xml b/src/docs/software/updates.xml index 37faf36f0..c3af967e7 100644 --- a/src/docs/software/updates.xml +++ b/src/docs/software/updates.xml @@ -5,6 +5,24 @@ Sherlock software update feed https://www.sherlock.stanford.edu/docs/software/list + + New module: math/suitesparse version 7.4.0 + SuiteSparse is a suite of sparse matrix algorithms. + https://people.engr.tamu.edu/davis/suitesparse.html + https://www.sherlock.stanford.edu/docs/software/list/?add:v=7.4.0#suitesparse + math, numerical library + kilian@stanford.edu (Kilian Cavalotti) + Tue, 9 Jan 2024 14:01:12 -0800 + + + New module: math/maxima version 5.47.0 + Maxima is a system for the manipulation of symbolic and numerical expressions. + https://maxima.sourceforge.io/ + https://www.sherlock.stanford.edu/docs/software/list/?add:v=5.47.0#maxima + math, symbolic + kilian@stanford.edu (Kilian Cavalotti) + Tue, 9 Jan 2024 12:01:51 -0800 + New version: devel/julia version 1.10.0 Julia is a high-level, high-performance dynamic programming language for numerical computing.