diff --git a/includes/data/software.yml b/includes/data/software.yml
index 6b55959de..97a13a38d 100644
--- a/includes/data/software.yml
+++ b/includes/data/software.yml
@@ -2355,62 +2355,15 @@ software_modules:
R. It includes a console, syntax-highlighting editor that supports direct
code execution, as well as tools for plotting, history, debugging and workspace
management.', markedDefault: true, versionName: 1.3.1093}
- - categories: math, numerical analysis
- defaultVersionName: R2022b
- description: MATLAB is a multi-paradigm numerical computing environment and
- proprietary programming language developed by MathWorks.
- package: matlab
- url: https://www.mathworks.com/products/matlab.html
+ - categories: math, computational geometry
+ defaultVersionName: 7.6.2
+ description: Open CASCADE Technology (OCCT) is an open-source full-scale 3D
+ geometry library
+ package: opencascade
+ url: https://dev.opencascade.org/
versions:
- - description: MATLAB is a multi-paradigm numerical computing environment and
- proprietary programming language developed by MathWorks.
- help: https://www.sherlock.stanford.edu/docs/software/using/matlab
- markedDefault: false
- properties:
- license: {restricted: 1}
- versionName: R2017a
- - description: MATLAB is a multi-paradigm numerical computing environment and
- proprietary programming language developed by MathWorks.
- help: https://www.sherlock.stanford.edu/docs/software/using/matlab
- markedDefault: false
- properties:
- license: {restricted: 1}
- versionName: R2017b
- - description: MATLAB is a multi-paradigm numerical computing environment and
- proprietary programming language developed by MathWorks.
- help: https://www.sherlock.stanford.edu/docs/software/using/matlab
- markedDefault: false
- properties:
- license: {restricted: 1}
- versionName: R2018a
- - description: MATLAB is a multi-paradigm numerical computing environment and
- proprietary programming language developed by MathWorks.
- help: https://www.sherlock.stanford.edu/docs/software/using/matlab
- markedDefault: false
- properties:
- license: {restricted: 1}
- versionName: R2019a
- - description: MATLAB is a multi-paradigm numerical computing environment and
- proprietary programming language developed by MathWorks.
- help: https://www.sherlock.stanford.edu/docs/software/using/matlab
- markedDefault: false
- properties:
- license: {restricted: 1}
- versionName: R2020a
- - description: MATLAB is a multi-paradigm numerical computing environment and
- proprietary programming language developed by MathWorks.
- help: https://www.sherlock.stanford.edu/docs/software/using/matlab
- markedDefault: false
- properties:
- license: {restricted: 1}
- versionName: R2023b
- - description: MATLAB is a multi-paradigm numerical computing environment and
- proprietary programming language developed by MathWorks.
- help: https://www.sherlock.stanford.edu/docs/software/using/matlab
- markedDefault: true
- properties:
- license: {restricted: 1}
- versionName: R2022b
+ - {description: Open CASCADE Technology (OCCT) is an open-source full-scale
+ 3D geometry library, markedDefault: false, versionName: 7.6.2}
- categories: math, optimization
defaultVersionName: 3.3.0
description: Octeract Engine is a proprietary massively parallel deterministic
@@ -2568,17 +2521,43 @@ software_modules:
- {description: Hugging Face Transformers provides APIs and tools to easily
download and train state-of-the-art pretrained models., markedDefault: false,
versionName: 4.39.1_py312}
+ - categories: math, optimization
+ defaultVersionName: 2.10.0_py39
+ description: Optuna is an automatic hyperparameter optimization software framework,
+ particularly designed for machine learning.
+ package: py-optuna
+ url: https://optuna.readthedocs.io/
+ versions:
+ - {description: 'Optuna is an automatic hyperparameter optimization software
+ framework, particularly designed for machine learning.', markedDefault: false,
+ versionName: 2.10.0_py39}
- categories: math, numerical library
- defaultVersionName: 1.6.0
- description: TetGen provides various features to generate good quality and adaptive
- tetrahedral meshes suitable for numerical methods, such as finite element
- or finite volume methods.
- package: tetgen
- url: http://wias-berlin.de/software/index.jsp?id=TetGen
+ defaultVersionName: 1.0.248
+ description: Extra precise basic linear algebra subroutines.
+ package: xblas
+ url: http://www.netlib.org/xblas
versions:
- - {description: 'TetGen provides various features to generate good quality and
- adaptive tetrahedral meshes suitable for numerical methods, such as finite
- element or finite volume methods.', markedDefault: false, versionName: 1.6.0}
+ - {description: Extra precise basic linear algebra subroutines., markedDefault: false,
+ versionName: 1.0.248}
+ - categories: math, machine learning
+ defaultVersionName: 0.19.1_py27
+ description: Scikit-learn is a free software machine learning library for the
+ Python programming language.
+ package: py-scikit-learn
+ url: http://scikit-learn.org
+ versions:
+ - {description: Scikit-learn is a free software machine learning library for
+ the Python programming language., markedDefault: false, versionName: 0.19.1_py36}
+ - {description: Scikit-learn is a free software machine learning library for
+ the Python programming language., markedDefault: false, versionName: 0.24.2_py36}
+ - {description: Scikit-learn is a free software machine learning library for
+ the Python programming language., markedDefault: false, versionName: 1.0.2_py39}
+ - {description: Scikit-learn is a free software machine learning library for
+ the Python programming language., markedDefault: false, versionName: 1.3.2_py39}
+ - {description: Scikit-learn is a free software machine learning library for
+ the Python programming language., markedDefault: false, versionName: 1.5.1_py312}
+ - {description: Scikit-learn is a free software machine learning library for
+ the Python programming language., markedDefault: true, versionName: 0.19.1_py27}
- categories: math, statistics
defaultVersionName: 4.3.1
description: Just another Gibbs sampler (JAGS) is a program for simulation from
@@ -2592,26 +2571,67 @@ software_modules:
- {description: Just another Gibbs sampler (JAGS) is a program for simulation
from Bayesian hierarchical models using Markov chain Monte Carlo (MCMC).,
markedDefault: false, versionName: 4.3.1}
+ - categories: math, deep learning
+ defaultVersionName: 2.6.3_py312
+ description: Fast and memory-efficient exact attention
+ package: py-flash-attention
+ url: https://github.com/Dao-AILab/flash-attention
+ versions:
+ - description: Fast and memory-efficient exact attention
+ markedDefault: false
+ properties:
+ arch: {gpu: 1}
+ versionName: 2.6.3_py312
- categories: math, numerical library
- defaultVersionName: 1.0.248
- description: Extra precise basic linear algebra subroutines.
- package: xblas
- url: http://www.netlib.org/xblas
+ defaultVersionName: 1.14.3_py27
+ description: NumPy is the fundamental package for scientific computing with
+ Python.
+ package: py-numpy
+ url: http://www.numpy.org
versions:
- - {description: Extra precise basic linear algebra subroutines., markedDefault: false,
- versionName: 1.0.248}
+ - {description: NumPy is the fundamental package for scientific computing with
+ Python., markedDefault: false, versionName: 1.14.3_py36}
+ - {description: NumPy is the fundamental package for scientific computing with
+ Python., markedDefault: false, versionName: 1.17.2_py36}
+ - {description: NumPy is the fundamental package for scientific computing with
+ Python., markedDefault: false, versionName: 1.18.1_py36}
+ - {description: NumPy is the fundamental package for scientific computing with
+ Python., markedDefault: false, versionName: 1.19.2_py36}
+ - {description: NumPy is the fundamental package for scientific computing with
+ Python., markedDefault: false, versionName: 1.20.3_py39}
+ - {description: NumPy is the fundamental package for scientific computing with
+ Python., markedDefault: false, versionName: 1.24.2_py39}
+ - {description: NumPy is the fundamental package for scientific computing with
+ Python., markedDefault: false, versionName: 1.26.3_py312}
+ - {description: NumPy is the fundamental package for scientific computing with
+ Python., markedDefault: true, versionName: 1.14.3_py27}
- categories: math, deep learning
- defaultVersionName: 1.8_py27
- description: TensorboardX is TensorBoard™ for PyTorch (and Chainer, MXNet, NumPy...)
- package: py-tensorboardx
- url: https://tensorboardx.readthedocs.io
+ defaultVersionName: 10.0.1_py312
+ description: Python bindings for the TensorRT library.
+ package: py-tensorrt
+ url: https://developer.nvidia.com/tensorrt
versions:
- - description: TensorboardX is TensorBoard™ for PyTorch (and Chainer, MXNet,
- NumPy...)
+ - description: Python bindings for the TensorRT library.
markedDefault: false
properties:
arch: {gpu: 1}
- versionName: 1.8_py27
+ versionName: 8.5.1.7_py39
+ - description: Python bindings for the TensorRT library.
+ markedDefault: false
+ properties:
+ arch: {gpu: 1}
+ versionName: 10.0.1_py312
+ - categories: math, numerical library
+ defaultVersionName: 1.4.1
+ description: 'harminv is a program designed to solve the problem of harmonic
+ inversion: given a time series consisting of a sum of sinusoids (modes), extract
+ their frequencies and amplitudes.'
+ package: harminv
+ url: https://github.com/stevengj/harminv
+ versions:
+ - {description: 'harminv is a program designed to solve the problem of harmonic
+ inversion: given a time series consisting of a sum of sinusoids (modes),
+ extract their frequencies and amplitudes.', markedDefault: false, versionName: 1.4.1}
- categories: math, deep learning
defaultVersionName: 0.12.1_py27
description: Horovod is a distributed training framework for TensorFlow. The
@@ -2633,26 +2653,6 @@ software_modules:
arch: {gpu: 1}
parallel: {mpi: 1}
versionName: 0.12.1_py27
- - categories: math, numerical library
- defaultVersionName: 1.4.1
- description: 'harminv is a program designed to solve the problem of harmonic
- inversion: given a time series consisting of a sum of sinusoids (modes), extract
- their frequencies and amplitudes.'
- package: harminv
- url: https://github.com/stevengj/harminv
- versions:
- - {description: 'harminv is a program designed to solve the problem of harmonic
- inversion: given a time series consisting of a sum of sinusoids (modes),
- extract their frequencies and amplitudes.', markedDefault: false, versionName: 1.4.1}
- - categories: math, deep learning
- defaultVersionName: 0.21.0_py39
- description: Gym is a toolkit for developing and comparing reinforcement learning
- algorithms.
- package: py-gym
- url: https://gym.openai.com/
- versions:
- - {description: Gym is a toolkit for developing and comparing reinforcement
- learning algorithms., markedDefault: false, versionName: 0.21.0_py39}
- categories: math, numerical library
defaultVersionName: 5.1.0
description: METIS is a set of serial programs for partitioning graphs, partitioning
@@ -2730,22 +2730,17 @@ software_modules:
properties:
arch: {gpu: 1}
versionName: 2.1.0_py36
- - categories: math, deep learning
- defaultVersionName: 10.0.1_py312
- description: Python bindings for the TensorRT library.
- package: py-tensorrt
- url: https://developer.nvidia.com/tensorrt
+ - categories: math, linear algebra
+ defaultVersionName: 8.200.1
+ description: Armadillo is a high quality linear algebra library (matrix maths)
+ for the C++ language, aiming towards a good balance between speed and ease
+ of use.
+ package: armadillo
+ url: http://arma.sourceforge.net/
versions:
- - description: Python bindings for the TensorRT library.
- markedDefault: false
- properties:
- arch: {gpu: 1}
- versionName: 8.5.1.7_py39
- - description: Python bindings for the TensorRT library.
- markedDefault: false
- properties:
- arch: {gpu: 1}
- versionName: 10.0.1_py312
+ - {description: 'Armadillo is a high quality linear algebra library (matrix
+ maths) for the C++ language, aiming towards a good balance between speed
+ and ease of use.', markedDefault: false, versionName: 8.200.1}
- categories: math, machine learning
defaultVersionName: 0.29.3_py312
description: Huggingface Accelerate is a library that enables the same PyTorch
@@ -2769,32 +2764,18 @@ software_modules:
- {description: LIBXSMM is a library for small dense and small sparse matrix-matrix
multiplications as well as for deep learning primitives such as small convolutions,
markedDefault: false, versionName: '1.17'}
- - categories: math, linear algebra
- defaultVersionName: 8.200.1
- description: Armadillo is a high quality linear algebra library (matrix maths)
- for the C++ language, aiming towards a good balance between speed and ease
- of use.
- package: armadillo
- url: http://arma.sourceforge.net/
- versions:
- - {description: 'Armadillo is a high quality linear algebra library (matrix
- maths) for the C++ language, aiming towards a good balance between speed
- and ease of use.', markedDefault: false, versionName: 8.200.1}
- - categories: math, numerical library
- defaultVersionName: 3.18.2_py39
- description: Python bindings for SLEPc.
- package: py-slepc4py
- url: https://slepc.upv.es/
- versions:
- - {description: Python bindings for SLEPc., markedDefault: false, versionName: 3.18.2_py39}
- - categories: math, numerical library
- defaultVersionName: 3.1.2_py39
- description: Efficient matrix representations for working with tabular data.
- package: py-tabmat
- url: https://github.com/Quantco/tabmat
+ - categories: math, deep learning
+ defaultVersionName: 1.8_py27
+ description: TensorboardX is TensorBoard™ for PyTorch (and Chainer, MXNet, NumPy...)
+ package: py-tensorboardx
+ url: https://tensorboardx.readthedocs.io
versions:
- - {description: Efficient matrix representations for working with tabular data.,
- markedDefault: false, versionName: 3.1.2_py39}
+ - description: TensorboardX is TensorBoard™ for PyTorch (and Chainer, MXNet,
+ NumPy...)
+ markedDefault: false
+ properties:
+ arch: {gpu: 1}
+ versionName: 1.8_py27
- categories: math, deep learning
defaultVersionName: '20180202'
description: Torch is a scientific computing framework with wide support for
@@ -2808,23 +2789,14 @@ software_modules:
properties:
arch: {gpu: 1}
versionName: '20180202'
- - categories: math, optimization
- defaultVersionName: 2.6.2
- description: NLopt is a free/open-source library for nonlinear optimization.
- package: nlopt
- url: https://nlopt.readthedocs.io/
- versions:
- - {description: NLopt is a free/open-source library for nonlinear optimization.,
- markedDefault: false, versionName: 2.6.2}
- categories: math, numerical library
- defaultVersionName: 3.18.5_py39
- description: Python bindings for PETSc, the Portable, Extensible Toolkit for
- Scientific Computation.
- package: py-petsc4py
- url: http://petsc.org
+ defaultVersionName: 3.1.2_py39
+ description: Efficient matrix representations for working with tabular data.
+ package: py-tabmat
+ url: https://github.com/Quantco/tabmat
versions:
- - {description: 'Python bindings for PETSc, the Portable, Extensible Toolkit
- for Scientific Computation.', markedDefault: false, versionName: 3.18.5_py39}
+ - {description: Efficient matrix representations for working with tabular data.,
+ markedDefault: false, versionName: 3.1.2_py39}
- categories: math, computational geometry
defaultVersionName: '4.10'
description: polymake is open source software for research in polyhedral geometry.
@@ -2833,15 +2805,23 @@ software_modules:
versions:
- {description: polymake is open source software for research in polyhedral
geometry., markedDefault: false, versionName: '4.10'}
- - categories: math, numerical library
- defaultVersionName: 2017.1_py27
- description: PyUblas provides a seamless glue layer between Numpy and Boost.Ublas
- for use with Boost.Python.
- package: py-pyublas
- url: https://mathema.tician.de/software/pyublas/
+ - categories: math, optimization
+ defaultVersionName: 2.6.2
+ description: NLopt is a free/open-source library for nonlinear optimization.
+ package: nlopt
+ url: https://nlopt.readthedocs.io/
versions:
- - {description: PyUblas provides a seamless glue layer between Numpy and Boost.Ublas
- for use with Boost.Python., markedDefault: false, versionName: 2017.1_py27}
+ - {description: NLopt is a free/open-source library for nonlinear optimization.,
+ markedDefault: false, versionName: 2.6.2}
+ - categories: math, deep learning
+ defaultVersionName: 0.21.0_py39
+ description: Gym is a toolkit for developing and comparing reinforcement learning
+ algorithms.
+ package: py-gym
+ url: https://gym.openai.com/
+ versions:
+ - {description: Gym is a toolkit for developing and comparing reinforcement
+ learning algorithms., markedDefault: false, versionName: 0.21.0_py39}
- categories: math, symbolic
defaultVersionName: 5.47.0
description: Maxima is a system for the manipulation of symbolic and numerical
@@ -2852,14 +2832,44 @@ software_modules:
- {description: Maxima is a system for the manipulation of symbolic and numerical
expressions., markedDefault: false, versionName: 5.47.0}
- categories: math, numerical library
- defaultVersionName: 2.0.8_py36
- description: gmpy2 is a C-coded Python extension module that supports multiple-precision
- arithmetic.
- package: py-gmpy2
- url: https://gmpy2.readthedocs.io/
+ defaultVersionName: 4.0.3
+ description: ParMETIS is an MPI-based parallel library that implements a variety
+ of algorithms for partitioning unstructured graphs, meshes, and for computing
+ fill-reducing orderings of sparse matrices.
+ package: parmetis
+ url: http://glaros.dtc.umn.edu/gkhome/metis/parmetis/overview
versions:
- - {description: gmpy2 is a C-coded Python extension module that supports multiple-precision
- arithmetic., markedDefault: false, versionName: 2.0.8_py36}
+ - description: ParMETIS is an MPI-based parallel library that implements a variety
+ of algorithms for partitioning unstructured graphs, meshes, and for computing
+ fill-reducing orderings of sparse matrices.
+ markedDefault: false
+ properties:
+ parallel: {mpi: 1}
+ versionName: 4.0.3
+ - categories: math, linear algebra
+ defaultVersionName: 0.2.0.1
+ description: NVIDIA cuSPARSELt is a high-performance CUDA library for sparse
+ matrix-matrix multiplication.
+ package: cusparselt
+ url: https://docs.nvidia.com/cuda/cusparselt/index.html
+ versions:
+ - description: NVIDIA cuSPARSELt is a high-performance CUDA library for sparse
+ matrix-matrix multiplication.
+ markedDefault: false
+ properties:
+ arch: {gpu: 1}
+ versionName: 0.2.0.1
+ - categories: math, technical computing
+ defaultVersionName: 13.1.0
+ description: A symbolic language and platform for modern technical computing.
+ package: mathematica
+ url: http://www.wolfram.com/mathematica
+ versions:
+ - description: A symbolic language and platform for modern technical computing.
+ markedDefault: false
+ properties:
+ license: {restricted: 1}
+ versionName: 13.1.0
- categories: math, numerical library
defaultVersionName: 4.1.0
description: The MPFR library is a C library for multiple-precision floating-point
@@ -2879,28 +2889,6 @@ software_modules:
versions:
- {description: 'glum is a fast, modern, Python-first GLM estimation library.',
markedDefault: false, versionName: 2.1.2_py39}
- - categories: math, linear algebra
- defaultVersionName: 0.2.0.1
- description: NVIDIA cuSPARSELt is a high-performance CUDA library for sparse
- matrix-matrix multiplication.
- package: cusparselt
- url: https://docs.nvidia.com/cuda/cusparselt/index.html
- versions:
- - description: NVIDIA cuSPARSELt is a high-performance CUDA library for sparse
- matrix-matrix multiplication.
- markedDefault: false
- properties:
- arch: {gpu: 1}
- versionName: 0.2.0.1
- - categories: math, graph computing
- defaultVersionName: '0.73'
- description: A tool for computing automorphism groups and canonical forms of
- graphs.
- package: bliss
- url: http://www.tcs.hut.fi/Software/bliss/
- versions:
- - {description: A tool for computing automorphism groups and canonical forms
- of graphs., markedDefault: false, versionName: '0.73'}
- categories: math, numerical library
defaultVersionName: 3.1.0
description: libflame is a portable library for dense matrix computations, providing
@@ -2917,15 +2905,45 @@ software_modules:
- {description: 'libflame is a portable library for dense matrix computations,
providing much of the functionality present in LAPACK', markedDefault: false,
versionName: 3.1.0}
- - categories: math, computational geometry
- defaultVersionName: 7.6.2
- description: Open CASCADE Technology (OCCT) is an open-source full-scale 3D
- geometry library
- package: opencascade
- url: https://dev.opencascade.org/
+ - categories: math, statistics
+ defaultVersionName: 2.9.2_py36
+ description: rpy2 is an interface to R running embedded in a Python process.
+ package: py-rpy2
+ url: https://rpy2.github.io
versions:
- - {description: Open CASCADE Technology (OCCT) is an open-source full-scale
- 3D geometry library, markedDefault: false, versionName: 7.6.2}
+ - {description: rpy2 is an interface to R running embedded in a Python process.,
+ markedDefault: false, versionName: 2.8.6_py27}
+ - {description: rpy2 is an interface to R running embedded in a Python process.,
+ markedDefault: false, versionName: 2.9.2_py36}
+ - categories: math, numerical library
+ defaultVersionName: 0.3.10
+ description: OpenBLAS is an optimized BLAS library
+ package: openblas
+ url: http://www.openblas.net/
+ versions:
+ - {description: OpenBLAS is an optimized BLAS library, family: blas, markedDefault: false,
+ versionName: 0.2.19}
+ - {description: OpenBLAS is an optimized BLAS library, family: blas, markedDefault: false,
+ versionName: 0.3.4}
+ - {description: OpenBLAS is an optimized BLAS library, family: blas, markedDefault: false,
+ versionName: 0.3.9}
+ - {description: OpenBLAS is an optimized BLAS library, family: blas, markedDefault: false,
+ versionName: 0.3.20}
+ - {description: OpenBLAS is an optimized BLAS library, family: blas, markedDefault: false,
+ versionName: 0.3.26}
+ - {description: OpenBLAS is an optimized BLAS library, family: blas, markedDefault: false,
+ versionName: 0.3.28}
+ - {description: OpenBLAS is an optimized BLAS library, family: blas, markedDefault: true,
+ versionName: 0.3.10}
+ - categories: math, numerical analysis
+ defaultVersionName: 4.2.1
+ description: GNU Octave is a high-level language primarily intended for numerical
+ computations.
+ package: octave
+ url: https://www.gnu.org/software/octave/
+ versions:
+ - {description: GNU Octave is a high-level language primarily intended for numerical
+ computations., markedDefault: false, versionName: 4.2.1}
- categories: math, statistics
defaultVersionName: '1.3'
description: GNU datamash is a command-line program which performs basic numeric,
@@ -2997,37 +3015,24 @@ software_modules:
- {description: The SciPy library provides many user-friendly and efficient
numerical routines such as routines for numerical integration and optimization.,
family: scipy, markedDefault: true, versionName: 1.1.0_py27}
- - categories: math, technical computing
- defaultVersionName: 13.1.0
- description: A symbolic language and platform for modern technical computing.
- package: mathematica
- url: http://www.wolfram.com/mathematica
- versions:
- - description: A symbolic language and platform for modern technical computing.
- markedDefault: false
- properties:
- license: {restricted: 1}
- versionName: 13.1.0
- categories: math, numerical library
- defaultVersionName: 0.3.10
- description: OpenBLAS is an optimized BLAS library
- package: openblas
- url: http://www.openblas.net/
+ defaultVersionName: 2017.1_py27
+ description: PyUblas provides a seamless glue layer between Numpy and Boost.Ublas
+ for use with Boost.Python.
+ package: py-pyublas
+ url: https://mathema.tician.de/software/pyublas/
versions:
- - {description: OpenBLAS is an optimized BLAS library, family: blas, markedDefault: false,
- versionName: 0.2.19}
- - {description: OpenBLAS is an optimized BLAS library, family: blas, markedDefault: false,
- versionName: 0.3.4}
- - {description: OpenBLAS is an optimized BLAS library, family: blas, markedDefault: false,
- versionName: 0.3.9}
- - {description: OpenBLAS is an optimized BLAS library, family: blas, markedDefault: false,
- versionName: 0.3.20}
- - {description: OpenBLAS is an optimized BLAS library, family: blas, markedDefault: false,
- versionName: 0.3.26}
- - {description: OpenBLAS is an optimized BLAS library, family: blas, markedDefault: false,
- versionName: 0.3.28}
- - {description: OpenBLAS is an optimized BLAS library, family: blas, markedDefault: true,
- versionName: 0.3.10}
+ - {description: PyUblas provides a seamless glue layer between Numpy and Boost.Ublas
+ for use with Boost.Python., markedDefault: false, versionName: 2017.1_py27}
+ - categories: math, machine learning
+ defaultVersionName: 0.4.3_py312
+ description: Hugging Face Evaluate is a library for easily evaluating machine
+ learning models and datasets.
+ package: py-evaluate
+ url: https://huggingface.co/docs/evaluate
+ versions:
+ - {description: Hugging Face Evaluate is a library for easily evaluating machine
+ learning models and datasets., markedDefault: false, versionName: 0.4.3_py312}
- categories: math, numerical library
defaultVersionName: 5.1.2
description: A parallel sparse direct solver.
@@ -3055,70 +3060,46 @@ software_modules:
C and C++ programmers. The library provides a wide range of mathematical
routines such as random number generators, special functions and least-squares
fitting.', markedDefault: false, versionName: '2.7'}
- - categories: math, machine learning
- defaultVersionName: 2.18.0_py312
- description: Hugging Face Datasets is a library for easily accessing and sharing
- datasets for Audio, Computer Vision, and Natural Language Processing (NLP)
- tasks.
- package: py-datasets
- url: https://huggingface.co/docs/datasets
- versions:
- - {description: 'Hugging Face Datasets is a library for easily accessing and
- sharing datasets for Audio, Computer Vision, and Natural Language Processing
- (NLP) tasks.', markedDefault: false, versionName: 2.18.0_py312}
- - categories: math, deep learning
- defaultVersionName: 2.1.5_py27
- description: Keras is a high-level neural networks API, written in Python and
- capable of running on top of TensorFlow, CNTK, or Theano.
- package: py-keras
- url: http://keras.io
+ - categories: math, numerical library
+ defaultVersionName: 3.9.0
+ description: Collection of Fortran77 subroutines designed to solve large scale
+ eigenvalue problems.
+ package: arpack
+ url: https://github.com/opencollab/arpack-ng
versions:
- - description: Keras is a high-level neural networks API, written in Python
- and capable of running on top of TensorFlow, CNTK, or Theano.
- markedDefault: false
- properties:
- arch: {gpu: 1}
- versionName: 2.0.8_py27
- - description: Keras is a high-level neural networks API, written in Python
- and capable of running on top of TensorFlow, CNTK, or Theano.
- markedDefault: false
- properties:
- arch: {gpu: 1}
- versionName: 2.1.5_py36
- - description: Keras is a high-level neural networks API, written in Python
- and capable of running on top of TensorFlow, CNTK, or Theano.
- markedDefault: false
- properties:
- arch: {gpu: 1}
- versionName: 2.2.4_py27
- - description: Keras is a high-level neural networks API, written in Python
- and capable of running on top of TensorFlow, CNTK, or Theano.
+ - {description: Collection of Fortran77 subroutines designed to solve large
+ scale eigenvalue problems., markedDefault: false, versionName: 3.5.0}
+ - description: Collection of Fortran77 subroutines designed to solve large scale
+ eigenvalue problems.
markedDefault: false
properties:
- arch: {gpu: 1}
- versionName: 2.2.4_py36
- - description: Keras is a high-level neural networks API, written in Python
- and capable of running on top of TensorFlow, CNTK, or Theano.
+ parallel: {mpi: 1}
+ versionName: 3.7.0
+ - description: Collection of Fortran77 subroutines designed to solve large scale
+ eigenvalue problems.
markedDefault: false
properties:
- arch: {gpu: 1}
- versionName: 2.3.1_py36
- - description: Keras is a high-level neural networks API, written in Python
- and capable of running on top of TensorFlow, CNTK, or Theano.
- markedDefault: true
- properties:
- arch: {gpu: 1}
- versionName: 2.1.5_py27
- - categories: math, statistics
- defaultVersionName: 2.9.2_py36
- description: rpy2 is an interface to R running embedded in a Python process.
- package: py-rpy2
- url: https://rpy2.github.io
+ parallel: {mpi: 1}
+ versionName: 3.9.0
+ - categories: math, optimization
+ defaultVersionName: 10.3.0
+ description: Artelys Knitro is an optimization solver for difficult large-scale
+ nonlinear problems.
+ package: knitro
+ url: https://www.artelys.com/en/optimization-tools/knitro
versions:
- - {description: rpy2 is an interface to R running embedded in a Python process.,
- markedDefault: false, versionName: 2.8.6_py27}
- - {description: rpy2 is an interface to R running embedded in a Python process.,
- markedDefault: false, versionName: 2.9.2_py36}
+ - {description: Artelys Knitro is an optimization solver for difficult large-scale
+ nonlinear problems., markedDefault: false, versionName: 12.4.0}
+ - {description: Artelys Knitro is an optimization solver for difficult large-scale
+ nonlinear problems., markedDefault: true, versionName: 10.3.0}
+ - categories: math, machine learning
+ defaultVersionName: 0.4.2_py312
+ description: Simple, safe way to store and distribute tensors.
+ package: py-safetensors
+ url: https://huggingface.co/docs/safetensors
+ versions:
+ - {description: 'Simple, safe way to store and distribute tensors.', markedDefault: false,
+ versionName: 0.4.2_py312}
- categories: math, deep learning
defaultVersionName: 1.5.0.3
description: GPU-accelerated tensor linear algebra library.
@@ -3149,15 +3130,15 @@ software_modules:
properties:
arch: {gpu: 1}
versionName: 1.0.1_py27
- - categories: math, numerical analysis
- defaultVersionName: 4.2.1
- description: GNU Octave is a high-level language primarily intended for numerical
- computations.
- package: octave
- url: https://www.gnu.org/software/octave/
+ - categories: math, numerical library
+ defaultVersionName: 3.1.3
+ description: FlexiBLAS is a BLAS and LAPACK wrapper library with runtime exchangeable
+ backends.
+ package: flexiblas
+ url: https://github.com/mpimd-csc/flexiblas
versions:
- - {description: GNU Octave is a high-level language primarily intended for numerical
- computations., markedDefault: false, versionName: 4.2.1}
+ - {description: FlexiBLAS is a BLAS and LAPACK wrapper library with runtime
+ exchangeable backends., family: blas, markedDefault: false, versionName: 3.1.3}
- categories: math, computational geometry
defaultVersionName: '4.11'
description: A mesh and field I/O library and scientific database.
@@ -3175,14 +3156,22 @@ software_modules:
versions:
- {description: The MPI-IS Mesh Processing Library contains core functions for
manipulating meshes and visualizing them., markedDefault: false, versionName: 0.4_py39}
- - categories: math, machine learning
- defaultVersionName: 0.4.2_py312
- description: Simple, safe way to store and distribute tensors.
- package: py-safetensors
- url: https://huggingface.co/docs/safetensors
+ - categories: math, numerical library
+ defaultVersionName: 3.1.0
+ description: BLIS is a portable software framework for instantiating high-performance
+ BLAS-like dense linear algebra libraries.
+ package: blis
+ url: https://github.com/amd/blis
versions:
- - {description: 'Simple, safe way to store and distribute tensors.', markedDefault: false,
- versionName: 0.4.2_py312}
+ - {description: BLIS is a portable software framework for instantiating high-performance
+ BLAS-like dense linear algebra libraries., family: blas, markedDefault: false,
+ versionName: '2.1'}
+ - {description: BLIS is a portable software framework for instantiating high-performance
+ BLAS-like dense linear algebra libraries., family: blas, markedDefault: false,
+ versionName: 2.2.4}
+ - {description: BLIS is a portable software framework for instantiating high-performance
+ BLAS-like dense linear algebra libraries., family: blas, markedDefault: false,
+ versionName: 3.1.0}
- categories: math, topic modelling
defaultVersionName: 4.2.0_py39
description: Gensim is a Python library for topic modelling, document indexing
@@ -3192,42 +3181,25 @@ software_modules:
versions:
- {description: 'Gensim is a Python library for topic modelling, document indexing
and similarity retrieval with large corpora.', markedDefault: false, versionName: 4.2.0_py39}
- - categories: math, numerical library
- defaultVersionName: 4.0.3
- description: ParMETIS is an MPI-based parallel library that implements a variety
- of algorithms for partitioning unstructured graphs, meshes, and for computing
- fill-reducing orderings of sparse matrices.
- package: parmetis
- url: http://glaros.dtc.umn.edu/gkhome/metis/parmetis/overview
+ - categories: math, symbolic
+ defaultVersionName: 0.12.3_py39
+ description: High-Performance Symbolic Regression in Python and Julia.
+ package: py-pysr
+ url: https://github.com/MilesCranmer/PySR
versions:
- - description: ParMETIS is an MPI-based parallel library that implements a variety
- of algorithms for partitioning unstructured graphs, meshes, and for computing
- fill-reducing orderings of sparse matrices.
- markedDefault: false
- properties:
- parallel: {mpi: 1}
- versionName: 4.0.3
- - categories: math, numerical library
- defaultVersionName: 3.9.0
- description: Collection of Fortran77 subroutines designed to solve large scale
- eigenvalue problems.
- package: arpack
- url: https://github.com/opencollab/arpack-ng
+ - {description: High-Performance Symbolic Regression in Python and Julia., markedDefault: false,
+ versionName: 0.12.3_py39}
+ - categories: math, machine learning
+ defaultVersionName: 2.18.0_py312
+ description: Hugging Face Datasets is a library for easily accessing and sharing
+ datasets for Audio, Computer Vision, and Natural Language Processing (NLP)
+ tasks.
+ package: py-datasets
+ url: https://huggingface.co/docs/datasets
versions:
- - {description: Collection of Fortran77 subroutines designed to solve large
- scale eigenvalue problems., markedDefault: false, versionName: 3.5.0}
- - description: Collection of Fortran77 subroutines designed to solve large scale
- eigenvalue problems.
- markedDefault: false
- properties:
- parallel: {mpi: 1}
- versionName: 3.7.0
- - description: Collection of Fortran77 subroutines designed to solve large scale
- eigenvalue problems.
- markedDefault: false
- properties:
- parallel: {mpi: 1}
- versionName: 3.9.0
+ - {description: 'Hugging Face Datasets is a library for easily accessing and
+ sharing datasets for Audio, Computer Vision, and Natural Language Processing
+ (NLP) tasks.', markedDefault: false, versionName: 2.18.0_py312}
- categories: math, numerical library
defaultVersionName: 2.2.0
description: ScaLAPACK is a library of high-performance linear algebra routines
@@ -3253,68 +3225,37 @@ software_modules:
properties:
parallel: {mpi: 1}
versionName: 2.2.0
- - categories: math, numerical library
- defaultVersionName: 3.1.0
- description: BLIS is a portable software framework for instantiating high-performance
- BLAS-like dense linear algebra libraries.
- package: blis
- url: https://github.com/amd/blis
+ - categories: math, graph computing
+ defaultVersionName: '0.73'
+ description: A tool for computing automorphism groups and canonical forms of
+ graphs.
+ package: bliss
+ url: http://www.tcs.hut.fi/Software/bliss/
versions:
- - {description: BLIS is a portable software framework for instantiating high-performance
- BLAS-like dense linear algebra libraries., family: blas, markedDefault: false,
- versionName: '2.1'}
- - {description: BLIS is a portable software framework for instantiating high-performance
- BLAS-like dense linear algebra libraries., family: blas, markedDefault: false,
- versionName: 2.2.4}
- - {description: BLIS is a portable software framework for instantiating high-performance
- BLAS-like dense linear algebra libraries., family: blas, markedDefault: false,
- versionName: 3.1.0}
+ - {description: A tool for computing automorphism groups and canonical forms
+ of graphs., markedDefault: false, versionName: '0.73'}
- categories: math, numerical library
defaultVersionName: 3.18.5
description: PETSc, the Portable, Extensible Toolkit for Scientific Computation,
is a suite of data structures and routines for the scalable (parallel) solution
of scientific applications modeled by partial differential equations.
package: petsc
- url: http://petsc.org
- versions:
- - description: PETSc is a suite of data structures and routines for the scalable
- (parallel) solution of scientific applications modeled by partial differential
- equations.
- markedDefault: false
- properties:
- parallel: {mpi: 1}
- versionName: 3.10.3
- - description: PETSc, the Portable, Extensible Toolkit for Scientific Computation,
- is a suite of data structures and routines for the scalable (parallel) solution
- of scientific applications modeled by partial differential equations.
- markedDefault: false
- properties:
- parallel: {mpi: 1}
- versionName: 3.18.5
- - categories: math, numerical library
- defaultVersionName: 3.1.3
- description: FlexiBLAS is a BLAS and LAPACK wrapper library with runtime exchangeable
- backends.
- package: flexiblas
- url: https://github.com/mpimd-csc/flexiblas
- versions:
- - {description: FlexiBLAS is a BLAS and LAPACK wrapper library with runtime
- exchangeable backends., family: blas, markedDefault: false, versionName: 3.1.3}
- - categories: math, numerical library
- defaultVersionName: 6.0.4
- description: Software package and libraries for sequential and parallel graph
- partitioning, static mapping and clustering, sequential mesh and hypergraph
- partitioning, and sequential and parallel sparse matrix block ordering.
- package: scotch
- url: http://www.labri.fr/perso/pelegrin/scotch
- versions:
- - description: Software package and libraries for sequential and parallel graph
- partitioning, static mapping and clustering, sequential mesh and hypergraph
- partitioning, and sequential and parallel sparse matrix block ordering.
+ url: http://petsc.org
+ versions:
+ - description: PETSc is a suite of data structures and routines for the scalable
+ (parallel) solution of scientific applications modeled by partial differential
+ equations.
markedDefault: false
properties:
parallel: {mpi: 1}
- versionName: 6.0.4
+ versionName: 3.10.3
+ - description: PETSc, the Portable, Extensible Toolkit for Scientific Computation,
+ is a suite of data structures and routines for the scalable (parallel) solution
+ of scientific applications modeled by partial differential equations.
+ markedDefault: false
+ properties:
+ parallel: {mpi: 1}
+ versionName: 3.18.5
- categories: math, deep learning
defaultVersionName: 9.4.0
description: NVIDIA cuDNN is a GPU-accelerated library of primitives for deep
@@ -3406,6 +3347,31 @@ software_modules:
properties:
arch: {gpu: 1}
versionName: 9.4.0
+ - categories: math, numerical library
+ defaultVersionName: 6.0.4
+ description: Software package and libraries for sequential and parallel graph
+ partitioning, static mapping and clustering, sequential mesh and hypergraph
+ partitioning, and sequential and parallel sparse matrix block ordering.
+ package: scotch
+ url: http://www.labri.fr/perso/pelegrin/scotch
+ versions:
+ - description: Software package and libraries for sequential and parallel graph
+ partitioning, static mapping and clustering, sequential mesh and hypergraph
+ partitioning, and sequential and parallel sparse matrix block ordering.
+ markedDefault: false
+ properties:
+ parallel: {mpi: 1}
+ versionName: 6.0.4
+ - categories: math, numerical library
+ defaultVersionName: 1.2.1
+ description: GNU MPC is a C library for the arithmetic of complex numbers with
+ arbitrarily high precision and correct rounding of the result.
+ package: mpc
+ url: http://www.multiprecision.org/mpc
+ versions:
+ - {description: GNU MPC is a C library for the arithmetic of complex numbers
+ with arbitrarily high precision and correct rounding of the result., markedDefault: false,
+ versionName: 1.2.1}
- categories: math, machine learning
defaultVersionName: 0.22.1_py312
description: The huggingface_hub library allows you to interact with the Hugging
@@ -3493,16 +3459,62 @@ software_modules:
- {description: 'The GLPK (GNU Linear Programming Kit) package is intended for
solving large-scale linear programming (LP), mixed integer programming (MIP),
and other related problems.', markedDefault: false, versionName: '4.63'}
- - categories: math, numerical library
- defaultVersionName: 1.2.1
- description: GNU MPC is a C library for the arithmetic of complex numbers with
- arbitrarily high precision and correct rounding of the result.
- package: mpc
- url: http://www.multiprecision.org/mpc
+ - categories: math, numerical analysis
+ defaultVersionName: R2022b
+ description: MATLAB is a multi-paradigm numerical computing environment and
+ proprietary programming language developed by MathWorks.
+ package: matlab
+ url: https://www.mathworks.com/products/matlab.html
versions:
- - {description: GNU MPC is a C library for the arithmetic of complex numbers
- with arbitrarily high precision and correct rounding of the result., markedDefault: false,
- versionName: 1.2.1}
+ - description: MATLAB is a multi-paradigm numerical computing environment and
+ proprietary programming language developed by MathWorks.
+ help: https://www.sherlock.stanford.edu/docs/software/using/matlab
+ markedDefault: false
+ properties:
+ license: {restricted: 1}
+ versionName: R2017a
+ - description: MATLAB is a multi-paradigm numerical computing environment and
+ proprietary programming language developed by MathWorks.
+ help: https://www.sherlock.stanford.edu/docs/software/using/matlab
+ markedDefault: false
+ properties:
+ license: {restricted: 1}
+ versionName: R2017b
+ - description: MATLAB is a multi-paradigm numerical computing environment and
+ proprietary programming language developed by MathWorks.
+ help: https://www.sherlock.stanford.edu/docs/software/using/matlab
+ markedDefault: false
+ properties:
+ license: {restricted: 1}
+ versionName: R2018a
+ - description: MATLAB is a multi-paradigm numerical computing environment and
+ proprietary programming language developed by MathWorks.
+ help: https://www.sherlock.stanford.edu/docs/software/using/matlab
+ markedDefault: false
+ properties:
+ license: {restricted: 1}
+ versionName: R2019a
+ - description: MATLAB is a multi-paradigm numerical computing environment and
+ proprietary programming language developed by MathWorks.
+ help: https://www.sherlock.stanford.edu/docs/software/using/matlab
+ markedDefault: false
+ properties:
+ license: {restricted: 1}
+ versionName: R2020a
+ - description: MATLAB is a multi-paradigm numerical computing environment and
+ proprietary programming language developed by MathWorks.
+ help: https://www.sherlock.stanford.edu/docs/software/using/matlab
+ markedDefault: false
+ properties:
+ license: {restricted: 1}
+ versionName: R2023b
+ - description: MATLAB is a multi-paradigm numerical computing environment and
+ proprietary programming language developed by MathWorks.
+ help: https://www.sherlock.stanford.edu/docs/software/using/matlab
+ markedDefault: true
+ properties:
+ license: {restricted: 1}
+ versionName: R2022b
- categories: math, statistics
defaultVersionName: '9.4'
description: SAS is a software suite developed by SAS Institute for advanced
@@ -3541,13 +3553,16 @@ software_modules:
- {description: PyWavelets is a free Open Source library for wavelet transforms
in Python., markedDefault: false, versionName: 1.6.0_py312}
- categories: math, numerical library
- defaultVersionName: 2.9.0
- description: FLINT is a C library for doing number theory.
- package: flint
- url: https://flintlib.org/
+ defaultVersionName: 1.6.0
+ description: TetGen provides various features to generate good quality and adaptive
+ tetrahedral meshes suitable for numerical methods, such as finite element
+ or finite volume methods.
+ package: tetgen
+ url: http://wias-berlin.de/software/index.jsp?id=TetGen
versions:
- - {description: FLINT is a C library for doing number theory., markedDefault: false,
- versionName: 2.9.0}
+ - {description: 'TetGen provides various features to generate good quality and
+ adaptive tetrahedral meshes suitable for numerical methods, such as finite
+ element or finite volume methods.', markedDefault: false, versionName: 1.6.0}
- categories: math, deep learning
defaultVersionName: 1.12.0_py39
description: ONNX is a open format to represent deep learning models.
@@ -3560,29 +3575,49 @@ software_modules:
versionName: 1.8.1_py36}
- {description: ONNX is a open format to represent deep learning models., markedDefault: false,
versionName: 1.12.0_py39}
- - categories: math, numerical library
- defaultVersionName: 1.14.3_py27
- description: NumPy is the fundamental package for scientific computing with
- Python.
- package: py-numpy
- url: http://www.numpy.org
+ - categories: math, deep learning
+ defaultVersionName: 2.1.5_py27
+ description: Keras is a high-level neural networks API, written in Python and
+ capable of running on top of TensorFlow, CNTK, or Theano.
+ package: py-keras
+ url: http://keras.io
versions:
- - {description: NumPy is the fundamental package for scientific computing with
- Python., markedDefault: false, versionName: 1.14.3_py36}
- - {description: NumPy is the fundamental package for scientific computing with
- Python., markedDefault: false, versionName: 1.17.2_py36}
- - {description: NumPy is the fundamental package for scientific computing with
- Python., markedDefault: false, versionName: 1.18.1_py36}
- - {description: NumPy is the fundamental package for scientific computing with
- Python., markedDefault: false, versionName: 1.19.2_py36}
- - {description: NumPy is the fundamental package for scientific computing with
- Python., markedDefault: false, versionName: 1.20.3_py39}
- - {description: NumPy is the fundamental package for scientific computing with
- Python., markedDefault: false, versionName: 1.24.2_py39}
- - {description: NumPy is the fundamental package for scientific computing with
- Python., markedDefault: false, versionName: 1.26.3_py312}
- - {description: NumPy is the fundamental package for scientific computing with
- Python., markedDefault: true, versionName: 1.14.3_py27}
+ - description: Keras is a high-level neural networks API, written in Python
+ and capable of running on top of TensorFlow, CNTK, or Theano.
+ markedDefault: false
+ properties:
+ arch: {gpu: 1}
+ versionName: 2.0.8_py27
+ - description: Keras is a high-level neural networks API, written in Python
+ and capable of running on top of TensorFlow, CNTK, or Theano.
+ markedDefault: false
+ properties:
+ arch: {gpu: 1}
+ versionName: 2.1.5_py36
+ - description: Keras is a high-level neural networks API, written in Python
+ and capable of running on top of TensorFlow, CNTK, or Theano.
+ markedDefault: false
+ properties:
+ arch: {gpu: 1}
+ versionName: 2.2.4_py27
+ - description: Keras is a high-level neural networks API, written in Python
+ and capable of running on top of TensorFlow, CNTK, or Theano.
+ markedDefault: false
+ properties:
+ arch: {gpu: 1}
+ versionName: 2.2.4_py36
+ - description: Keras is a high-level neural networks API, written in Python
+ and capable of running on top of TensorFlow, CNTK, or Theano.
+ markedDefault: false
+ properties:
+ arch: {gpu: 1}
+ versionName: 2.3.1_py36
+ - description: Keras is a high-level neural networks API, written in Python
+ and capable of running on top of TensorFlow, CNTK, or Theano.
+ markedDefault: true
+ properties:
+ arch: {gpu: 1}
+ versionName: 2.1.5_py27
- categories: math, optimization
defaultVersionName: 11.0.2
description: The Gurobi Optimizer is a commercial optimization solver for mathematical
@@ -3674,44 +3709,32 @@ software_modules:
properties:
arch: {gpu: 1}
versionName: 12.1.0_py39
- - categories: math, optimization
- defaultVersionName: 10.3.0
- description: Artelys Knitro is an optimization solver for difficult large-scale
- nonlinear problems.
- package: knitro
- url: https://www.artelys.com/en/optimization-tools/knitro
+ - categories: math, numerical library
+ defaultVersionName: 2.9.0
+ description: FLINT is a C library for doing number theory.
+ package: flint
+ url: https://flintlib.org/
versions:
- - {description: Artelys Knitro is an optimization solver for difficult large-scale
- nonlinear problems., markedDefault: false, versionName: 12.4.0}
- - {description: Artelys Knitro is an optimization solver for difficult large-scale
- nonlinear problems., markedDefault: true, versionName: 10.3.0}
- - categories: math, machine learning
- defaultVersionName: 0.19.1_py27
- description: Scikit-learn is a free software machine learning library for the
- Python programming language.
- package: py-scikit-learn
- url: http://scikit-learn.org
+ - {description: FLINT is a C library for doing number theory., markedDefault: false,
+ versionName: 2.9.0}
+ - categories: math, numerical library
+ defaultVersionName: 3.18.5_py39
+ description: Python bindings for PETSc, the Portable, Extensible Toolkit for
+ Scientific Computation.
+ package: py-petsc4py
+ url: http://petsc.org
versions:
- - {description: Scikit-learn is a free software machine learning library for
- the Python programming language., markedDefault: false, versionName: 0.19.1_py36}
- - {description: Scikit-learn is a free software machine learning library for
- the Python programming language., markedDefault: false, versionName: 0.24.2_py36}
- - {description: Scikit-learn is a free software machine learning library for
- the Python programming language., markedDefault: false, versionName: 1.0.2_py39}
- - {description: Scikit-learn is a free software machine learning library for
- the Python programming language., markedDefault: false, versionName: 1.3.2_py39}
- - {description: Scikit-learn is a free software machine learning library for
- the Python programming language., markedDefault: false, versionName: 1.5.1_py312}
- - {description: Scikit-learn is a free software machine learning library for
- the Python programming language., markedDefault: true, versionName: 0.19.1_py27}
- - categories: math, symbolic
- defaultVersionName: 0.12.3_py39
- description: High-Performance Symbolic Regression in Python and Julia.
- package: py-pysr
- url: https://github.com/MilesCranmer/PySR
+ - {description: 'Python bindings for PETSc, the Portable, Extensible Toolkit
+ for Scientific Computation.', markedDefault: false, versionName: 3.18.5_py39}
+ - categories: math, numerical library
+ defaultVersionName: 2.0.8_py36
+ description: gmpy2 is a C-coded Python extension module that supports multiple-precision
+ arithmetic.
+ package: py-gmpy2
+ url: https://gmpy2.readthedocs.io/
versions:
- - {description: High-Performance Symbolic Regression in Python and Julia., markedDefault: false,
- versionName: 0.12.3_py39}
+ - {description: gmpy2 is a C-coded Python extension module that supports multiple-precision
+ arithmetic., markedDefault: false, versionName: 2.0.8_py36}
- categories: math, statistics
defaultVersionName: '15'
description: Stata is a complete, integrated statistical software package that
@@ -3754,16 +3777,13 @@ software_modules:
properties:
license: {restricted: 1}
versionName: '15'
- - categories: math, optimization
- defaultVersionName: 2.10.0_py39
- description: Optuna is an automatic hyperparameter optimization software framework,
- particularly designed for machine learning.
- package: py-optuna
- url: https://optuna.readthedocs.io/
+ - categories: math, numerical library
+ defaultVersionName: 3.18.2_py39
+ description: Python bindings for SLEPc.
+ package: py-slepc4py
+ url: https://slepc.upv.es/
versions:
- - {description: 'Optuna is an automatic hyperparameter optimization software
- framework, particularly designed for machine learning.', markedDefault: false,
- versionName: 2.10.0_py39}
+ - {description: Python bindings for SLEPc., markedDefault: false, versionName: 3.18.2_py39}
- categories: math, numerical library
defaultVersionName: '2019'
description: Intel Math Kernel Library (Intel MKL) is a library of optimized
@@ -7179,7 +7199,7 @@ software_modules:
that gives you the power to speed up your applications with high performance
functions written directly in Python.., markedDefault: true, versionName: 0.35.0_py27}
- categories: devel, language
- defaultVersionName: 1.72.0
+ defaultVersionName: 1.81.0
description: A language empowering everyone to build reliable and efficient
software.
package: rust
@@ -7193,6 +7213,8 @@ software_modules:
software., markedDefault: false, versionName: 1.63.0}
- {description: A language empowering everyone to build reliable and efficient
software., markedDefault: false, versionName: 1.72.0}
+ - {description: A language empowering everyone to build reliable and efficient
+ software., markedDefault: false, versionName: 1.81.0}
- categories: devel, data
defaultVersionName: 0.13.3
description: Hiredis is a minimalistic C client library for the Redis database.
diff --git a/src/docs/software/updates.xml b/src/docs/software/updates.xml
index 398dbc6f9..93df53894 100644
--- a/src/docs/software/updates.xml
+++ b/src/docs/software/updates.xml
@@ -5,6 +5,33 @@
Sherlock software update feed
https://www.sherlock.stanford.edu/docs/software/list
+
+ New module: math/py-flash-attention version 2.6.3_py312
+ Fast and memory-efficient exact attention
+ https://github.com/Dao-AILab/flash-attention
+ https://www.sherlock.stanford.edu/docs/software/list/?add:v=2.6.3_py312#py-flash-attention
+ math, deep learning
+ kilian@stanford.edu (Kilian Cavalotti)
+ Fri, 4 Oct 2024 12:08:23 -0700
+
+
+ New module: math/py-evaluate version 0.4.3_py312
+ Hugging Face Evaluate is a library for easily evaluating machine learning models and datasets.
+ https://huggingface.co/docs/evaluate
+ https://www.sherlock.stanford.edu/docs/software/list/?add:v=0.4.3_py312#py-evaluate
+ math, machine learning
+ kilian@stanford.edu (Kilian Cavalotti)
+ Thu, 3 Oct 2024 09:11:43 -0700
+
+
+ New version: devel/rust version 1.81.0
+ A language empowering everyone to build reliable and efficient software.
+ https://www.rust-lang.org/
+ https://www.sherlock.stanford.edu/docs/software/list/?add:v=1.81.0#rust
+ devel, language
+ kilian@stanford.edu (Kilian Cavalotti)
+ Wed, 2 Oct 2024 12:00:04 -0700
+ New version: devel/ucx version 1.17.0UCX is a communication library implementing high-performance messaging for MPI/PGAS frameworks.