NAMESPACE

# Generated by roxygen2: do not edit by hand

export(Skilift)
export(add_patient_to_distributions)
export(arrow_temp)
export(bw_temp)
export(convert_signature_meta_json)
export(cov2abs)
export(cov2arrow_pgv)
export(cov2bw_pgv)
export(create_distributions)
export(create_mutations_catalog_json)
export(create_oncotable)
export(create_ppfit_json)
export(dlrs)
export(dt2json_mut)
export(create_filtered_events)
export(lift_filtered_events)
export(genome_temp)
export(indels_sigprofiler2meta)
export(load_distributions)
export(meta_data_json)
export(mutations_temp)
export(oncotable)
export(parse_vcf_strelka2)
export(ppfit_temp)
export(read_meta_data_json)
export(sage_count)
export(sage_qc)
export(sbs_deconstructSigs2meta)
export(sbs_sigprofiler2meta)
export(sigprofiler_decomposed_probs_json)
export(strelka2counts)
export(strelka_qc)
export(subsample_hetsnps)
export(walks_temp)
export(write_distributions_to_json)
export(write_signature_jsons)
import(R6)
import(data.table)
import(httr)
import(parallel)
importFrom(gGnome,parse.js.seqlengths)
importFrom(gGnome,refresh)
importFrom(gUtils,dt2gr)
importFrom(jsonlite,fromJSON)
importFrom(jsonlite,toJSON)
importFrom(magrittr,`%>%`)
useDynLib(Skilift, .registration=TRUE)
export(create_filtered_events)
export(lift_filtered_events)