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Welcome

This capstone project will allow you not only to build, configure and use plate templates to define experimental plate sets, but also to parse the output of experimental equipment, inspect the results and generate CSV files for exporting data.

The project has been divided into different modules:

• Plate Editor
• Output Parser
• Result Analysis
• User Administration

Plate Editor

In the plate editor, the user will be able to:

• Create Plate Templates
• Retrieve saved templates
• Import a list of compounds to be used in an experimental plate set
• Build Plate Sets for an experiment
• Assign compounds and dosage information to plate sets
• Export data generated into CSV files

Output Parser

The objective of this module is to be able to read from any equipment in the market that produce CSV files. For that, the user will be able to:

• Import CSV files with the data
• Create parsing configurations for any equipment
• Retrieve saved configurations
• Export data of any equipment in one well known format
• Match the results to experiments created in the Plate Editor section

Results

A basic QA/QC can be done with the results parsed, with basic visualizations. Results can be saved for later retrieval.

User Administration

The system supports three different roles:

• Super Administrator
• Administrator
• Scientist

Scientists

The Scientist will be able to store/retrieve different set of information such as plate templates, experiments, parsing configurations and results.

Administrators

Will be able to create/modify/delete users plus all the scientists capabilities.

Super Administrators

The purpose of this role is only for developers, being not only administrators of the system, but also having access to the console to execute scripts directly on the server.