Archr to Seurat for trajectoires analysis

[A-legac45]

Hello IS it possible to convert a geneexpressionmatices from multiomic experiment preprocess by Archr to Seurat ?

Thanks

[rootze]

@A-legac45 Assuming the geneexpressionmatices you mentioned is the gene score activity imputed by ArchR using chromatin activity, yes, you can convert that gsm <- getGeneScoreMatrix(ArchRProject = proj, SeuratObject = seurat_atac)