update

tanghaibao · Aug 10, 2024 · 4f33876 · 4f33876
1 parent 1db2b5b
commit 4f33876
Showing 1 changed file with 2 additions and 1 deletion.
diff --git a/jcvi/graphics/landscape.py b/jcvi/graphics/landscape.py
@@ -473,11 +473,12 @@ def read_roi(roi_file: str) -> Dict[str, List[str]]:
     roi = defaultdict(list)
     with open(roi_file, encoding="utf-8") as fp:
         for row in fp:
-            filename, region = row.strip().split(",")
+            filename, region = row.strip().split(",")[:2]
             chrom, start_end = region.split(":", 1)
             start, end = start_end.split("-")
             region = (chrom, (int(start) + int(end)) // 2)
             roi[filename].append(region)
+    logger.info("Read %d regions of interest", len(roi))
     return roi