diff --git a/jcvi/apps/script.py b/jcvi/apps/script.py deleted file mode 100644 index 28972abe..00000000 --- a/jcvi/apps/script.py +++ /dev/null @@ -1,112 +0,0 @@ -#!/usr/bin/env python -# -*- coding: UTF-8 -*- - - -import sys -import logging - -from jcvi.formats.base import write_file -from jcvi.apps.base import OptionParser - - -default_template = """ -\"\"\" - -\"\"\" - -import sys - -{} -from jcvi.apps.base import OptionParser, ActionDispatcher - - -def main(): - - actions = ( - ('app', ''), - ) - p = ActionDispatcher(actions) - p.dispatch(globals()) - -{} - -if __name__ == '__main__': - main() -""" - -default_imports = "" - -graphic_imports = """ -from jcvi.graphics.base import plt, savefig, normalize_axes""" - -default_app = """ -def app(args): - \"\"\" - %prog app datafile - - \"\"\" - p = OptionParser(app.__doc__) - opts, args = p.parse_args(args) - - if len(args) != 1: - sys.exit(not p.print_help()) -""" - -graphic_app = """ -def app(args): - \"\"\" - %prog app datafile - - \"\"\" - p = OptionParser(app.__doc__) - opts, args, iopts = p.set_image_options(args) - - if len(args) != 1: - sys.exit(not p.print_help()) - - datafile, = args - pf = datafile.rsplit(".", 1)[0] - fig = plt.figure(1, (iopts.w, iopts.h)) - root = fig.add_axes([0, 0, 1, 1]) - - normalize_axes(root) - - image_name = pf + "." + iopts.format - savefig(image_name, dpi=iopts.dpi, iopts=iopts) -""" - - -def main(): - """ - %prog scriptname.py - - create a minimal boilerplate for a new script - """ - p = OptionParser(main.__doc__) - p.add_option( - "-g", - "--graphic", - default=False, - action="store_true", - help="Create boilerplate for a graphic script", - ) - - opts, args = p.parse_args() - if len(args) != 1: - sys.exit(not p.print_help()) - - (script,) = args - imports = graphic_imports if opts.graphic else default_imports - app = graphic_app if opts.graphic else default_app - template = default_template.format(imports, app) - write_file(script, template) - - message = "template writes to `{0}`".format(script) - if opts.graphic: - message = "graphic " + message - message = message[0].upper() + message[1:] - logging.debug(message) - - -if __name__ == "__main__": - main()