Skip to content

Commit

Permalink
Update README.md
Browse files Browse the repository at this point in the history
  • Loading branch information
changmt committed Feb 17, 2016
1 parent 299589b commit f0d57f7
Showing 1 changed file with 4 additions and 0 deletions.
4 changes: 4 additions & 0 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -44,9 +44,13 @@ Command to run hotspot algorithm on genes listed in file genes_of_interest.txt:

#####Contents:
**[ Required ]** `hotspot_algo.R` - R script to execute hotspot detection algorithm

**[ Required ]** `hotspot_algo.Rdata` - Rdata object with necessary files for algorithm (mutability, expression/germline filters, etc)

**[ Required ]** `funcs.R` - R script of functions necessary for proper execution of hotspot_algo.R

`genes_of_interest.txt` - Sample list of genes for hotspot detection

`minimalist_test_maf.txt` - minimalist MAF needed from maf2maf. [mskcc/maf2maf](https://github.com/mskcc/vcf2maf)

#####Notes:
Expand Down

0 comments on commit f0d57f7

Please sign in to comment.