NOTE: WORKFLOWS FROM THIS REPOSITORY HAVE BEEN MIGRATED TO THE PUBLIC HEALTH BIOINFORMATICS (PHB) REPOSITORY. FUTURE DEVELOPMENTS AND UPDATES FOR THESE WORKFLOWS WILL OCCUR IN https://github.com/theiagen/public_health_bioinformatics.
Bioinformatics workflows for genomic characteriation, submission preparation, and genomic epidemiology of bacterial pathogens of concern.
More information about the steps undertaken in these workflows is available via the Theiagen Public Resources Documentation.
This repository and the workflows within are in the early stages of development. We recommend usage of our stable version releases as the main and development branches are subject to routine updates. Please contact [email protected] if you would like to be added to our PHBG mailing list and receive updates and announcements regarding any resource associated with this repository.